| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175161
Identifier: 126175161
GI number: 126175161
Start: 3471137
End: 3472354
Strand: Reverse
Name: 126175161
Synonym: Sbal_2959
Alternate gene names: NA
Gene position: 3472354-3471137 (Counterclockwise)
Preceding gene: 126175162
Following gene: 126175156
Centisome position: 67.72
GC content: 40.31
Gene sequence:
>1218_bases TTGACAATTGAAGTAAAAAATCTCCTACTTTTAGGTGCGAGTGCCGATCAAGTTTTTGCCATCAAGACCGCAAAGGCGAT GGGTTTGCATGTCATTGTTGTAGATGGGAATCCCAATTCACCAGGATTTGCGCTTGCCGATCAGTATGCGATTGTCAGTA CAAGAGATTTACCAGAGCTTAAAGCTTTTGTTGATCGATTACAAATAACAGTTCATGGTGTGGCGGTAATGGGTAGTGAT ATTTCTCAGTATGTATCTGCTCTTGCCGAGTATCTTTCGGTTCCTTGTATTCCTTTGGAAACAGCCCTGATCACAACAGA TAAACTTCTTATGAAACAATGCTTTGCCGAGAATGGCGTTGCTATCCCTTGGTTTTCTGCCGTTGAGAGCTTTGAGCATT TATGTATTCTGGTTGCCGAACGTGGCCTACCTTTAGTGCTAAAACCAGTGGATCGGTCAGGTGCCCGTGGGGTGTTTCTT TTGAAGGAGGGCATGGATATAGAAGCTTTATATCGGCGTTCAATAGAAGAATCGTTCAGTGGACAGGTTATTATCGAAGA GTATCTACAAGGGCCGCAGGTTAGTACCGAAACGCTTTTTCATCAAGGAAAAGGATATACTGCGGGATTTGTTGATCGTA ATTATGAGATGTTGGATGTTTTTGCTCCCTATATTCTCGAAAATGGCGGTTGGCAACCAAGTCGCTTATCCAAGTTACAG CGAAGTGAAATCGAGAAGCTTATTGATGATGTCGCTAAGGCATTAGATATTGAAAACGGAGTAATCAAAGGTGACATTGT TTATACTGAGACTGGAGCAAAGGTTATCGAGGTTGCAACTCGATTGAGCGGTGGTGATTTTTCTGAAAGTCTTGTTCCTT TAGGACTGGGAATTAACTATGTGCGCACTGCGTTAGAAATTGCACTGAATATTAAGCCTGACTTTGAGGCCTTAATCCCT AAACAAAATAAATTTGTTGCTAATCGATATTTTTTCCCTGAAAAAGGTCAACTCATTGGTATTCATGGAATTGAACAAGT TAAAACTCAGAGTTTTGTCAAAAAGCTAGATTTTTTTATTAATGTAGGTGAAAAAATTAAACCTATTTGTAGTCATGCGG ATAGGGCTGGTGTTTTTATCGTCATAGCGGATTCTTTAGAAGAGCTAGAGAAGCGAGTATCTTGGGTTTACGAGACTATT GTGTTTGAAATTAGCTAA
Upstream 100 bases:
>100_bases GGAAGAATTGAAGATATTTCAAGTGCCTGCGTATTTTTAGCATCGGATGAACAACAATATATGACTGGGCAAATTCTTGC GGTTAGTGGAGGAGCAATTC
Downstream 100 bases:
>100_bases ACCTATAACTAAACACCTTGTATAGTACTCGGTGTTTAGTTATGAATTATTGGCTAAAAATGCGGTCTGATGTGTTTGAG TGGACGTAATCCATCAAGGG
Product: phosphoribosylglycinamide synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MTIEVKNLLLLGASADQVFAIKTAKAMGLHVIVVDGNPNSPGFALADQYAIVSTRDLPELKAFVDRLQITVHGVAVMGSD ISQYVSALAEYLSVPCIPLETALITTDKLLMKQCFAENGVAIPWFSAVESFEHLCILVAERGLPLVLKPVDRSGARGVFL LKEGMDIEALYRRSIEESFSGQVIIEEYLQGPQVSTETLFHQGKGYTAGFVDRNYEMLDVFAPYILENGGWQPSRLSKLQ RSEIEKLIDDVAKALDIENGVIKGDIVYTETGAKVIEVATRLSGGDFSESLVPLGLGINYVRTALEIALNIKPDFEALIP KQNKFVANRYFFPEKGQLIGIHGIEQVKTQSFVKKLDFFINVGEKIKPICSHADRAGVFIVIADSLEELEKRVSWVYETI VFEIS
Sequences:
>Translated_405_residues MTIEVKNLLLLGASADQVFAIKTAKAMGLHVIVVDGNPNSPGFALADQYAIVSTRDLPELKAFVDRLQITVHGVAVMGSD ISQYVSALAEYLSVPCIPLETALITTDKLLMKQCFAENGVAIPWFSAVESFEHLCILVAERGLPLVLKPVDRSGARGVFL LKEGMDIEALYRRSIEESFSGQVIIEEYLQGPQVSTETLFHQGKGYTAGFVDRNYEMLDVFAPYILENGGWQPSRLSKLQ RSEIEKLIDDVAKALDIENGVIKGDIVYTETGAKVIEVATRLSGGDFSESLVPLGLGINYVRTALEIALNIKPDFEALIP KQNKFVANRYFFPEKGQLIGIHGIEQVKTQSFVKKLDFFINVGEKIKPICSHADRAGVFIVIADSLEELEKRVSWVYETI VFEIS >Mature_404_residues TIEVKNLLLLGASADQVFAIKTAKAMGLHVIVVDGNPNSPGFALADQYAIVSTRDLPELKAFVDRLQITVHGVAVMGSDI SQYVSALAEYLSVPCIPLETALITTDKLLMKQCFAENGVAIPWFSAVESFEHLCILVAERGLPLVLKPVDRSGARGVFLL KEGMDIEALYRRSIEESFSGQVIIEEYLQGPQVSTETLFHQGKGYTAGFVDRNYEMLDVFAPYILENGGWQPSRLSKLQR SEIEKLIDDVAKALDIENGVIKGDIVYTETGAKVIEVATRLSGGDFSESLVPLGLGINYVRTALEIALNIKPDFEALIPK QNKFVANRYFFPEKGQLIGIHGIEQVKTQSFVKKLDFFINVGEKIKPICSHADRAGVFIVIADSLEELEKRVSWVYETIV FEIS
Specific function: Unknown
COG id: COG0439
COG function: function code I; Biotin carboxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR005479 [H]
Pfam domain/function: PF02786 CPSase_L_D2 [H]
EC number: NA
Molecular weight: Translated: 44736; Mature: 44605
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEVKNLLLLGASADQVFAIKTAKAMGLHVIVVDGNPNSPGFALADQYAIVSTRDLPEL CEEEEEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEECCEEEEECCCCHHH KAFVDRLQITVHGVAVMGSDISQYVSALAEYLSVPCIPLETALITTDKLLMKQCFAENGV HHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC AIPWFSAVESFEHLCILVAERGLPLVLKPVDRSGARGVFLLKEGMDIEALYRRSIEESFS CCCHHHHHHHHHHEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCC GQVIIEEYLQGPQVSTETLFHQGKGYTAGFVDRNYEMLDVFAPYILENGGWQPSRLSKLQ CCEEEHHHHCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHH RSEIEKLIDDVAKALDIENGVIKGDIVYTETGAKVIEVATRLSGGDFSESLVPLGLGINY HHHHHHHHHHHHHHHCCCCCEEECEEEEECCCCHHHHHHHHCCCCCCCCCCEECCCCHHH VRTALEIALNIKPDFEALIPKQNKFVANRYFFPEKGQLIGIHGIEQVKTQSFVKKLDFFI HHHHHHHEEECCCCHHHHCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHH NVGEKIKPICSHADRAGVFIVIADSLEELEKRVSWVYETIVFEIS CCCHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEC >Mature Secondary Structure TIEVKNLLLLGASADQVFAIKTAKAMGLHVIVVDGNPNSPGFALADQYAIVSTRDLPEL EEEEEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEECCEEEEECCCCHHH KAFVDRLQITVHGVAVMGSDISQYVSALAEYLSVPCIPLETALITTDKLLMKQCFAENGV HHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC AIPWFSAVESFEHLCILVAERGLPLVLKPVDRSGARGVFLLKEGMDIEALYRRSIEESFS CCCHHHHHHHHHHEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCC GQVIIEEYLQGPQVSTETLFHQGKGYTAGFVDRNYEMLDVFAPYILENGGWQPSRLSKLQ CCEEEHHHHCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHH RSEIEKLIDDVAKALDIENGVIKGDIVYTETGAKVIEVATRLSGGDFSESLVPLGLGINY HHHHHHHHHHHHHHHCCCCCEEECEEEEECCCCHHHHHHHHCCCCCCCCCCEECCCCHHH VRTALEIALNIKPDFEALIPKQNKFVANRYFFPEKGQLIGIHGIEQVKTQSFVKKLDFFI HHHHHHHEEECCCCHHHHCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHH NVGEKIKPICSHADRAGVFIVIADSLEELEKRVSWVYETIVFEIS CCCHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]