Click here to switch to the map view.

The map label for this gene is rpfG [H]

Identifier: 126175287

GI number: 126175287

Start: 3609946

End: 3611211

Strand: Reverse

Name: rpfG [H]

Synonym: Sbal_3086

Alternate gene names: 126175287

Gene position: 3611211-3609946 (Counterclockwise)

Preceding gene: 126175290

Following gene: 126175285

Centisome position: 70.43

GC content: 46.13

Gene sequence:

>1266_bases
ATGGCGATATCACTTAGACGTGGCGTAGCTAAATTGGCTACCGCGTCCTTGGGGACAGCAGCGGCACTTCCCCATTGGCG
ACGTTTGATTTTTGAACGTCTATTTGGCTTTCTTGCGCTTCTCTGCGTGCCCGTATATATCACCAGCGTGTATTTATGTG
TCATCGCCGATCTTTGGTCTATGGTGGTATTCGATACGCTGGCTTATCTTTTTTTACTGTTTTTGCTGTATTTTCCTAAG
CTTGCTGATAGCACGCGTTTTGGCTGTGGTTGTTTGTTAGCGTTTGCTATCGGCGTTGGTTTTTTGATTGCGATTGGTCC
ATCGGGTGCGGGGTTCATCTGGTTATTTATCTTTCCGCCATTAGTTGGCATTTTCTTAGGAAGTCGCGCGAGCTTATATG
CCCAATATTTGAATGGGATGAGTTTGGTACTGATTGGGCTTGCCTATCACTTTGGCTGGTTAAACTGGCCTGATATTCAC
GGTTACAGTTTGGGTATTTGGGCCGTTGTCGTGGTCAATTTTATTGTAACCAATGCCATGTTGACGCTAACCATCACTTA
CTTATTAGGTAAGTTGGCGGATTCACTCGATTCAACCTTAGCCTCACGCCAAGCGACTGTATTAGGTTTAGCCAAACTTG
CCGAATACAGAGACAACGAAACGGGCGCGCACTTATTACGTATGCGGCAGTATTCAAAAATGCTCGCGGCGCAGCGACTG
CAGGCCGACAATCCTCCGGCTGAATTGAACGATGATTTTATTCAAGATATTAGTCTATCGGCCATTTTGCATGACATAGG
TAAAGTCGGTATTGCCGATGCTATTCTGCTCAAACCGGGTAAATTAACCCCGCAGGAGTTTGAGCAGATCAAAGCCCACC
CTGTGATTGGTGGCCAAGTGTTACGCAGTTTGTTGGAATATGCGCCCCAATGTACTTTTATTCAGATGGGCCAAGATATC
GCTTCGGGTCACCATGAAAAGTGGGATGGTAGTGGTTACCCCTTAGGGTTGAAAGGTGAGGATATTCCGCTTTCGGCGCG
CATCGTTGCCTTGGTGGATGTCTATGATGCACTCACTTCACCGCGATGTTATAAGCGACCCTTTAGTCACCAAGAAGCCA
TCGATTTAATGATTGAAGGCAAAGGTAAGCATTTCGATCCTGAATTAGTCGATTGTTTTATGGCAATTCATCAGGAGTTT
GAAGTGTTATCTAAGGCATCGCTGGATGATGCTTATCAGCCTATGGCGCAGCCTACTATGGTTTAG

Upstream 100 bases:

>100_bases
ATTCGCACCCTTTAGTTTATTAACTCATGTTCATTAGCTTAGGTTCATAAGATCAGCTTCATTAGCTCATAGCGGGAATG
CAACATAAGAGGATTTTCCC

Downstream 100 bases:

>100_bases
CGACTCGTGTTTTTAATCATGTTTGAAATAGAAATCGTGTTTTGAAACCATGTCCTGAAAGCATGCTATTGAAATAGGAC
TAGGCCTTGAAAATACAGAA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MAISLRRGVAKLATASLGTAAALPHWRRLIFERLFGFLALLCVPVYITSVYLCVIADLWSMVVFDTLAYLFLLFLLYFPK
LADSTRFGCGCLLAFAIGVGFLIAIGPSGAGFIWLFIFPPLVGIFLGSRASLYAQYLNGMSLVLIGLAYHFGWLNWPDIH
GYSLGIWAVVVVNFIVTNAMLTLTITYLLGKLADSLDSTLASRQATVLGLAKLAEYRDNETGAHLLRMRQYSKMLAAQRL
QADNPPAELNDDFIQDISLSAILHDIGKVGIADAILLKPGKLTPQEFEQIKAHPVIGGQVLRSLLEYAPQCTFIQMGQDI
ASGHHEKWDGSGYPLGLKGEDIPLSARIVALVDVYDALTSPRCYKRPFSHQEAIDLMIEGKGKHFDPELVDCFMAIHQEF
EVLSKASLDDAYQPMAQPTMV

Sequences:

>Translated_421_residues
MAISLRRGVAKLATASLGTAAALPHWRRLIFERLFGFLALLCVPVYITSVYLCVIADLWSMVVFDTLAYLFLLFLLYFPK
LADSTRFGCGCLLAFAIGVGFLIAIGPSGAGFIWLFIFPPLVGIFLGSRASLYAQYLNGMSLVLIGLAYHFGWLNWPDIH
GYSLGIWAVVVVNFIVTNAMLTLTITYLLGKLADSLDSTLASRQATVLGLAKLAEYRDNETGAHLLRMRQYSKMLAAQRL
QADNPPAELNDDFIQDISLSAILHDIGKVGIADAILLKPGKLTPQEFEQIKAHPVIGGQVLRSLLEYAPQCTFIQMGQDI
ASGHHEKWDGSGYPLGLKGEDIPLSARIVALVDVYDALTSPRCYKRPFSHQEAIDLMIEGKGKHFDPELVDCFMAIHQEF
EVLSKASLDDAYQPMAQPTMV
>Mature_420_residues
AISLRRGVAKLATASLGTAAALPHWRRLIFERLFGFLALLCVPVYITSVYLCVIADLWSMVVFDTLAYLFLLFLLYFPKL
ADSTRFGCGCLLAFAIGVGFLIAIGPSGAGFIWLFIFPPLVGIFLGSRASLYAQYLNGMSLVLIGLAYHFGWLNWPDIHG
YSLGIWAVVVVNFIVTNAMLTLTITYLLGKLADSLDSTLASRQATVLGLAKLAEYRDNETGAHLLRMRQYSKMLAAQRLQ
ADNPPAELNDDFIQDISLSAILHDIGKVGIADAILLKPGKLTPQEFEQIKAHPVIGGQVLRSLLEYAPQCTFIQMGQDIA
SGHHEKWDGSGYPLGLKGEDIPLSARIVALVDVYDALTSPRCYKRPFSHQEAIDLMIEGKGKHFDPELVDCFMAIHQEFE
VLSKASLDDAYQPMAQPTMV

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 46379; Mature: 46248

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure 
AISLRRGVAKLATASLGTAAALPHWRRLIFERLFGFLALLCVPVYITSVYLCVIADLWS
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVVFDTLAYLFLLFLLYFPKLADSTRFGCGCLLAFAIGVGFLIAIGPSGAGFIWLFIFPP
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCEEHHHHHHH
LVGIFLGSRASLYAQYLNGMSLVLIGLAYHFGWLNWPDIHGYSLGIWAVVVVNFIVTNAM
HHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LTLTITYLLGKLADSLDSTLASRQATVLGLAKLAEYRDNETGAHLLRMRQYSKMLAAQRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
QADNPPAELNDDFIQDISLSAILHDIGKVGIADAILLKPGKLTPQEFEQIKAHPVIGGQV
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCHHH
LRSLLEYAPQCTFIQMGQDIASGHHEKWDGSGYPLGLKGEDIPLSARIVALVDVYDALTS
HHHHHHHCCCCCHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PRCYKRPFSHQEAIDLMIEGKGKHFDPELVDCFMAIHQEFEVLSKASLDDAYQPMAQPTM
CHHHCCCCCHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]