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The map label for this gene is yeiE [H]

Identifier: 126174222

GI number: 126174222

Start: 2320045

End: 2320983

Strand: Direct

Name: yeiE [H]

Synonym: Sbal_1998

Alternate gene names: 126174222

Gene position: 2320045-2320983 (Clockwise)

Preceding gene: 126174221

Following gene: 126174224

Centisome position: 45.25

GC content: 50.27

Gene sequence:

>939_bases
ATGCGGATCACCTTAAGACAACTGGCGGTATTTGAGGCTGTGGCTCGTAGCGGCCAAGTCGCAAAGGCGGCGGAGCAAGT
TAATTTATCACCACCGGCCACTTCTATGGCCTTGGCTGAGTTAGAAAAACAGCTTAATGCCCGCCTCTTCGAGCGCATTG
GCAATCGATTACAGCTGAACTCGCAGGGCAATTTATTGTTGCCACTGGCGACGGATTTATTGCACCGTGTCGAGCAAATT
GAGCAGGCATTTACCTATCATGGTGGCGATTTGGTTGGGCGGTTAAGTATCAGTGCCAGTTCGACCATTGGTAACTATCT
GATGGCGAAAGCCGCAGTGGCATTTTGTCAGCAGCACACTCAAACCCATGTGGATGTGGCGATCACAAATACTCAAGATG
TGATCCAAGCGGTTGCGCAGTTCCGCTCTGAAATGGGCTTTATTGAAGGTCATTGCACCGATAATCGCTTGAGTGTTGAA
GCTTGGCATAAGGATAGGCTGCTGGTGTTTTGTCATCCGGCGCATCCTCTGGCGGGGAAAGTGGTTAAACCGGCGCAAGT
GAGAGGCCATTCATGGGTGTTACGTGAAGAAGGCTCGGGCACTCGTGAGTATTTTGTCAATGCCGCCAATGAGTTGGATA
TGCAGCCAGAAGCCAAATTCTGCTTTACTACGCCGGATGCAATCAAACTGGCGGTGAAACAAGGTGCTGGGCTTGGGGTA
TTATCTGAGCTGGCGCTGGAGAAAGAAATCAGCCGCAAAGAGTTGGCGTTAGTCACGATTGAGGGATTAGTGCTGGAGCG
GCAGTTTTATCGCATCACCCATAAGAGCCGTCAGGCGACATCCCTTGGCCAAGCTTTTGTGCAGTTCTGTGAGAATTTTT
TCAATATCGCAGGCGTGGAACCAAATAAGCCGTTTGATAGCAATGGCCATATGCAGTGA

Upstream 100 bases:

>100_bases
AACGAATTGGACCACGGCACCGACCGCGGGACGTTCAGGGCATTTATCAGAGCATTCGGAAAACTGATAAGCCATTTCCT
TTTTAAGTACAGGTTTTAAT

Downstream 100 bases:

>100_bases
GCTTAAGCGGTTAATTTGAACTGTGGGTTTACGGTGAGATGAATAGTGAAATAAATCATCAAGCCTAAGTGTTTAGCTTA
GGCGTGATGGCATAGAACTT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MRITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLNSQGNLLLPLATDLLHRVEQI
EQAFTYHGGDLVGRLSISASSTIGNYLMAKAAVAFCQQHTQTHVDVAITNTQDVIQAVAQFRSEMGFIEGHCTDNRLSVE
AWHKDRLLVFCHPAHPLAGKVVKPAQVRGHSWVLREEGSGTREYFVNAANELDMQPEAKFCFTTPDAIKLAVKQGAGLGV
LSELALEKEISRKELALVTIEGLVLERQFYRITHKSRQATSLGQAFVQFCENFFNIAGVEPNKPFDSNGHMQ

Sequences:

>Translated_312_residues
MRITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLNSQGNLLLPLATDLLHRVEQI
EQAFTYHGGDLVGRLSISASSTIGNYLMAKAAVAFCQQHTQTHVDVAITNTQDVIQAVAQFRSEMGFIEGHCTDNRLSVE
AWHKDRLLVFCHPAHPLAGKVVKPAQVRGHSWVLREEGSGTREYFVNAANELDMQPEAKFCFTTPDAIKLAVKQGAGLGV
LSELALEKEISRKELALVTIEGLVLERQFYRITHKSRQATSLGQAFVQFCENFFNIAGVEPNKPFDSNGHMQ
>Mature_312_residues
MRITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLNSQGNLLLPLATDLLHRVEQI
EQAFTYHGGDLVGRLSISASSTIGNYLMAKAAVAFCQQHTQTHVDVAITNTQDVIQAVAQFRSEMGFIEGHCTDNRLSVE
AWHKDRLLVFCHPAHPLAGKVVKPAQVRGHSWVLREEGSGTREYFVNAANELDMQPEAKFCFTTPDAIKLAVKQGAGLGV
LSELALEKEISRKELALVTIEGLVLERQFYRITHKSRQATSLGQAFVQFCENFFNIAGVEPNKPFDSNGHMQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=295, Percent_Identity=37.2881355932203, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1787601, Length=299, Percent_Identity=24.7491638795987, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787530, Length=248, Percent_Identity=24.5967741935484, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788748, Length=303, Percent_Identity=24.4224422442244, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87081904, Length=207, Percent_Identity=28.9855072463768, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI145693105, Length=255, Percent_Identity=22.7450980392157, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787128, Length=299, Percent_Identity=24.4147157190635, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789639, Length=274, Percent_Identity=22.2627737226277, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34505; Mature: 34505

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLN
CEEHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEC
SQGNLLLPLATDLLHRVEQIEQAFTYHGGDLVGRLSISASSTIGNYLMAKAAVAFCQQHT
CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHC
QTHVDVAITNTQDVIQAVAQFRSEMGFIEGHCTDNRLSVEAWHKDRLLVFCHPAHPLAGK
CCEEEEEEECHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCEEEEEECCCCCCCC
VVKPAQVRGHSWVLREEGSGTREYFVNAANELDMQPEAKFCFTTPDAIKLAVKQGAGLGV
CCCCHHCCCCEEEEEECCCCHHHHHHHCHHHCCCCCCCCEEEECCHHHHHHHHCCCCCHH
LSELALEKEISRKELALVTIEGLVLERQFYRITHKSRQATSLGQAFVQFCENFFNIAGVE
HHHHHHHHHHCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PNKPFDSNGHMQ
CCCCCCCCCCCC
>Mature Secondary Structure
MRITLRQLAVFEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLN
CEEHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEC
SQGNLLLPLATDLLHRVEQIEQAFTYHGGDLVGRLSISASSTIGNYLMAKAAVAFCQQHT
CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHC
QTHVDVAITNTQDVIQAVAQFRSEMGFIEGHCTDNRLSVEAWHKDRLLVFCHPAHPLAGK
CCEEEEEEECHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCEEEEEECCCCCCCC
VVKPAQVRGHSWVLREEGSGTREYFVNAANELDMQPEAKFCFTTPDAIKLAVKQGAGLGV
CCCCHHCCCCEEEEEECCCCHHHHHHHCHHHCCCCCCCCEEEECCHHHHHHHHCCCCCHH
LSELALEKEISRKELALVTIEGLVLERQFYRITHKSRQATSLGQAFVQFCENFFNIAGVE
HHHHHHHHHHCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PNKPFDSNGHMQ
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]