| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yafP [C]
Identifier: 126175202
GI number: 126175202
Start: 3527899
End: 3528420
Strand: Reverse
Name: yafP [C]
Synonym: Sbal_3000
Alternate gene names: 126175202
Gene position: 3528420-3527899 (Counterclockwise)
Preceding gene: 126175203
Following gene: 126175201
Centisome position: 68.82
GC content: 45.59
Gene sequence:
>522_bases GTGACGGCGTTTGAACAGTTCGAGATCCAGCCTTATCAGTCATGTTATGCCCGAGAGGTTAGTGAGTTATTTCATCTTTG CGTGCATAACATCACCCATGCTCGTTATTCACAGGCGCAACTTGCAGCTTGGTCTGCGGCGCCAAGATCGGCTAAACATT GGGATTTGCGCTTAAACCGCTCGAAGGCGTGGGTGGTATTAGTCCAAGATGCAGCGACAGCTTCTTTAATTTGCTGCGGT TTTATCAATGTCGAAACTCATTTTACGCACCAAGGTTACGTAGACAGCTTATATATCCATCCAGATTATCAAGCTAAGGG ATTGGGTGAGCGTGCTTATCTTGTTTTAGAGGCGTGGGCTAAGGCGCAAGGCTATGCGCGCTTGAGTGTGGACGCCTCTT ATCTCTCTAAAGGGTTATTTACCCGTATGGGATTCATTCAAATACAGCGCAGTTATCAGCAAAAACTTGGGCAAGTGATC CCAGGCTTCTATATGGAGAAGAATATGGAAAAGAATATTTAA
Upstream 100 bases:
>100_bases TTAGCCTTTAATGCCGCAAAATCTGAGTCTATCTCGATTAAGCGAAACGCGGCAAAATAGCACTATTGCTAGCGGTTATT ACTCAACAGAGAACACTTAA
Downstream 100 bases:
>100_bases CGTTAGCTTACTAGGGTTTCAACCAAAAAGTGATGTAAGGTATTCCACAGTAAAACATTAGCTTAACGCCGTTGAGTGAC ACGATTTAAGTTAAATCAGC
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase YafP; Acetyltransferase Gnat Family
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTAFEQFEIQPYQSCYAREVSELFHLCVHNITHARYSQAQLAAWSAAPRSAKHWDLRLNRSKAWVVLVQDAATASLICCG FINVETHFTHQGYVDSLYIHPDYQAKGLGERAYLVLEAWAKAQGYARLSVDASYLSKGLFTRMGFIQIQRSYQQKLGQVI PGFYMEKNMEKNI
Sequences:
>Translated_173_residues MTAFEQFEIQPYQSCYAREVSELFHLCVHNITHARYSQAQLAAWSAAPRSAKHWDLRLNRSKAWVVLVQDAATASLICCG FINVETHFTHQGYVDSLYIHPDYQAKGLGERAYLVLEAWAKAQGYARLSVDASYLSKGLFTRMGFIQIQRSYQQKLGQVI PGFYMEKNMEKNI >Mature_172_residues TAFEQFEIQPYQSCYAREVSELFHLCVHNITHARYSQAQLAAWSAAPRSAKHWDLRLNRSKAWVVLVQDAATASLICCGF INVETHFTHQGYVDSLYIHPDYQAKGLGERAYLVLEAWAKAQGYARLSVDASYLSKGLFTRMGFIQIQRSYQQKLGQVIP GFYMEKNMEKNI
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 19848; Mature: 19717
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFEQFEIQPYQSCYAREVSELFHLCVHNITHARYSQAQLAAWSAAPRSAKHWDLRLNR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC SKAWVVLVQDAATASLICCGFINVETHFTHQGYVDSLYIHPDYQAKGLGERAYLVLEAWA CCEEEEEEECCCCCEEEEEEEEECEEEECCCCCEEEEEECCCCCCCCCCCHHHHEEEEHH KAQGYARLSVDASYLSKGLFTRMGFIQIQRSYQQKLGQVIPGFYMEKNMEKNI CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC >Mature Secondary Structure TAFEQFEIQPYQSCYAREVSELFHLCVHNITHARYSQAQLAAWSAAPRSAKHWDLRLNR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC SKAWVVLVQDAATASLICCGFINVETHFTHQGYVDSLYIHPDYQAKGLGERAYLVLEAWA CCEEEEEEECCCCCEEEEEEEEECEEEECCCCCEEEEEECCCCCCCCCCCHHHHEEEEHH KAQGYARLSVDASYLSKGLFTRMGFIQIQRSYQQKLGQVIPGFYMEKNMEKNI CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA