| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is fhuE [H]
Identifier: 126174353
GI number: 126174353
Start: 2480163
End: 2482331
Strand: Direct
Name: fhuE [H]
Synonym: Sbal_2136
Alternate gene names: 126174353
Gene position: 2480163-2482331 (Clockwise)
Preceding gene: 126174352
Following gene: 126174354
Centisome position: 48.37
GC content: 44.21
Gene sequence:
>2169_bases ATGCAATTTAATTTACTTCCTCTTGCGGCGGCTGTTGCTTTGGCCTTAAACCCTTTACTGGTTTTAGCCGAGGAGCAGTC AACTCCTGATCTCCAAGACCAGAATATTGAAAAAATCACTGTGATGGGCAAATACACTGTCAGCAAGACTATCGATACCG CCACTGGGCTTGGATTGTCGTTGATGGAAACGCCGCAGTCAGTGTCGATTTTAACGGCTGAGCGAATTCAAGATCAGGCG CTTAATACTGTCGTTGATGTCGTTAATAATGCAGTCGGTTTATCGTCATCTAAAACTGACAACGTGCGTAATGGTTTTAA TTCTCGCGGATTTTCAGTGCAAAATTACCAGATTGACGGTGTACCTTTATCTTGGAGTTTAGGTGGTGATGCCGGCGAAA CCGTTTCTGATGTATCCCTTTATGAACGAGTTGAAGTGGTGCGAGGGGCAACAGGCTTACTCACAGGTGCCGGTGATCCG TCAGCTTCGATTAATTTGGTACGCAAACATGCCGATAGCAGCGACCTGAAGGGTTATATCAATGTAACAACGGGCAGTTG GGATAAAAAGCAGATCACTGCAGATGTCTCTAATGGCCTCAATGAAAGTGGTAGTGTACGTGGTCGCATGGTCGCTAAAT ACGTCAATAGCGATTCATACCAAGAGCTTTACCAAGACCGCAAAACCATTCTTTACGGTGTTATCGATACTGATATCACA GATAACACTATGTTGCGCGTGGGGGGCAGTTACAACAACAATAACCCAAAAGGCGCCATGTGGGGAGCATTGCAAGCCGT ATACAGCGATGGCACTCCTACCGATTGGGATGTTTCAGCTACAACGGCAGCAGATTGGAGTCGCTGGGAAACCACCAACG TAAACTACTTTGCAAACCTCAATCATTATTTCAACAATGGCTGGCAACTGGTGGCGAACTACAACCGTATGGAGTATGAA ACCACCACTAAAATGATCTACATGTCTGGTTTGCTTGATAAAGAAACGGGGGCAGGATTGAGTGGTCAGCGTTATCACAG CCACGGTGAGAGCAACTCTGATAATTTCGATTTGCAGCTGAAAGGGGATTATCAACTGTTCAATCGTGAACATGAGTTTG TCGTCGGTGCTTTATACAGTAAACAAAAATCCTATACGGATACTTTCGAACCCATTCGGGATAATATGAGCGGTTACGAT AACAAGCCCGTAGATAACTTTTACGAATGGCAAAACAATGCATTTGCAGAGCCTGAATGGTCAACGGACGCCAATCGTCA GCTTAAAATGGACACTGAGCAGAAAGGTTTTTACGCTGCAACCCGTTTCACCATTACTGAAGCCTTAAAAATCATTGCTG GCGGCCGGATTTCCAGCTGGAATCGTGAAGGAGTGAGCTACGGCACTGATACCAACTTTGGTGATGATGGGGTGTTTGTA CCTTATGTCGGTGCCTTATATGACATTAGTGAGCAACATCGTGCCTACGCGAGTTATACCGAAATATTTAATCCGCAAAA TGTGACTAATGCTTATGGAGAGTATCTCGACCCATTAAAAGGTAAAGCTTATGAAATTGGTCTGAAGAGTGCTTATCTTG ACGATCGTCTGCACACAACTGTCGCGCTATTTAAAATTGATCAAGACAACCTAGCAACGCCAAATGGAATAGTCATAATT GATGGCAAACCCGTTACTAATTACAAAGCTGCTCAAGGTACTGAAAGTACAGGTTTCGAGTTAGAAGTGGTAGGTGAGTT TATTGATGGTTGGAATATCACAGCTGGCTATTCTCAGTTTACCGCAGAAGATGTGGAAGGAAACAGGATGGCAACCACAA GCCCACGTAAACAGTTTAAGCTATTTACCACGTATCAGTTTGTCGATTATCTGCCTGAGTTAACCGTGGGTGGTGGTATT AATTGGCAAAGTGACAGTTACTCTGAAGGCGGCACAGTAAAAATAGATCAGGAGGCTTACTCCCTCGTTAACCTGATGGC CCGTTATAACCTCGCCGATAATATGGATCTGCAACTTAACGTGGAGAATTTATTAGACGAGAAATACTACGCTTATATGT CAGCCTCATCCTCAATGTCCGAAGCTTATAGCGTGTATCACTATGGCACGCCACGTAATGTGACCTTGAGTTTTAATTAC CGCTTTTAA
Upstream 100 bases:
>100_bases GTCAATAGCAAATATGTTATCCGAATCACTAAAATACAAATAAAAGTGATTCGCAATAGTGTTACCGTATTGCCACTCTA AATAAATTATCCAACTAACT
Downstream 100 bases:
>100_bases GTTTTCCGCTAAACAGCGGTAGCCGAGTGATCGGCTACTTCTCCTGCATATTCTATTATTGCTAATGTTTTGATTGCTCG AGCTAGTTCGTATTAACGAC
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Outer-membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid [H]
Number of amino acids: Translated: 722; Mature: 722
Protein sequence:
>722_residues MQFNLLPLAAAVALALNPLLVLAEEQSTPDLQDQNIEKITVMGKYTVSKTIDTATGLGLSLMETPQSVSILTAERIQDQA LNTVVDVVNNAVGLSSSKTDNVRNGFNSRGFSVQNYQIDGVPLSWSLGGDAGETVSDVSLYERVEVVRGATGLLTGAGDP SASINLVRKHADSSDLKGYINVTTGSWDKKQITADVSNGLNESGSVRGRMVAKYVNSDSYQELYQDRKTILYGVIDTDIT DNTMLRVGGSYNNNNPKGAMWGALQAVYSDGTPTDWDVSATTAADWSRWETTNVNYFANLNHYFNNGWQLVANYNRMEYE TTTKMIYMSGLLDKETGAGLSGQRYHSHGESNSDNFDLQLKGDYQLFNREHEFVVGALYSKQKSYTDTFEPIRDNMSGYD NKPVDNFYEWQNNAFAEPEWSTDANRQLKMDTEQKGFYAATRFTITEALKIIAGGRISSWNREGVSYGTDTNFGDDGVFV PYVGALYDISEQHRAYASYTEIFNPQNVTNAYGEYLDPLKGKAYEIGLKSAYLDDRLHTTVALFKIDQDNLATPNGIVII DGKPVTNYKAAQGTESTGFELEVVGEFIDGWNITAGYSQFTAEDVEGNRMATTSPRKQFKLFTTYQFVDYLPELTVGGGI NWQSDSYSEGGTVKIDQEAYSLVNLMARYNLADNMDLQLNVENLLDEKYYAYMSASSSMSEAYSVYHYGTPRNVTLSFNY RF
Sequences:
>Translated_722_residues MQFNLLPLAAAVALALNPLLVLAEEQSTPDLQDQNIEKITVMGKYTVSKTIDTATGLGLSLMETPQSVSILTAERIQDQA LNTVVDVVNNAVGLSSSKTDNVRNGFNSRGFSVQNYQIDGVPLSWSLGGDAGETVSDVSLYERVEVVRGATGLLTGAGDP SASINLVRKHADSSDLKGYINVTTGSWDKKQITADVSNGLNESGSVRGRMVAKYVNSDSYQELYQDRKTILYGVIDTDIT DNTMLRVGGSYNNNNPKGAMWGALQAVYSDGTPTDWDVSATTAADWSRWETTNVNYFANLNHYFNNGWQLVANYNRMEYE TTTKMIYMSGLLDKETGAGLSGQRYHSHGESNSDNFDLQLKGDYQLFNREHEFVVGALYSKQKSYTDTFEPIRDNMSGYD NKPVDNFYEWQNNAFAEPEWSTDANRQLKMDTEQKGFYAATRFTITEALKIIAGGRISSWNREGVSYGTDTNFGDDGVFV PYVGALYDISEQHRAYASYTEIFNPQNVTNAYGEYLDPLKGKAYEIGLKSAYLDDRLHTTVALFKIDQDNLATPNGIVII DGKPVTNYKAAQGTESTGFELEVVGEFIDGWNITAGYSQFTAEDVEGNRMATTSPRKQFKLFTTYQFVDYLPELTVGGGI NWQSDSYSEGGTVKIDQEAYSLVNLMARYNLADNMDLQLNVENLLDEKYYAYMSASSSMSEAYSVYHYGTPRNVTLSFNY