Definition | Shewanella baltica OS155 chromosome, complete genome. |
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Accession | NC_009052 |
Length | 5,127,376 |
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The map label for this gene is 126174225
Identifier: 126174225
GI number: 126174225
Start: 2322447
End: 2323820
Strand: Direct
Name: 126174225
Synonym: Sbal_2001
Alternate gene names: NA
Gene position: 2322447-2323820 (Clockwise)
Preceding gene: 126174224
Following gene: 126174226
Centisome position: 45.3
GC content: 49.56
Gene sequence:
>1374_bases ATGCCGATGTCGCGCCATAAACCCATTTTAGCGCTTTGCCTTGTTGTCACTACGCTGTTTGCCAGTGTGACGTCTGTATT GGCCGTCGAGGTTGAAACCGCTAAAAAAGTCGTCAAGCCGCCCAAGGCCGCGCCGATTATAGGATTGGAGACGGCTTCTG AGCTTAAAAACCGTTTTCGCATCGACCATATGGTCGATAACATGACGCTGTTAGTGGAGCGTGAATACGGCTCTGCACCG GTAGTCATTGTGTTGCCCGATGGCAGTAAATGGTACGCCAATCGCCATCCCGAAACCGTTAAGTGGGTCGATGGCATTAC CGGCGATATTATTTACATTGAGTCGCCTATGCCTGGACCTTGGCAGTTGGTGGGTAAAGTCGTCCCGGGTTCGACCCTCA AAAAACTCTCTAAACTCGAAATCGAAGTGCAGCCTTTGCCGCAGCCGCTATTCCAAGGTGAGCAAGTTAAAATTGTCGCC CAGTTGATGGGTGATGCTCAGCGTGTGCGCATGCCGGGACTCGACTTTCTGGTGGAATGGACGGCTCATTTTGTGAGTAA GCACAGGGCCGGCGATGAGAACTTTGCCGCGGGTGACATTATTGTTGGTTCCTATAAAGACAATGGTGAAGATTATGATG AAAAACCCGATGATGGCGTATTTACCAGTAATCTCAATGTAAAGCAGCCTTGGGGTGATTATGAGTTTGTGGTGCAAGCA CGCAACAACGTGTTTGAGCGGCAGATTTCATTTCCGTTTAGATTATCGCCGCGGCCAATTAATTTAGAAGTCATTACCCC AGACGATCCGTTAACGGGGCAGTGGAAAATCATGCTGCACGTCGATAGTGCTGTGCTGCAACTGGCTGAAACGCATTTTT CCTTTGAGCTAGTGGGCCCTGCGGGCTTGCAACTGCCTTTGACCGTTAATGGTCTTACAGAGCCGGACTCTGAATTAGAT TTACCGACTGTGACTGAGTTTGGTAGTTATCGAATTAAAGGTTTCGTGGCGACGACGACGATTACGGGTCGAGAAATCGT ACTGGATTTGCCAGAACTGTTTTTCAACTTAATTCAGCCGCCAGAGCCGCCACCAAGCGCTGAAGAGTTGGCCGCCGTTG CTGCACAAAAAGCCGCAGAGGAAGAAGAACTTGCGAAGAAAGATGCCATGTTCTGGATCATCACTATCAACGCGATCTTA TTAGTCTTGGGTGTCGTGGGATTAATTGTGTGGCGTAAACGCCAAAGTTTAGCGCAGGCCTTAGCTGCCGCTGAGTTACG TTTATTGGAGGAAGCATCGGCGAATCCAGCTGCTGCGCCGTCATTAGATGAAATCGATCTCACTATGCCAGATGAGGCGG ATAAAGACCGTTAG
Upstream 100 bases:
>100_bases GTGATCGGCGCTTCGGCCGATGAATTGACTATGCATGAACAACGCCTTGATTTAGTCGCGAAATCAGGCAAATGCCTCTG GAGAGGATAGAAAAATCACT
Downstream 100 bases:
>100_bases CCAAGTATCGCTGATGTGTTTGAGTTATGACTTTGAACTAGGGCGTAGAGCAATATTTGGCACATAAATCAAGGTCGGAA ATTGATTTGGTTTTTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MPMSRHKPILALCLVVTTLFASVTSVLAVEVETAKKVVKPPKAAPIIGLETASELKNRFRIDHMVDNMTLLVEREYGSAP VVIVLPDGSKWYANRHPETVKWVDGITGDIIYIESPMPGPWQLVGKVVPGSTLKKLSKLEIEVQPLPQPLFQGEQVKIVA QLMGDAQRVRMPGLDFLVEWTAHFVSKHRAGDENFAAGDIIVGSYKDNGEDYDEKPDDGVFTSNLNVKQPWGDYEFVVQA RNNVFERQISFPFRLSPRPINLEVITPDDPLTGQWKIMLHVDSAVLQLAETHFSFELVGPAGLQLPLTVNGLTEPDSELD LPTVTEFGSYRIKGFVATTTITGREIVLDLPELFFNLIQPPEPPPSAEELAAVAAQKAAEEEELAKKDAMFWIITINAIL LVLGVVGLIVWRKRQSLAQALAAAELRLLEEASANPAAAPSLDEIDLTMPDEADKDR
Sequences:
