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The map label for this gene is ssaT [H]

Identifier: 126174200

GI number: 126174200

Start: 2289557

End: 2290357

Strand: Direct

Name: ssaT [H]

Synonym: Sbal_1976

Alternate gene names: 126174200

Gene position: 2289557-2290357 (Clockwise)

Preceding gene: 126174199

Following gene: 126174201

Centisome position: 44.65

GC content: 45.57

Gene sequence:

>801_bases
ATGACAACTCTGCTGCCCAATCTGTTAACGGCACAACTTCCTGTATTGGCACTCTGTATGATGCGACCATTAGGCATGAT
GCTGTTATTGCCCCTATTCAAAGGCGGGGCTATGGGTAGCGCATTAATCCGTAATAGCCTGATTTTAATGTTTGCTTTAC
CTACTGTGCTGGCAATGGATGAAATGCAGCCGATACTGCAACAGGCCGACACTTGGATGCTCATCAGCCTATTTGGCAAA
GAAATGATTGTAGGCGTGTTACTTGGTTTTTGCGCCGCTATTCCCTTTTGGGCAATAGATATGGCGGGATTTGTGATTGA
CACCATGCGGGGAGCATCCATGTCGACTGTGCTTAATCCCTTGATGGGACTGCAATCATCGATTTATGGCATGCTGTTTA
CTCAAGTTCTGACAGTGCTGTTTTTAGTCTCGGGTGGTTTTAATTTTCTGTTAACCGCACTCTATCAATCCTATCAACAA
CTTCCCCCAGGATTTAATTTAACGCTAGCCCAACCCTTGATGGTGTTTATAGCCCATGAGTGGCAATTGATGTGCCAACT
TTGCCTCAGTTTTGCCATGCCCGCCATGGTGATTATGATCTTAGTCGATGTCGCCTTAGGGCTAGTAAACCGCTCGGCGC
AGCAGTTAAATGTGTTCTTTTTGTCTATGCCCATTAAAAGCGCTTTGGTCTTACTGTTATTAATCTACAGCCTACAGTTT
GCCTTGTCCCATTACCTGCAGACCATTTCTGGGGTAGAGCAGCACGTAGATATTTTGTTTGGACTCTTAGCAGGGCACTA
G

Upstream 100 bases:

>100_bases
TGTGCGTGACACTCGTGGTCTGTTATCACTGGATGGGCAGCTCACTGTTGAATTACGCCAGCATGGCTTTCGATCAAATT
AGCCAAATGGGGGATTAGTG

Downstream 100 bases:

>100_bases
TGCCCCTGACGGATGTGACCTATGGCCGAGAAAACAGAAAAACCCACAGAAAAACGCTTACGAGAAGCGAGAAATCGCGG
CCAGGTCATTAAAAGTGCAG

Product: type III secretion protein SpaR/YscT/HrcT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MTTLLPNLLTAQLPVLALCMMRPLGMMLLLPLFKGGAMGSALIRNSLILMFALPTVLAMDEMQPILQQADTWMLISLFGK
EMIVGVLLGFCAAIPFWAIDMAGFVIDTMRGASMSTVLNPLMGLQSSIYGMLFTQVLTVLFLVSGGFNFLLTALYQSYQQ
LPPGFNLTLAQPLMVFIAHEWQLMCQLCLSFAMPAMVIMILVDVALGLVNRSAQQLNVFFLSMPIKSALVLLLLIYSLQF
ALSHYLQTISGVEQHVDILFGLLAGH

Sequences:

>Translated_266_residues
MTTLLPNLLTAQLPVLALCMMRPLGMMLLLPLFKGGAMGSALIRNSLILMFALPTVLAMDEMQPILQQADTWMLISLFGK
EMIVGVLLGFCAAIPFWAIDMAGFVIDTMRGASMSTVLNPLMGLQSSIYGMLFTQVLTVLFLVSGGFNFLLTALYQSYQQ
LPPGFNLTLAQPLMVFIAHEWQLMCQLCLSFAMPAMVIMILVDVALGLVNRSAQQLNVFFLSMPIKSALVLLLLIYSLQF
ALSHYLQTISGVEQHVDILFGLLAGH
>Mature_265_residues
TTLLPNLLTAQLPVLALCMMRPLGMMLLLPLFKGGAMGSALIRNSLILMFALPTVLAMDEMQPILQQADTWMLISLFGKE
MIVGVLLGFCAAIPFWAIDMAGFVIDTMRGASMSTVLNPLMGLQSSIYGMLFTQVLTVLFLVSGGFNFLLTALYQSYQQL
PPGFNLTLAQPLMVFIAHEWQLMCQLCLSFAMPAMVIMILVDVALGLVNRSAQQLNVFFLSMPIKSALVLLLLIYSLQFA
LSHYLQTISGVEQHVDILFGLLAGH

Specific function: Part of a type III secretion system [H]

COG id: COG4791

COG function: function code U; Type III secretory pathway, component EscT

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002010
- InterPro:   IPR006304 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 29214; Mature: 29083

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
7.9 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTLLPNLLTAQLPVLALCMMRPLGMMLLLPLFKGGAMGSALIRNSLILMFALPTVLAMD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
EMQPILQQADTWMLISLFGKEMIVGVLLGFCAAIPFWAIDMAGFVIDTMRGASMSTVLNP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LMGLQSSIYGMLFTQVLTVLFLVSGGFNFLLTALYQSYQQLPPGFNLTLAQPLMVFIAHE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
WQLMCQLCLSFAMPAMVIMILVDVALGLVNRSAQQLNVFFLSMPIKSALVLLLLIYSLQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ALSHYLQTISGVEQHVDILFGLLAGH
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]