RF >Mature_722_residues MQFNLLPLAAAVALALNPLLVLAEEQSTPDLQDQNIEKITVMGKYTVSKTIDTATGLGLSLMETPQSVSILTAERIQDQA LNTVVDVVNNAVGLSSSKTDNVRNGFNSRGFSVQNYQIDGVPLSWSLGGDAGETVSDVSLYERVEVVRGATGLLTGAGDP SASINLVRKHADSSDLKGYINVTTGSWDKKQITADVSNGLNESGSVRGRMVAKYVNSDSYQELYQDRKTILYGVIDTDIT DNTMLRVGGSYNNNNPKGAMWGALQAVYSDGTPTDWDVSATTAADWSRWETTNVNYFANLNHYFNNGWQLVANYNRMEYE TTTKMIYMSGLLDKETGAGLSGQRYHSHGESNSDNFDLQLKGDYQLFNREHEFVVGALYSKQKSYTDTFEPIRDNMSGYD NKPVDNFYEWQNNAFAEPEWSTDANRQLKMDTEQKGFYAATRFTITEALKIIAGGRISSWNREGVSYGTDTNFGDDGVFV PYVGALYDISEQHRAYASYTEIFNPQNVTNAYGEYLDPLKGKAYEIGLKSAYLDDRLHTTVALFKIDQDNLATPNGIVII DGKPVTNYKAAQGTESTGFELEVVGEFIDGWNITAGYSQFTAEDVEGNRMATTSPRKQFKLFTTYQFVDYLPELTVGGGI NWQSDSYSEGGTVKIDQEAYSLVNLMARYNLADNMDLQLNVENLLDEKYYAYMSASSSMSEAYSVYHYGTPRNVTLSFNY RF
Specific function: Required for the uptake of Fe(3+) via coprogen, ferrioxamine B, and rhodotorulic acid [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=735, Percent_Identity=36.3265306122449, Blast_Score=454, Evalue=1e-128, Organism=Escherichia coli, GI1786344, Length=726, Percent_Identity=24.7933884297521, Blast_Score=106, Evalue=6e-24, Organism=Escherichia coli, GI1787024, Length=262, Percent_Identity=29.7709923664122, Blast_Score=80, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80265; Mature: 80265
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFNLLPLAAAVALALNPLLVLAEEQSTPDLQDQNIEKITVMGKYTVSKTIDTATGLGLS CCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEHHHHHHHCCCCEE LMETPQSVSILTAERIQDQALNTVVDVVNNAVGLSSSKTDNVRNGFNSRGFSVQNYQIDG ECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEEEEECC VPLSWSLGGDAGETVSDVSLYERVEVVRGATGLLTGAGDPSASINLVRKHADSSDLKGYI EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHEEECCCCCCCCEEE NVTTGSWDKKQITADVSNGLNESGSVRGRMVAKYVNSDSYQELYQDRKTILYGVIDTDIT EEEECCCCCCEEEEHHHCCCCCCCCCCCEEEEEHHCCCHHHHHHHCCCEEEEEEEECCCC DNTMLRVGGSYNNNNPKGAMWGALQAVYSDGTPTDWDVSATTAADWSRWETTNVNYFANL CCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEC NHYFNNGWQLVANYNRMEYETTTKMIYMSGLLDKETGAGLSGQRYHSHGESNSDNFDLQL CHHHCCCEEEEEECCCEEEHHHHEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCEEEEE KGDYQLFNREHEFVVGALYSKQKSYTDTFEPIRDNMSGYDNKPVDNFYEWQNNAFAEPEW ECCHHHHCCCCCEEEEEHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCC STDANRQLKMDTEQKGFYAATRFTITEALKIIAGGRISSWNREGVSYGTDTNFGDDGVFV CCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEC PYVGALYDISEQHRAYASYTEIFNPQNVTNAYGEYLDPLKGKAYEIGLKSAYLDDRLHTT CCHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHCCHHEEE VALFKIDQDNLATPNGIVIIDGKPVTNYKAAQGTESTGFELEVVGEFIDGWNITAGYSQF EEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCEECCCCCC TAEDVEGNRMATTSPRKQFKLFTTYQFVDYLPELTVGGGINWQSDSYSEGGTVKIDQEAY CCCCCCCCEEECCCCHHHEEEEEHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEECHHHH SLVNLMARYNLADNMDLQLNVENLLDEKYYAYMSASSSMSEAYSVYHYGTPRNVTLSFNY HHHHHHHHCCCCCCCEEEEEHHHHHCHHHHEEEECCCCHHHHEEEEEECCCCEEEEEEEE RF CC >Mature Secondary Structure MQFNLLPLAAAVALALNPLLVLAEEQSTPDLQDQNIEKITVMGKYTVSKTIDTATGLGLS CCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEHHHHHHHCCCCEE LMETPQSVSILTAERIQDQALNTVVDVVNNAVGLSSSKTDNVRNGFNSRGFSVQNYQIDG ECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEEEEECC VPLSWSLGGDAGETVSDVSLYERVEVVRGATGLLTGAGDPSASINLVRKHADSSDLKGYI EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHEEECCCCCCCCEEE NVTTGSWDKKQITADVSNGLNESGSVRGRMVAKYVNSDSYQELYQDRKTILYGVIDTDIT EEEECCCCCCEEEEHHHCCCCCCCCCCCEEEEEHHCCCHHHHHHHCCCEEEEEEEECCCC DNTMLRVGGSYNNNNPKGAMWGALQAVYSDGTPTDWDVSATTAADWSRWETTNVNYFANL CCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEC NHYFNNGWQLVANYNRMEYETTTKMIYMSGLLDKETGAGLSGQRYHSHGESNSDNFDLQL CHHHCCCEEEEEECCCEEEHHHHEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCEEEEE KGDYQLFNREHEFVVGALYSKQKSYTDTFEPIRDNMSGYDNKPVDNFYEWQNNAFAEPEW ECCHHHHCCCCCEEEEEHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCC STDANRQLKMDTEQKGFYAATRFTITEALKIIAGGRISSWNREGVSYGTDTNFGDDGVFV CCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEC PYVGALYDISEQHRAYASYTEIFNPQNVTNAYGEYLDPLKGKAYEIGLKSAYLDDRLHTT CCHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHCCHHEEE VALFKIDQDNLATPNGIVIIDGKPVTNYKAAQGTESTGFELEVVGEFIDGWNITAGYSQF EEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCEECCCCCC TAEDVEGNRMATTSPRKQFKLFTTYQFVDYLPELTVGGGINWQSDSYSEGGTVKIDQEAY CCCCCCCCEEECCCCHHHEEEEEHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEECHHHH SLVNLMARYNLADNMDLQLNVENLLDEKYYAYMSASSSMSEAYSVYHYGTPRNVTLSFNY HHHHHHHHCCCCCCCEEEEEHHHHHCHHHHEEEECCCCHHHHEEEEEECCCCEEEEEEEE RF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2162465; 8905232; 9278503; 3032906 [H]