| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175252
Identifier: 126175252
GI number: 126175252
Start: 3572092
End: 3572916
Strand: Reverse
Name: 126175252
Synonym: Sbal_3050
Alternate gene names: NA
Gene position: 3572916-3572092 (Counterclockwise)
Preceding gene: 126175253
Following gene: 126175251
Centisome position: 69.68
GC content: 44.97
Gene sequence:
>825_bases ATGACCGATCCAAATGTGACAAGCTTAAATATGACAGAGCTAAATAGCGGCATTTATTACGGCACAGTATCCCACAGCCG TTTTACGCCGATTAAACATAGTTTTAGTTATGCAATGGCGCTGCTGGCGATTGACTTAGATGAAGTCGACAAGATCAGTG CCATGGGGCGAGTTTTTGCCAGTCAGCGCCGCGCTTTACTGAGATTTAATCCGAGAGACTATTTAACTTCTTTTACGACT AAATCCAATAATAGCGGTGAAGTGGCTGTTGCCGATCCGAGCGCCGCGGCACTTAAGAGTCGAGTGCTGGCGCAAGTGGC CGAGTTAGGTGCTGATAAGCTTTGCGACCGAGTCTTGTTTGTGGGGCAGATCCGTCATTTTGGCGTGTATTTCAGCCCAG TAAATTTCTACTTTTGTTATCAAGATAAAACGCCTTTATACATGTTGGCCGAGGTGAGTAACACGCCTTGGGATCAACGC CATTGCTATTTAGTGGATGTAGCCGCGCCCAAACCTTCTGACAAAGTGTTTCACGTTTCACCCTTTATGACCCTCGATAT GCGTTATCTCTGGCATGTGGCTGCGCCGAGTGAAGACTTAAATATTGGTATTGAAAACAAGTCGATGCAAGAGAATGGTA AAAAACTGTTTAATGCCAATCTAATGATGAAACGCCAACCAATCACGGCGGCCAATTTACGGACGCTTTTATTTCGCTTT CCTTTTATGACTCTCAAGATTTTCTTCGGGATTTATTGGCAAGCGCTGAAACTCTTTTTCAAACGTGTGCCTTTTGTGCC GCATCCAGCTCAGATGGAGAAATAA
Upstream 100 bases:
>100_bases AAAATCATACCCATTTTGCTGGAGCCTATTGGCACAATGGTTTTCATGAAGATGGCGTTCGCAGTGCACTGGATGTGTGT GCCCATTTTGGTGTCAGCCT
Downstream 100 bases:
>100_bases CATGGAAAATACTGCTTCGCAAACCTCAGTTGCTACAGGGAAACTGCCCGACAGTATTGCGCGTAAAGTCTTGCTTAAGG CGCTGGAAAGCCTGCCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTDPNVTSLNMTELNSGIYYGTVSHSRFTPIKHSFSYAMALLAIDLDEVDKISAMGRVFASQRRALLRFNPRDYLTSFTT KSNNSGEVAVADPSAAALKSRVLAQVAELGADKLCDRVLFVGQIRHFGVYFSPVNFYFCYQDKTPLYMLAEVSNTPWDQR HCYLVDVAAPKPSDKVFHVSPFMTLDMRYLWHVAAPSEDLNIGIENKSMQENGKKLFNANLMMKRQPITAANLRTLLFRF PFMTLKIFFGIYWQALKLFFKRVPFVPHPAQMEK
Sequences:
>Translated_274_residues MTDPNVTSLNMTELNSGIYYGTVSHSRFTPIKHSFSYAMALLAIDLDEVDKISAMGRVFASQRRALLRFNPRDYLTSFTT KSNNSGEVAVADPSAAALKSRVLAQVAELGADKLCDRVLFVGQIRHFGVYFSPVNFYFCYQDKTPLYMLAEVSNTPWDQR HCYLVDVAAPKPSDKVFHVSPFMTLDMRYLWHVAAPSEDLNIGIENKSMQENGKKLFNANLMMKRQPITAANLRTLLFRF PFMTLKIFFGIYWQALKLFFKRVPFVPHPAQMEK >Mature_273_residues TDPNVTSLNMTELNSGIYYGTVSHSRFTPIKHSFSYAMALLAIDLDEVDKISAMGRVFASQRRALLRFNPRDYLTSFTTK SNNSGEVAVADPSAAALKSRVLAQVAELGADKLCDRVLFVGQIRHFGVYFSPVNFYFCYQDKTPLYMLAEVSNTPWDQRH CYLVDVAAPKPSDKVFHVSPFMTLDMRYLWHVAAPSEDLNIGIENKSMQENGKKLFNANLMMKRQPITAANLRTLLFRFP FMTLKIFFGIYWQALKLFFKRVPFVPHPAQMEK
Specific function: Unknown
COG id: COG3496
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31294; Mature: 31162
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPNVTSLNMTELNSGIYYGTVSHSRFTPIKHSFSYAMALLAIDLDEVDKISAMGRVFA CCCCCCEEEEHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH SQRRALLRFNPRDYLTSFTTKSNNSGEVAVADPSAAALKSRVLAQVAELGADKLCDRVLF HHCHHEEEECCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHH VGQIRHFGVYFSPVNFYFCYQDKTPLYMLAEVSNTPWDQRHCYLVDVAAPKPSDKVFHVS HHHHHHCEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEC PFMTLDMRYLWHVAAPSEDLNIGIENKSMQENGKKLFNANLMMKRQPITAANLRTLLFRF CCCEECEEEEEEECCCCCCCEEEECCCCHHHCCHHEECCCEEEEECCCCHHHHHHHHHHH PFMTLKIFFGIYWQALKLFFKRVPFVPHPAQMEK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TDPNVTSLNMTELNSGIYYGTVSHSRFTPIKHSFSYAMALLAIDLDEVDKISAMGRVFA CCCCCEEEEHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH SQRRALLRFNPRDYLTSFTTKSNNSGEVAVADPSAAALKSRVLAQVAELGADKLCDRVLF HHCHHEEEECCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHH VGQIRHFGVYFSPVNFYFCYQDKTPLYMLAEVSNTPWDQRHCYLVDVAAPKPSDKVFHVS HHHHHHCEEEECCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEC PFMTLDMRYLWHVAAPSEDLNIGIENKSMQENGKKLFNANLMMKRQPITAANLRTLLFRF CCCEECEEEEEEECCCCCCCEEEECCCCHHHCCHHEECCCEEEEECCCCHHHHHHHHHHH PFMTLKIFFGIYWQALKLFFKRVPFVPHPAQMEK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA