| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is cheV [H]
Identifier: 126175151
GI number: 126175151
Start: 3463070
End: 3463990
Strand: Reverse
Name: cheV [H]
Synonym: Sbal_2949
Alternate gene names: 126175151
Gene position: 3463990-3463070 (Counterclockwise)
Preceding gene: 126175155
Following gene: 126175150
Centisome position: 67.56
GC content: 42.24
Gene sequence:
>921_bases ATGTCGAGTATTCTTGATTCAGTCAACAAACGAACCCAGCTCGTTGGTCAAAACCGTTTAGAATTGCTGCTTTTTAAATT AAACGGTCGTCAACGGTTTGGGATTAACGTGTTTAAGGTGAAAGAAGTACTGCAGTGCCCGCCACTGACAACTTTGCCTA AACTTAATCCTTATGTTAAAGGTGTCGCGCATATTCGCGGTACGACTATTTCAGTTATTGATCTGAGTGCGGCAACAGGT GGTAGACCTTTAGCGAGTACTGAAAACTGTTTCATCATTATTTCTGAATATAACCGCAGTGTTCAAGGTTTCTTGGTCAG TTCTGTTGAGCGGATTATCAACATGAATTGGGAAGCGATTATGCCTCCGCCGCAAGGTGCCGGTCGTTATTCTTATCTGA CGGCTGTAACTGAGATAGAAGGTGAATTGGTTGAAATTCTCGACGTAGAAAAAATCTTAGATGAGATTTCACCGGTTAAA ACTGCCATCAGTGAAGAAGCCAATGAAAAGCTGACCCTCGACAGAACCCAGCATTACCATATTATGGTTATCGATGATTC TGCCGTGGCGCGTAAGCAAATTATTCGTTCACTCGAGTCATTGAACTTACAAATTGATACCGCAAAAGATGGTCGAGAAG CATTAGATAAGCTTAAAGAAATCGCCAAAGAAATGGACAATGTTGCCGATGAAATCCCTCTCATTATCTCAGACATTGAG ATGCCTGAAATGGATGGCTATACCTTGACCGCTGAGATCCGAGACGATCCTAAGCTCAAGCATATTAAAGTGGTACTGCA TACGTCGTTAAGTGGTGTATTCAATCAGGCAATGGTTCAAAAAGTGGGGGCCAATGACTTTATCGCTAAGTTTAATCCCG ACGAACTGGCTGCTGCCGTGAATAAACACTTAAGTTTGTAA
Upstream 100 bases:
>100_bases TTTCGACTATGTTTATCGATAGATAAGACGTAAGCAATTAATATGCCTATACTCAAACGAGTCATAGGGCCGTACATAAA CAGAACAACAAGGCAGAGTT
Downstream 100 bases:
>100_bases GTGCAGTAGTTAGTACCTAGATACGCTTTACGCTATAATCTCGACTTTATAACATGATGGTTTCGCACTGATTTTGGTGC TTGCTATAGGATTTAGGATG
Product: putative CheW protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSSILDSVNKRTQLVGQNRLELLLFKLNGRQRFGINVFKVKEVLQCPPLTTLPKLNPYVKGVAHIRGTTISVIDLSAATG GRPLASTENCFIIISEYNRSVQGFLVSSVERIINMNWEAIMPPPQGAGRYSYLTAVTEIEGELVEILDVEKILDEISPVK TAISEEANEKLTLDRTQHYHIMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKEIAKEMDNVADEIPLIISDIE MPEMDGYTLTAEIRDDPKLKHIKVVLHTSLSGVFNQAMVQKVGANDFIAKFNPDELAAAVNKHLSL
Sequences:
>Translated_306_residues MSSILDSVNKRTQLVGQNRLELLLFKLNGRQRFGINVFKVKEVLQCPPLTTLPKLNPYVKGVAHIRGTTISVIDLSAATG GRPLASTENCFIIISEYNRSVQGFLVSSVERIINMNWEAIMPPPQGAGRYSYLTAVTEIEGELVEILDVEKILDEISPVK TAISEEANEKLTLDRTQHYHIMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKEIAKEMDNVADEIPLIISDIE MPEMDGYTLTAEIRDDPKLKHIKVVLHTSLSGVFNQAMVQKVGANDFIAKFNPDELAAAVNKHLSL >Mature_305_residues SSILDSVNKRTQLVGQNRLELLLFKLNGRQRFGINVFKVKEVLQCPPLTTLPKLNPYVKGVAHIRGTTISVIDLSAATGG RPLASTENCFIIISEYNRSVQGFLVSSVERIINMNWEAIMPPPQGAGRYSYLTAVTEIEGELVEILDVEKILDEISPVKT AISEEANEKLTLDRTQHYHIMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKEIAKEMDNVADEIPLIISDIEM PEMDGYTLTAEIRDDPKLKHIKVVLHTSLSGVFNQAMVQKVGANDFIAKFNPDELAAAVNKHLSL
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=151, Percent_Identity=27.1523178807947, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 34032; Mature: 33901
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSILDSVNKRTQLVGQNRLELLLFKLNGRQRFGINVFKVKEVLQCPPLTTLPKLNPYVK CCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEECCCHHHHHHHHHCCCCCCCCCCCHHHH GVAHIRGTTISVIDLSAATGGRPLASTENCFIIISEYNRSVQGFLVSSVERIINMNWEAI HHHHHCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE MPPPQGAGRYSYLTAVTEIEGELVEILDVEKILDEISPVKTAISEEANEKLTLDRTQHYH CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEE IMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKEIAKEMDNVADEIPLIISDIE EEEECCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCC MPEMDGYTLTAEIRDDPKLKHIKVVLHTSLSGVFNQAMVQKVGANDFIAKFNPDELAAAV CCCCCCEEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHH NKHLSL HHHCCC >Mature Secondary Structure SSILDSVNKRTQLVGQNRLELLLFKLNGRQRFGINVFKVKEVLQCPPLTTLPKLNPYVK CHHHHHHHHHHHHHCCCCEEEEEEEECCCEEECCCHHHHHHHHHCCCCCCCCCCCHHHH GVAHIRGTTISVIDLSAATGGRPLASTENCFIIISEYNRSVQGFLVSSVERIINMNWEAI HHHHHCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE MPPPQGAGRYSYLTAVTEIEGELVEILDVEKILDEISPVKTAISEEANEKLTLDRTQHYH CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEE IMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKEIAKEMDNVADEIPLIISDIE EEEECCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCC MPEMDGYTLTAEIRDDPKLKHIKVVLHTSLSGVFNQAMVQKVGANDFIAKFNPDELAAAV CCCCCCEEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHH NKHLSL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]