>Translated_457_residues MPMSRHKPILALCLVVTTLFASVTSVLAVEVETAKKVVKPPKAAPIIGLETASELKNRFRIDHMVDNMTLLVEREYGSAP VVIVLPDGSKWYANRHPETVKWVDGITGDIIYIESPMPGPWQLVGKVVPGSTLKKLSKLEIEVQPLPQPLFQGEQVKIVA QLMGDAQRVRMPGLDFLVEWTAHFVSKHRAGDENFAAGDIIVGSYKDNGEDYDEKPDDGVFTSNLNVKQPWGDYEFVVQA RNNVFERQISFPFRLSPRPINLEVITPDDPLTGQWKIMLHVDSAVLQLAETHFSFELVGPAGLQLPLTVNGLTEPDSELD LPTVTEFGSYRIKGFVATTTITGREIVLDLPELFFNLIQPPEPPPSAEELAAVAAQKAAEEEELAKKDAMFWIITINAIL LVLGVVGLIVWRKRQSLAQALAAAELRLLEEASANPAAAPSLDEIDLTMPDEADKDR >Mature_456_residues PMSRHKPILALCLVVTTLFASVTSVLAVEVETAKKVVKPPKAAPIIGLETASELKNRFRIDHMVDNMTLLVEREYGSAPV VIVLPDGSKWYANRHPETVKWVDGITGDIIYIESPMPGPWQLVGKVVPGSTLKKLSKLEIEVQPLPQPLFQGEQVKIVAQ LMGDAQRVRMPGLDFLVEWTAHFVSKHRAGDENFAAGDIIVGSYKDNGEDYDEKPDDGVFTSNLNVKQPWGDYEFVVQAR NNVFERQISFPFRLSPRPINLEVITPDDPLTGQWKIMLHVDSAVLQLAETHFSFELVGPAGLQLPLTVNGLTEPDSELDL PTVTEFGSYRIKGFVATTTITGREIVLDLPELFFNLIQPPEPPPSAEELAAVAAQKAAEEEELAKKDAMFWIITINAILL VLGVVGLIVWRKRQSLAQALAAAELRLLEEASANPAAAPSLDEIDLTMPDEADKDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50435; Mature: 50303
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMSRHKPILALCLVVTTLFASVTSVLAVEVETAKKVVKPPKAAPIIGLETASELKNRFR CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCCCCCEEECCCHHHHHHHHH IDHMVDNMTLLVEREYGSAPVVIVLPDGSKWYANRHPETVKWVDGITGDIIYIESPMPGP HHHHHCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCH WQLVGKVVPGSTLKKLSKLEIEVQPLPQPLFQGEQVKIVAQLMGDAQRVRMPGLDFLVEW HHHHEECCCCHHHHHHHHCEEEEECCCHHHHCCCHHHHHHHHHCCHHHCCCCCHHHHHHH TAHFVSKHRAGDENFAAGDIIVGSYKDNGEDYDEKPDDGVFTSNLNVKQPWGDYEFVVQA HHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHEEH RNNVFERQISFPFRLSPRPINLEVITPDDPLTGQWKIMLHVDSAVLQLAETHFSFELVGP HHHHHHHHCCCCEEECCCCEEEEEECCCCCCCCCEEEEEEECHHHHHHHHHCCEEEEECC AGLQLPLTVNGLTEPDSELDLPTVTEFGSYRIKGFVATTTITGREIVLDLPELFFNLIQP CCCEEEEEECCCCCCCCCCCCCCHHCCCCEEEEEEEEEEEECCCCEEEEHHHHHHHHCCC PEPPPSAEELAAVAAQKAAEEEELAKKDAMFWIITINAILLVLGVVGLIVWRKRQSLAQA CCCCCCHHHHHHHHHHHHCCHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LAAAELRLLEEASANPAAAPSLDEIDLTMPDEADKDR HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCC >Mature Secondary Structure PMSRHKPILALCLVVTTLFASVTSVLAVEVETAKKVVKPPKAAPIIGLETASELKNRFR CCCCCCHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCCCCCEEECCCHHHHHHHHH IDHMVDNMTLLVEREYGSAPVVIVLPDGSKWYANRHPETVKWVDGITGDIIYIESPMPGP HHHHHCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCH WQLVGKVVPGSTLKKLSKLEIEVQPLPQPLFQGEQVKIVAQLMGDAQRVRMPGLDFLVEW HHHHEECCCCHHHHHHHHCEEEEECCCHHHHCCCHHHHHHHHHCCHHHCCCCCHHHHHHH TAHFVSKHRAGDENFAAGDIIVGSYKDNGEDYDEKPDDGVFTSNLNVKQPWGDYEFVVQA HHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHEEH RNNVFERQISFPFRLSPRPINLEVITPDDPLTGQWKIMLHVDSAVLQLAETHFSFELVGP HHHHHHHHCCCCEEECCCCEEEEEECCCCCCCCCEEEEEEECHHHHHHHHHCCEEEEECC AGLQLPLTVNGLTEPDSELDLPTVTEFGSYRIKGFVATTTITGREIVLDLPELFFNLIQP CCCEEEEEECCCCCCCCCCCCCCHHCCCCEEEEEEEEEEEECCCCEEEEHHHHHHHHCCC PEPPPSAEELAAVAAQKAAEEEELAKKDAMFWIITINAILLVLGVVGLIVWRKRQSLAQA CCCCCCHHHHHHHHHHHHCCHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LAAAELRLLEEASANPAAAPSLDEIDLTMPDEADKDR HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA