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The map label for this gene is flgD [H]

Identifier: 126175147

GI number: 126175147

Start: 3460369

End: 3461139

Strand: Reverse

Name: flgD [H]

Synonym: Sbal_2945

Alternate gene names: 126175147

Gene position: 3461139-3460369 (Counterclockwise)

Preceding gene: 126175148

Following gene: 126175146

Centisome position: 67.5

GC content: 45.53

Gene sequence:

>771_bases
GTGAGCCTCATTAATCAAATTAACCAAGCATCGGCGCAGACGGCTCAAAATAAGAGTCAGTCAAATGCTGTTACGACCAA
TTCATCAACCAGCTCAACGGGCAATCCGTTTCTTGATGGCATACGTTTGCCAAAAGATTCGATAGTACCGGAAGCGAAAA
GCCAACAGTTAACTCAAGATGATTTTTTCTCGTTATTAAGCCAACAGTTATCGATGCAGGACCCTTTTAAGCCTGTTGAC
AATGATCAAATGATTGCGCAGATGGCATCATTTTCGACGGTTGATGGTATCGGCAAGTTAAATGATGAAATTGTTAACTT
AAACAGTGTCATGACGTCGAGCCAAGCACTGCAGGCATCGGGACTTGTTGGTCGTAAGGTTTTGATCCCAACCGATACTG
GTAATATTTCAGCTGAAAGCCCAACGATAAAAGGGGTGATCAGCACGCCGAGTAAAATCCCTGAGCTCTCAGTACGCGTA
GAGGATGAAAAGGGTCAAGTCGTAGCCACCTTTAAAGTCGATGGAAGTGACGGTGGTAACGTCGATGTGAACTGGAATGG
TTTAGATAAGAATGGCCAGCCAGTGGTCGCAGGTAACTATACGATTAAGGCGAGTGGTTTAGTGGATGGGAAATCCCAAG
AGCTGCCCGTTTCAACCTATGCTCATGTGAGCAGCGTTTCTTTAGGGACGGCCAGTACCGGCGCCATTCTTAACTTGAGA
GGCGGTATGGGTATCAAGTTAACCGACGTGTTAGCTGTTTCTGAAACTTAA

Upstream 100 bases:

>100_bases
CTCATATCAAATGAATGTTCAGGTCGCTGAAGCAGCTAAGTCTATGCTGCAACAAACACTTGGGATGGGTAAATAACATG
TGTTACTTAGGAGGTAAGCT

Downstream 100 bases:

>100_bases
GTTTATTGAAAGAATTTTTACAGAATCCGAATTGGGCGTTTGTCGTCCGCAATTGAATTGAGTCAAATGTAGAGGTGAAT
TATGTCGTTTAACATTGCAT

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSLINQINQASAQTAQNKSQSNAVTTNSSTSSTGNPFLDGIRLPKDSIVPEAKSQQLTQDDFFSLLSQQLSMQDPFKPVD
NDQMIAQMASFSTVDGIGKLNDEIVNLNSVMTSSQALQASGLVGRKVLIPTDTGNISAESPTIKGVISTPSKIPELSVRV
EDEKGQVVATFKVDGSDGGNVDVNWNGLDKNGQPVVAGNYTIKASGLVDGKSQELPVSTYAHVSSVSLGTASTGAILNLR
GGMGIKLTDVLAVSET

Sequences:

>Translated_256_residues
MSLINQINQASAQTAQNKSQSNAVTTNSSTSSTGNPFLDGIRLPKDSIVPEAKSQQLTQDDFFSLLSQQLSMQDPFKPVD
NDQMIAQMASFSTVDGIGKLNDEIVNLNSVMTSSQALQASGLVGRKVLIPTDTGNISAESPTIKGVISTPSKIPELSVRV
EDEKGQVVATFKVDGSDGGNVDVNWNGLDKNGQPVVAGNYTIKASGLVDGKSQELPVSTYAHVSSVSLGTASTGAILNLR
GGMGIKLTDVLAVSET
>Mature_255_residues
SLINQINQASAQTAQNKSQSNAVTTNSSTSSTGNPFLDGIRLPKDSIVPEAKSQQLTQDDFFSLLSQQLSMQDPFKPVDN
DQMIAQMASFSTVDGIGKLNDEIVNLNSVMTSSQALQASGLVGRKVLIPTDTGNISAESPTIKGVISTPSKIPELSVRVE
DEKGQVVATFKVDGSDGGNVDVNWNGLDKNGQPVVAGNYTIKASGLVDGKSQELPVSTYAHVSSVSLGTASTGAILNLRG
GMGIKLTDVLAVSET

Specific function: Required for flagellar hook formation. May act as a scaffolding protein [H]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

Organism=Escherichia coli, GI1787315, Length=155, Percent_Identity=30.9677419354839, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 26772; Mature: 26641

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLINQINQASAQTAQNKSQSNAVTTNSSTSSTGNPFLDGIRLPKDSIVPEAKSQQLTQD
CCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEECCHHHCCCCCHHHCCCHH
DFFSLLSQQLSMQDPFKPVDNDQMIAQMASFSTVDGIGKLNDEIVNLNSVMTSSQALQAS
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHEEEHHHHHHHHHHHHHC
GLVGRKVLIPTDTGNISAESPTIKGVISTPSKIPELSVRVEDEKGQVVATFKVDGSDGGN
CCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCCCE
VDVNWNGLDKNGQPVVAGNYTIKASGLVDGKSQELPVSTYAHVSSVSLGTASTGAILNLR
EEEEECCCCCCCCEEEECCEEEEECCEECCCCCCCCCHHHHHEEEEECCCCCCCEEEEEC
GGMGIKLTDVLAVSET
CCCCEEEEEEEEECCC
>Mature Secondary Structure 
SLINQINQASAQTAQNKSQSNAVTTNSSTSSTGNPFLDGIRLPKDSIVPEAKSQQLTQD
CHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEECCHHHCCCCCHHHCCCHH
DFFSLLSQQLSMQDPFKPVDNDQMIAQMASFSTVDGIGKLNDEIVNLNSVMTSSQALQAS
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHEEEHHHHHHHHHHHHHC
GLVGRKVLIPTDTGNISAESPTIKGVISTPSKIPELSVRVEDEKGQVVATFKVDGSDGGN
CCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCCCE
VDVNWNGLDKNGQPVVAGNYTIKASGLVDGKSQELPVSTYAHVSSVSLGTASTGAILNLR
EEEEECCCCCCCCEEEECCEEEEECCEECCCCCCCCCHHHHHEEEEECCCCCCCEEEEEC
GGMGIKLTDVLAVSET
CCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]