| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174433
Identifier: 126174433
GI number: 126174433
Start: 2564553
End: 2565452
Strand: Direct
Name: 126174433
Synonym: Sbal_2217
Alternate gene names: NA
Gene position: 2564553-2565452 (Clockwise)
Preceding gene: 126174430
Following gene: 126174434
Centisome position: 50.02
GC content: 44.56
Gene sequence:
>900_bases TTGAGACAAAATCTAGTAATAATTACATCATTTACCTTAGGGATGAGCCTTTTTGGTCTTTTCGGTTGTGATAATGACCG AAATATCTCAGCAATTTGTAAAAATAATCCTGAAATTTGTGCCGATTTGCATAAAGATAGCTGGTGTTTGGCTGAAAAGA CCAAACTTATCCAAAACCGCTACAAGTTAAAAGACAACGAAAACCCCACAGGCAAACAGCTCTACCTGCAATTGACCTAT CTTGAGGATTACAGCCGCTGCATTGAACTCGCCTCTGGCGTGCAGCATATCATCCACACCAATCGCACCGCTGATAGAGC CAGAGCCTTTCGATTAAGTACCCAGAATTTAAGTTTGCTGCAAGAGCAAACCCGCGAGCGACAAGATCCTTTCATGTCCT ATTACCAATGGACGCGCTTTGGCGATACCGCAGCGTTAAATCGATTGTTAGAACATGAAAACGCCGGCGAAGTGACTGAC TCTTTCTTACTTGCCCAAGTCGCCACCTATTACAGCAATCGAAATGCCATCAAAGCGCAACAACTCTATCTTAAAGTCTT TGCAGACATCCAATACGATGATTTCGACGTTAACTGGTTACTTGGGCTCGCATCAGCCTATCGTCAGCAACAGGTATTCG ATAAAGCCTATATGCTGACGAAGGCAAATTTACTACTTACGCAGCAGAAGTATTCAGAGGAAAAAATGCTAGCCTTGCTC GGTGGCAATAAAACGCTGGCGACTGAACTCGATTTAAAAGCCCAAGCCCTTATCGATGCGCTAAAAAACGGGACTTATTC TCAGAGTCCAGTAAGACAATGGCTTGATCCTCAAGCGGTTGATCAAGCGCCAACGACAACCGAGGCTGTGCCGCCTGCGC CTGTCGAAAAAACAGACTAA
Upstream 100 bases:
>100_bases TTGGTCGGCGCCATTGTAATGAAAGTCGCGCTTTGTTGCCAGTAAGATATTTTCTGTAAATCTGTAATTTTATTAGAAAA ATTATCGTTTGGAGAGTGTT
Downstream 100 bases:
>100_bases GCAATCGATGGCAAAATGTTTGCCATCTTGTAATTTTTTACCCAATTAACGCGTAAAAAATGGTGATTTCGCGACCGATG TAAAAAAAATACCTAATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MRQNLVIITSFTLGMSLFGLFGCDNDRNISAICKNNPEICADLHKDSWCLAEKTKLIQNRYKLKDNENPTGKQLYLQLTY LEDYSRCIELASGVQHIIHTNRTADRARAFRLSTQNLSLLQEQTRERQDPFMSYYQWTRFGDTAALNRLLEHENAGEVTD SFLLAQVATYYSNRNAIKAQQLYLKVFADIQYDDFDVNWLLGLASAYRQQQVFDKAYMLTKANLLLTQQKYSEEKMLALL GGNKTLATELDLKAQALIDALKNGTYSQSPVRQWLDPQAVDQAPTTTEAVPPAPVEKTD
Sequences:
>Translated_299_residues MRQNLVIITSFTLGMSLFGLFGCDNDRNISAICKNNPEICADLHKDSWCLAEKTKLIQNRYKLKDNENPTGKQLYLQLTY LEDYSRCIELASGVQHIIHTNRTADRARAFRLSTQNLSLLQEQTRERQDPFMSYYQWTRFGDTAALNRLLEHENAGEVTD SFLLAQVATYYSNRNAIKAQQLYLKVFADIQYDDFDVNWLLGLASAYRQQQVFDKAYMLTKANLLLTQQKYSEEKMLALL GGNKTLATELDLKAQALIDALKNGTYSQSPVRQWLDPQAVDQAPTTTEAVPPAPVEKTD >Mature_299_residues MRQNLVIITSFTLGMSLFGLFGCDNDRNISAICKNNPEICADLHKDSWCLAEKTKLIQNRYKLKDNENPTGKQLYLQLTY LEDYSRCIELASGVQHIIHTNRTADRARAFRLSTQNLSLLQEQTRERQDPFMSYYQWTRFGDTAALNRLLEHENAGEVTD SFLLAQVATYYSNRNAIKAQQLYLKVFADIQYDDFDVNWLLGLASAYRQQQVFDKAYMLTKANLLLTQQKYSEEKMLALL GGNKTLATELDLKAQALIDALKNGTYSQSPVRQWLDPQAVDQAPTTTEAVPPAPVEKTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34126; Mature: 34126
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQNLVIITSFTLGMSLFGLFGCDNDRNISAICKNNPEICADLHKDSWCLAEKTKLIQNR CCCCEEEEEEHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHH YKLKDNENPTGKQLYLQLTYLEDYSRCIELASGVQHIIHTNRTADRARAFRLSTQNLSLL HHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH QEQTRERQDPFMSYYQWTRFGDTAALNRLLEHENAGEVTDSFLLAQVATYYSNRNAIKAQ HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHH QLYLKVFADIQYDDFDVNWLLGLASAYRQQQVFDKAYMLTKANLLLTQQKYSEEKMLALL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCHHHEEEEE GGNKTLATELDLKAQALIDALKNGTYSQSPVRQWLDPQAVDQAPTTTEAVPPAPVEKTD CCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRQNLVIITSFTLGMSLFGLFGCDNDRNISAICKNNPEICADLHKDSWCLAEKTKLIQNR CCCCEEEEEEHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHH YKLKDNENPTGKQLYLQLTYLEDYSRCIELASGVQHIIHTNRTADRARAFRLSTQNLSLL HHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH QEQTRERQDPFMSYYQWTRFGDTAALNRLLEHENAGEVTDSFLLAQVATYYSNRNAIKAQ HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHH QLYLKVFADIQYDDFDVNWLLGLASAYRQQQVFDKAYMLTKANLLLTQQKYSEEKMLALL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCHHHEEEEE GGNKTLATELDLKAQALIDALKNGTYSQSPVRQWLDPQAVDQAPTTTEAVPPAPVEKTD CCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA