| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175262
Identifier: 126175262
GI number: 126175262
Start: 3580654
End: 3581796
Strand: Reverse
Name: 126175262
Synonym: Sbal_3060
Alternate gene names: NA
Gene position: 3581796-3580654 (Counterclockwise)
Preceding gene: 126175269
Following gene: 126175261
Centisome position: 69.86
GC content: 47.51
Gene sequence:
>1143_bases ATGCAAAGACGCAATTTTTTAAAAAGTGCGGCTATTTTGTCGACTGCGGGGTTTATCACGCCGGTACTGGCATCTTCCTC TAAATCGAGTGTCGTTGAACCTAGCGCAAGCGATGGACGTCGCCGTTTTATCTTAACCAACACTTACCATCTTGTTGCTC CTGAAGGCTCTGAGGGCGTGGTTAAGTTGTGGATCCCTTTGCCTGAAGACACGCAATTCCAACGGGTCAGTAAGCTTGAT TTCACCGGCAGTTTTAAAGATGCCTATATCAGCTCAAACAACAGTTATGGCGCCAAAACGCTGTTTGCGACTTGGCCAGA TGCCAAAGACAGCATGACAATGACCGTTGAGTTAGACATTGAAACCTTAGATTGGGAACCGCTTAAAAGCGGCGCTTTAG CTCACTATCGCACACCAACACAGATCCACTATCCTGCAGATGTAGAACGTTATTTACTGCCGACTAAACATATGCCGATT AACGGTATTGTGAAGCAAACGGCGGATAAAATCGTCGGCAGCGAAACTGAGCCACTGAAACAAGCGCGACTGATATACCT TTGGGTTAGCGCCAATATGTTCCGCGACAATAGTGTGATTGGCTGTGGTACAGGTGATGTGGCCAGCATTTTAGAAAGTG GCAAGTTAGGCGGTAAGTGTACCGACATTAACTCGGTATTTGTGGCGTTAATGCGCGCTGTGGGTATCCCTGCCCGTGAA ATGTTTGGCATTCGCTTAGGTCAGGCGATCAAGATGGGTCATTATTCTAAAAAGGCCTTTGGGAGCGCCGATGACAAAGG AGCTGCCGATGTCAGTGGCGGTCAACATTGCCGCGCTATGTTCTATTTAGCGGGTTATGGTTGGTTGCCCGCCGATCCTG CCGATGTGACTAAAATGCGCTTAACGGAGAAAAAAGAACACAGCGATCCTGCGGTTCAGGCGGTGAATGATTACCTCTTT GGTAACTGGGAAATGAACTGGGTTGGCTTTAACTATGGTCGCGACTTTGATTTATTCCCTGAAGCCGAGCAGACACCACT GAATAACTTTGGTTATCCGTATGCGGAAGTCGATGGCGATCCTGTGAATTATTATGAACCAAAAGTGTTTGCCTATGACT ACCAGTCAACCGAACAACGCTAA
Upstream 100 bases:
>100_bases ATTGGGCTTGATTGCTGCATAGGGCCATAGAACCTATAATCTTGCTCTGTGATGTTGAGTTCTCTTCTTTCTAACATGAT CCAATAAAAGGAATGTCATA
Downstream 100 bases:
>100_bases GGGACTTTTAGCGACGATGGCCGCCGCAGTGATTGCTGCGGTTGCTTCAAGCCTATGCTGTATTGCACCGCTTATTTATT TGGTGTTCGGGGTGTCGGCC
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MQRRNFLKSAAILSTAGFITPVLASSSKSSVVEPSASDGRRRFILTNTYHLVAPEGSEGVVKLWIPLPEDTQFQRVSKLD FTGSFKDAYISSNNSYGAKTLFATWPDAKDSMTMTVELDIETLDWEPLKSGALAHYRTPTQIHYPADVERYLLPTKHMPI NGIVKQTADKIVGSETEPLKQARLIYLWVSANMFRDNSVIGCGTGDVASILESGKLGGKCTDINSVFVALMRAVGIPARE MFGIRLGQAIKMGHYSKKAFGSADDKGAADVSGGQHCRAMFYLAGYGWLPADPADVTKMRLTEKKEHSDPAVQAVNDYLF GNWEMNWVGFNYGRDFDLFPEAEQTPLNNFGYPYAEVDGDPVNYYEPKVFAYDYQSTEQR
Sequences:
>Translated_380_residues MQRRNFLKSAAILSTAGFITPVLASSSKSSVVEPSASDGRRRFILTNTYHLVAPEGSEGVVKLWIPLPEDTQFQRVSKLD FTGSFKDAYISSNNSYGAKTLFATWPDAKDSMTMTVELDIETLDWEPLKSGALAHYRTPTQIHYPADVERYLLPTKHMPI NGIVKQTADKIVGSETEPLKQARLIYLWVSANMFRDNSVIGCGTGDVASILESGKLGGKCTDINSVFVALMRAVGIPARE MFGIRLGQAIKMGHYSKKAFGSADDKGAADVSGGQHCRAMFYLAGYGWLPADPADVTKMRLTEKKEHSDPAVQAVNDYLF GNWEMNWVGFNYGRDFDLFPEAEQTPLNNFGYPYAEVDGDPVNYYEPKVFAYDYQSTEQR >Mature_380_residues MQRRNFLKSAAILSTAGFITPVLASSSKSSVVEPSASDGRRRFILTNTYHLVAPEGSEGVVKLWIPLPEDTQFQRVSKLD FTGSFKDAYISSNNSYGAKTLFATWPDAKDSMTMTVELDIETLDWEPLKSGALAHYRTPTQIHYPADVERYLLPTKHMPI NGIVKQTADKIVGSETEPLKQARLIYLWVSANMFRDNSVIGCGTGDVASILESGKLGGKCTDINSVFVALMRAVGIPARE MFGIRLGQAIKMGHYSKKAFGSADDKGAADVSGGQHCRAMFYLAGYGWLPADPADVTKMRLTEKKEHSDPAVQAVNDYLF GNWEMNWVGFNYGRDFDLFPEAEQTPLNNFGYPYAEVDGDPVNYYEPKVFAYDYQSTEQR
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002931 [H]
Pfam domain/function: PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 42205; Mature: 42205
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRNFLKSAAILSTAGFITPVLASSSKSSVVEPSASDGRRRFILTNTYHLVAPEGSEGV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEEEEEEECCCCCCCE VKLWIPLPEDTQFQRVSKLDFTGSFKDAYISSNNSYGAKTLFATWPDAKDSMTMTVELDI EEEEEECCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEE ETLDWEPLKSGALAHYRTPTQIHYPADVERYLLPTKHMPINGIVKQTADKIVGSETEPLK EECCCCCCCCCCEEECCCCCEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC QARLIYLWVSANMFRDNSVIGCGTGDVASILESGKLGGKCTDINSVFVALMRAVGIPARE CCEEEEEEEECCEECCCCEEECCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCHHH MFGIRLGQAIKMGHYSKKAFGSADDKGAADVSGGQHCRAMFYLAGYGWLPADPADVTKMR HHHHHHCCHHHCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH LTEKKEHSDPAVQAVNDYLFGNWEMNWVGFNYGRDFDLFPEAEQTPLNNFGYPYAEVDGD HHHHHCCCCHHHHHHHHHEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCC PVNYYEPKVFAYDYQSTEQR CCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MQRRNFLKSAAILSTAGFITPVLASSSKSSVVEPSASDGRRRFILTNTYHLVAPEGSEGV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEEEEEEECCCCCCCE VKLWIPLPEDTQFQRVSKLDFTGSFKDAYISSNNSYGAKTLFATWPDAKDSMTMTVELDI EEEEEECCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEE ETLDWEPLKSGALAHYRTPTQIHYPADVERYLLPTKHMPINGIVKQTADKIVGSETEPLK EECCCCCCCCCCEEECCCCCEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC QARLIYLWVSANMFRDNSVIGCGTGDVASILESGKLGGKCTDINSVFVALMRAVGIPARE CCEEEEEEEECCEECCCCEEECCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCHHH MFGIRLGQAIKMGHYSKKAFGSADDKGAADVSGGQHCRAMFYLAGYGWLPADPADVTKMR HHHHHHCCHHHCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH LTEKKEHSDPAVQAVNDYLFGNWEMNWVGFNYGRDFDLFPEAEQTPLNNFGYPYAEVDGD HHHHHCCCCHHHHHHHHHEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCC PVNYYEPKVFAYDYQSTEQR CCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]