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The map label for this gene is fliC [H]

Identifier: 126175138

GI number: 126175138

Start: 3450130

End: 3450957

Strand: Reverse

Name: fliC [H]

Synonym: Sbal_2936

Alternate gene names: 126175138

Gene position: 3450957-3450130 (Counterclockwise)

Preceding gene: 126175139

Following gene: 126175137

Centisome position: 67.3

GC content: 42.15

Gene sequence:

>828_bases
ATGGCTATTACAGTTAATACCAACGTGACTTCAATGAAGGCACAAAAGAATTTAAATACTTCTAGTAGCGGTTTAGCTAG
CTCTATGGAACGTCTATCAAGTGGTCTGCGCATTAACAGCGCCAAAGACGACGCGGCGGGTCTAGCCATTTCTAACCGCT
TGAACAGTCAAGTGCGCGGTTTGGATGTGGGTATGCGTAACGCTAATGATGCAATTTCAATTGCTCAAATCTCCGAAGGT
GCGATGCAAGAACAAACTAACATGTTGCAACGCATGCGCGACTTGACTATTCAAGCTGAGAACGGTGCGAACTCAACCTC
GGATATTGATGCTATCAAATCAGAAATTGATGCGTTAGCATCTGAAATATCTGCTATTGCAAATTCCACTGCGTTCGGTA
ACACCAAGTTACTCGATGGCACATTTTCTGCTGGAAAAACTTTCCAAGTAGGGCATCAAAATAAAGAAGACATAACAGTT
TCGGTATCTAAAGTCACTGCAAGCGCTTTGAAAGTACAGGCTTCAGTTGTGAAGGTTTCTACTGCTGCTCAGAGAAGTGC
ATCATTAACAAATATTGATGCAGCAATCAAAGCGATTGATACGCAACGATCAAATTTAGGTGCTATTCAGAATAGACTTG
CGTACAACATTAGTAATAGTGCGAATACTCAAGCTAACGTTGCTGATGCAAAGAGCCGTATTGTTGACGTTGATTTCGCA
AAAGAAACTGCCACTATGACGAAGAACCAAGTACTACAACAAACGGGTTCAGCTATGCTTGCGCAGGCTAACCAGTTACC
TCAAGTTGCATTATCTCTATTAGGTTAG

Upstream 100 bases:

>100_bases
ATTTAACAGAAAGCAAGTACCTATCCATCTGTAAGATAAATTGTTAAAAATTTAGCCAAGCTCCAAGCCTTGGCGGTATA
ACTAGGAAGAGGAACTCAAC

Downstream 100 bases:

>100_bases
TTTTTATAGAAGTGAAATGCTTGTGAAGCACTTTTGCCTACTTGTTCTAGAGTCACCTAGGAAAGTAGGCAAAGTTTTAT
TAAATTTCAATCCTTATCTA

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MAITVNTNVTSMKAQKNLNTSSSGLASSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDVGMRNANDAISIAQISEG
AMQEQTNMLQRMRDLTIQAENGANSTSDIDAIKSEIDALASEISAIANSTAFGNTKLLDGTFSAGKTFQVGHQNKEDITV
SVSKVTASALKVQASVVKVSTAAQRSASLTNIDAAIKAIDTQRSNLGAIQNRLAYNISNSANTQANVADAKSRIVDVDFA
KETATMTKNQVLQQTGSAMLAQANQLPQVALSLLG

Sequences:

>Translated_275_residues
MAITVNTNVTSMKAQKNLNTSSSGLASSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDVGMRNANDAISIAQISEG
AMQEQTNMLQRMRDLTIQAENGANSTSDIDAIKSEIDALASEISAIANSTAFGNTKLLDGTFSAGKTFQVGHQNKEDITV
SVSKVTASALKVQASVVKVSTAAQRSASLTNIDAAIKAIDTQRSNLGAIQNRLAYNISNSANTQANVADAKSRIVDVDFA
KETATMTKNQVLQQTGSAMLAQANQLPQVALSLLG
>Mature_274_residues
AITVNTNVTSMKAQKNLNTSSSGLASSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDVGMRNANDAISIAQISEGA
MQEQTNMLQRMRDLTIQAENGANSTSDIDAIKSEIDALASEISAIANSTAFGNTKLLDGTFSAGKTFQVGHQNKEDITVS
VSKVTASALKVQASVVKVSTAAQRSASLTNIDAAIKAIDTQRSNLGAIQNRLAYNISNSANTQANVADAKSRIVDVDFAK
ETATMTKNQVLQQTGSAMLAQANQLPQVALSLLG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=192, Percent_Identity=44.7916666666667, Blast_Score=145, Evalue=2e-36,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 28793; Mature: 28661

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITVNTNVTSMKAQKNLNTSSSGLASSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG
CEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHC
LDVGMRNANDAISIAQISEGAMQEQTNMLQRMRDLTIQAENGANSTSDIDAIKSEIDALA
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHH
SEISAIANSTAFGNTKLLDGTFSAGKTFQVGHQNKEDITVSVSKVTASALKVQASVVKVS
HHHHHHHCCCCCCCCEEECCCCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
TAAQRSASLTNIDAAIKAIDTQRSNLGAIQNRLAYNISNSANTQANVADAKSRIVDVDFA
HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHEEEEEHH
KETATMTKNQVLQQTGSAMLAQANQLPQVALSLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AITVNTNVTSMKAQKNLNTSSSGLASSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG
EEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHC
LDVGMRNANDAISIAQISEGAMQEQTNMLQRMRDLTIQAENGANSTSDIDAIKSEIDALA
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHH
SEISAIANSTAFGNTKLLDGTFSAGKTFQVGHQNKEDITVSVSKVTASALKVQASVVKVS
HHHHHHHCCCCCCCCEEECCCCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
TAAQRSASLTNIDAAIKAIDTQRSNLGAIQNRLAYNISNSANTQANVADAKSRIVDVDFA
HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHEEEEEHH
KETATMTKNQVLQQTGSAMLAQANQLPQVALSLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8996114 [H]