Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

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The map label for this gene is yfbR [C]

Identifier: 126174452

GI number: 126174452

Start: 2585709

End: 2586296

Strand: Direct

Name: yfbR [C]

Synonym: Sbal_2236

Alternate gene names: 126174452

Gene position: 2585709-2586296 (Clockwise)

Preceding gene: 126174451

Following gene: 126174453

Centisome position: 50.43

GC content: 45.75

Gene sequence:

>588_bases
ATGAGTCACTTATTTGCCCATTTAGCTCGAATGAAACTTATCCAACGCTGGCCTTTGATGTACAACGTTCGCACTGAAAA
TGTTCAGGAACACTCGCTACAAGTCGCCATGGTGGCCCATGCACTGGTGATCATCAGCAATAAAAAGTTCGGCACGACGC
TTGATCCCCATCAAGCCACGAGCCTGGCGATTTTTCACGATGCCAGTGAAATTCTCACGGGTGACTTACCAACGCCGGTG
AAATACTTCAATAAAGAAATCGAAGCCGAGTATAAAAAAATTGAGGCGATTGCCGAGCAGCGCATGCTGGATATGGTGCC
AGAAGAATTTAAAGAAGATTATCGCAGTCTGTTCATCAGTGATTACGCCGATCCCGTTTACAAGACCATAGTGAAATCCG
CTGATACTCTGTGTGCCTATCTTAAATGTCTTGAAGAAAACCGCGCGGGAAACAGTGAGTTCAACACCGCCCGTAAGCGT
CTCGAAGACATGCTGGCGACAAATCCTGACCCCGCAGTACAGTATTTTATGAACTGCTTTGTGCCCAGTTTCACCTTGAA
TTTAGACGAAATTAACAAGATGCTTTGA

Upstream 100 bases:

>100_bases
TAATCTAAGACTTCATTAGCGTCAATACTGCTTATTCAACTCGTGTCACGTCTTCCAATGCAGCTTGTCGCCTTTCTATT
CACTTATTAGCAGGAAAATC

Downstream 100 bases:

>100_bases
TTTTCCACTCTCGCTAGGAATGCATATGACTTCAAGTGTTTGGCAAGAACGCCGTCATGGTGAAGATAAACAACGGCGTA
ACGATCACCGCAGCCCTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSHLFAHLARMKLIQRWPLMYNVRTENVQEHSLQVAMVAHALVIISNKKFGTTLDPHQATSLAIFHDASEILTGDLPTPV
KYFNKEIEAEYKKIEAIAEQRMLDMVPEEFKEDYRSLFISDYADPVYKTIVKSADTLCAYLKCLEENRAGNSEFNTARKR
LEDMLATNPDPAVQYFMNCFVPSFTLNLDEINKML

Sequences:

>Translated_195_residues
MSHLFAHLARMKLIQRWPLMYNVRTENVQEHSLQVAMVAHALVIISNKKFGTTLDPHQATSLAIFHDASEILTGDLPTPV
KYFNKEIEAEYKKIEAIAEQRMLDMVPEEFKEDYRSLFISDYADPVYKTIVKSADTLCAYLKCLEENRAGNSEFNTARKR
LEDMLATNPDPAVQYFMNCFVPSFTLNLDEINKML
>Mature_194_residues
SHLFAHLARMKLIQRWPLMYNVRTENVQEHSLQVAMVAHALVIISNKKFGTTLDPHQATSLAIFHDASEILTGDLPTPVK
YFNKEIEAEYKKIEAIAEQRMLDMVPEEFKEDYRSLFISDYADPVYKTIVKSADTLCAYLKCLEENRAGNSEFNTARKRL
EDMLATNPDPAVQYFMNCFVPSFTLNLDEINKML

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0207 family [H]

Homologues:

Organism=Escherichia coli, GI1788628, Length=192, Percent_Identity=59.375, Blast_Score=235, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022971
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22472; Mature: 22341

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLFAHLARMKLIQRWPLMYNVRTENVQEHSLQVAMVAHALVIISNKKFGTTLDPHQAT
CHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
SLAIFHDASEILTGDLPTPVKYFNKEIEAEYKKIEAIAEQRMLDMVPEEFKEDYRSLFIS
HHHEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
DYADPVYKTIVKSADTLCAYLKCLEENRAGNSEFNTARKRLEDMLATNPDPAVQYFMNCF
HHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VPSFTLNLDEINKML
CCHHCCCHHHHHHCC
>Mature Secondary Structure 
SHLFAHLARMKLIQRWPLMYNVRTENVQEHSLQVAMVAHALVIISNKKFGTTLDPHQAT
HHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
SLAIFHDASEILTGDLPTPVKYFNKEIEAEYKKIEAIAEQRMLDMVPEEFKEDYRSLFIS
HHHEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
DYADPVYKTIVKSADTLCAYLKCLEENRAGNSEFNTARKRLEDMLATNPDPAVQYFMNCF
HHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VPSFTLNLDEINKML
CCHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]