| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174238
Identifier: 126174238
GI number: 126174238
Start: 2337837
End: 2338637
Strand: Direct
Name: 126174238
Synonym: Sbal_2016
Alternate gene names: NA
Gene position: 2337837-2338637 (Clockwise)
Preceding gene: 126174237
Following gene: 126174239
Centisome position: 45.6
GC content: 45.69
Gene sequence:
>801_bases ATGACTCGAAAGCACAAATCACAAACAATACCGACTATTCGCTACAAACTTGCCCGCGCACTTCGCCCTTGGCACCGTAG GCTGGGTATCTTAAGCTGTTTATTTATCCTATTGCTCGTCGTGACGGGTGTAGCCATCAATCACAGCCAAGCACTGCAGC TGAATAAATCCCCTGTGCAACAAACGTGGTTGTTGGATTATTACGGAATTGCGCCCCCCTATCATATTGCCCAATTTGGC AGTGAAGCCCAGCCGCTATTTGTCACAGATAACCGGCTTTGGCTAGGCCATGAACCAATACTCGAGGCTCAAAGCCAATT AATTAGTGCGGCATTTTTATCTAATCTATTGATAGCTATTGATAATAATCAACTTTATCTGTTTGATAGCCAAGGGCACT TACAGGAAACTCAAAATAGCAGCACAGGTTTACCAAAGGGTTTAGAGGCCTTAGCCATAGAGTCGTTCACTCTCGATGCA ACTCGTCTCGAAACAGTCAATCGTGTTTGGCTTAAAACCACTTCAGGCTATTATCAAACAGATGAAAATCTTATCGATTG GATACCTGCGCAGCCATTAGCACCATTGCATTGGGTTACGCCAAAGGGTCCAGTAGACGCTGATTTGATTCAATACGCCC GCAGCGCCAACCTCAACTGGGAAAGAGTGATGCTAGATCTACATAGCGGCCGCTTATTTGGAGCCTACGCCGTATGGATA TGGGATATTTTCGGATTGGCATTGTTGTTGGTATCGCTGAGTGGTCTTTGGCTCTGGGTAAAGCAAACTAAACCTCGGTG A
Upstream 100 bases:
>100_bases CCTTGACGAAACTATCTCGTATTGCTTTATGGCTCCATAACCATGTTACCAAAGCCGAAATGAGTCAATAATAGTCAACT AACCAGACGTAAATGTAACT
Downstream 100 bases:
>100_bases TAAACTATTTAATGGAGTTGGGCTTACGAGCCATAACGGCAACATGAAGGTTTCTGGGATTCTGAACATTATCGCCATTA TTTAGTTCCAATCTTTCCTC
Product: PepSY-associated TM helix domain-containing protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Family; PepSY-Associated TM Helix Family Protein; PepSY-Associated TM Helix Domain Protein
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTRKHKSQTIPTIRYKLARALRPWHRRLGILSCLFILLLVVTGVAINHSQALQLNKSPVQQTWLLDYYGIAPPYHIAQFG SEAQPLFVTDNRLWLGHEPILEAQSQLISAAFLSNLLIAIDNNQLYLFDSQGHLQETQNSSTGLPKGLEALAIESFTLDA TRLETVNRVWLKTTSGYYQTDENLIDWIPAQPLAPLHWVTPKGPVDADLIQYARSANLNWERVMLDLHSGRLFGAYAVWI WDIFGLALLLVSLSGLWLWVKQTKPR
Sequences:
>Translated_266_residues MTRKHKSQTIPTIRYKLARALRPWHRRLGILSCLFILLLVVTGVAINHSQALQLNKSPVQQTWLLDYYGIAPPYHIAQFG SEAQPLFVTDNRLWLGHEPILEAQSQLISAAFLSNLLIAIDNNQLYLFDSQGHLQETQNSSTGLPKGLEALAIESFTLDA TRLETVNRVWLKTTSGYYQTDENLIDWIPAQPLAPLHWVTPKGPVDADLIQYARSANLNWERVMLDLHSGRLFGAYAVWI WDIFGLALLLVSLSGLWLWVKQTKPR >Mature_265_residues TRKHKSQTIPTIRYKLARALRPWHRRLGILSCLFILLLVVTGVAINHSQALQLNKSPVQQTWLLDYYGIAPPYHIAQFGS EAQPLFVTDNRLWLGHEPILEAQSQLISAAFLSNLLIAIDNNQLYLFDSQGHLQETQNSSTGLPKGLEALAIESFTLDAT RLETVNRVWLKTTSGYYQTDENLIDWIPAQPLAPLHWVTPKGPVDADLIQYARSANLNWERVMLDLHSGRLFGAYAVWIW DIFGLALLLVSLSGLWLWVKQTKPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30232; Mature: 30101
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKHKSQTIPTIRYKLARALRPWHRRLGILSCLFILLLVVTGVAINHSQALQLNKSPVQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCH QTWLLDYYGIAPPYHIAQFGSEAQPLFVTDNRLWLGHEPILEAQSQLISAAFLSNLLIAI HHHHHHHHCCCCCHHHHHCCCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHCEEEEE DNNQLYLFDSQGHLQETQNSSTGLPKGLEALAIESFTLDATRLETVNRVWLKTTSGYYQT ECCEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHEECCHHHHHHHHHEEEEECCCCEEC DENLIDWIPAQPLAPLHWVTPKGPVDADLIQYARSANLNWERVMLDLHSGRLFGAYAVWI CCCHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHHH WDIFGLALLLVSLSGLWLWVKQTKPR HHHHHHHHHHHHHCCEEEEEEECCCC >Mature Secondary Structure TRKHKSQTIPTIRYKLARALRPWHRRLGILSCLFILLLVVTGVAINHSQALQLNKSPVQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCH QTWLLDYYGIAPPYHIAQFGSEAQPLFVTDNRLWLGHEPILEAQSQLISAAFLSNLLIAI HHHHHHHHCCCCCHHHHHCCCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHCEEEEE DNNQLYLFDSQGHLQETQNSSTGLPKGLEALAIESFTLDATRLETVNRVWLKTTSGYYQT ECCEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHEECCHHHHHHHHHEEEEECCCCEEC DENLIDWIPAQPLAPLHWVTPKGPVDADLIQYARSANLNWERVMLDLHSGRLFGAYAVWI CCCHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHHH WDIFGLALLLVSLSGLWLWVKQTKPR HHHHHHHHHHHHHCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA