| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174002
Identifier: 126174002
GI number: 126174002
Start: 2064619
End: 2067255
Strand: Reverse
Name: 126174002
Synonym: Sbal_1775
Alternate gene names: NA
Gene position: 2067255-2064619 (Counterclockwise)
Preceding gene: 126174003
Following gene: 126173993
Centisome position: 40.32
GC content: 44.82
Gene sequence:
>2637_bases GTGATTATGGGAAAAAGTTCGACATCTGAGCCACACACTGCCTTAACCCAATGGCAAAACAGTTTGCCGTTCAAATTTAG CCTTATCCAACTCGTCATTGCCGCTATTTTGATTTGCAGCACAGCTTGGGTCATTCTGAGCATTCAGCGTCAACAAGTGC TTGATCAACAAGCCGTGTTAAACCAGAACTATGGCCAGTTAATCATAGCCAAACTGCAGGAAATGACTTCACAGGTCGAA ACCGTTGTCGGCTCCATTTCCAGTATTGCAACACTTTATCGCTATGATCATGAGCAACTGGTGAAAACCATCCCCAGCTT GCTGACGCTCGATAACCAGCAACGCATCATCTCTGGCGGTGGCGTCTGGCCGGAGCCCGGCGCGTTTAATCAGCAAAAAT TTCGCGATAGCCTATTCTGGGCCCACAATGTAAACGAAGAGTTAGTCGCGATTGATAGCTATAACAAAGACACGTTTCCT AGCTATCACACCGAAGAATGGTATCGCCCGACGCGCTATTTCCCTGCGGGCAAAATTTTCTGGTCAAAATCTTATTTCGA TCCCACCACCCATGAATCCATGATCACGGCTTCAGGCGCTATGTGGATGGACCATCAGTTTATTGGTGCCGCCACTGTGG ATATCAGCTTAGAAAAGCTCAATGCCCTACTACGCAATGCTATGGTCGATGTCAGGGGTTATGTCATTGCCTTAGATCAT CAAAACCAAGTGCTCGCCTATCCCCATGGCAATAATAATCTTCAGCATCAAGCCAATACCAGCCACACCTTTGTCACTTT TAATCATCTCGTTGACCAGCAGCCAGACTTCACCCCCATCGAAGCGGCATTACACAATGCGGATAAAGCCTTTATCGAAG AAGCCGTGGCCGAGCGCGTATTTACCCAAGAACAGATGCAGCATTTGACCCGACTAAGTCATCAAGATGAGCGCGACATG TTAGCCGCCATCGTCAATAACAATGCCTTAAACCATTTCACCACCCCAAAACTACTGACCTCAGTGACCTTAGCCCATGA TCCCATTTTGAAAACGGCGTCCCTGGTTTCGGTATTTTTGATGCCCAATACCTATTGGAAAGTGTTAGTTGTCACCCCGA TTTCGCCACTGCAAGATACCGCCAAACACTTAGTTGAAAAGGTTGGTATTTATTTAGTGTGCATCCAGCTTTTAGGCTTG ATCCTCCTATTCTTACTCCAACACCGGCTGTTTATTACCCCGATTATTGAAATCGTCCAAGCCTTAAAGCGTAATGATTC CGCATCAATTGAACTTAAAGCCAAAGACAGTCACGACGAAATTGGCTTATTAGCCAAGACATTCCTGTCGCGCACTCAAC AACTTGAAGTGGCGATGGCGAGTTTAGATGCTAGTAATCTTGCCCTAGAGCAACAATTGCAGAGTCAGAACCTATTCCAA CTTGAATTAAAGCGCCATAAAGAACAACTAAGGGCTTTGCTGAAATTTTCCCAAAACCTTATCTATGTCAAAGATCTGCA CGGTAAATATATTCTGGTGAATGACAAGTATTGTGAAATTTTAGGCATAGAACGCAGGCGCATTATTGGCGCCTCGGATT TTGAGGTATTTCCCAGCCAATTTGCCCACGAGTATCAACAAAATGATCGGCGCGTACTGCACAATAACGAAGCCATTAAT TTTGAAGAGGCCATCCCCTCGCCACTGGGGAATCTTATTTATATCGTAACCAAATTTAAGATCAAAGATGATGACGATAC TGTGATTGCGGTCGGCGCTATCGCCTTTGATATCACGTTGAAAAAGATTAAAGAGCAAGAACAGGATAAATTACTCTTAG GGCAAGTTGAGACGCTCAATCATCTACAAGAGCAAGTTCGCCTTATTAATCAACATAATAACGAGCTTTACCAAGAGCAA GAAGCATTGACTAAAATGCTTGAGAAGCATCATCAACTCAATCTCAGCCGTGAACAAAGCCAACAGCTAATGCAAAACTT CTTAGCTGAAATGATGACGCAGATCATGCATGAGCAAGATCAGCTACTCGCCAAAGTTTGCCAACTGCAGCAAACGGACG AGGCAAATTACAGAGCTCAGATCACCGAAATCATGGTGACTCAGGCAGAGAAATTGCGGCATATTGCCCAGCTGCTGACC AATCATCAAAACGATATTCGTCCATTACATCTGGCGCAATTTATGCGCCATCTCTTAGGTTTGCTAAAAGTGCAATTAGC GAAAGCAAACGTAGAGATAGTGCTCGATTGCGAGGAAAACATCATCATCGATGGCCCTGCTTGGCAATATCTGCAACTCT TCTATCGCTTAATTACTAACACTTTGAATCATGCTTTTAAGACTCACAACGAACAGCGTGAAATTTCCATCGCCATCGAC AAATCGAACGACGTGCTGCAGATCAGTATTATCGATAATGGAATTGGTATGACGGAGGCGCAGCTCACGCAATTGCGACA GGAACTGGAGCAAGAACTCTGCCTCGGAACCTTAACCTGTATCAATCTGTGGCTCAAAAACGATCTTAATGGCAGCCTGA CCATCAGCAGCCTGTTAAACCAAGGCACACACATACAATGTCATTGGCCGCTTAGTACAAGCTTAGCGTCGCAATAA
Upstream 100 bases:
>100_bases CGCTTATCCCATTCAATCCCTGCAACTTAGACATATGCCAATAGCAAAACAGCGAGAACGCGCTACACTGGCTCAATGAA AAGTGGTGATTTGGAAACTG
Downstream 100 bases:
>100_bases AGAAGTCGGCTTACTGATCAAGCCATGCTTTTGCTTGGGTTTGCTCATCGGCAGCAAATACCTTTACAGGGCACGGCAGC ATGCAGGCAAGCGCATTGAC
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: Sensor Histidine Kinase; PAS/PAC Sensor Protein; Sensory Box Histidine Kinase; Multi-Sensor Signal Transduction Histidine Kinase; Methyl-Accepting Chemotaxis Transducer; Methyl-Accepting Chemotaxis Protein; Methyl-Accepting Chemotaxis Receptor Protein; Methyl-Accepting Chemotaxis Sensory Transducer; Two-Component Hybrid Sensor And Regulator; GGDEF Domain-Containing Protein; Histidine Kinase; Signal-Transducing Histidine Kinase; Fog Ggdef Domain Containing Protein; Two-Component Sensor Histidine Kinase; Methyl-Accepting Chemotaxis Protein I; Sensory Histidine Kinase; Two-Component Histidine Kinase; Sensory Box Protein; Chemotaxis Sensory Transducer; Signal Transduction Histidine Kinase Sensor; PAS Domain-Containing Protein; ATPase Histidine Kinase- DNA Gyrase B- And
Number of amino acids: Translated: 878; Mature: 878
Protein sequence:
>878_residues MIMGKSSTSEPHTALTQWQNSLPFKFSLIQLVIAAILICSTAWVILSIQRQQVLDQQAVLNQNYGQLIIAKLQEMTSQVE TVVGSISSIATLYRYDHEQLVKTIPSLLTLDNQQRIISGGGVWPEPGAFNQQKFRDSLFWAHNVNEELVAIDSYNKDTFP SYHTEEWYRPTRYFPAGKIFWSKSYFDPTTHESMITASGAMWMDHQFIGAATVDISLEKLNALLRNAMVDVRGYVIALDH QNQVLAYPHGNNNLQHQANTSHTFVTFNHLVDQQPDFTPIEAALHNADKAFIEEAVAERVFTQEQMQHLTRLSHQDERDM LAAIVNNNALNHFTTPKLLTSVTLAHDPILKTASLVSVFLMPNTYWKVLVVTPISPLQDTAKHLVEKVGIYLVCIQLLGL ILLFLLQHRLFITPIIEIVQALKRNDSASIELKAKDSHDEIGLLAKTFLSRTQQLEVAMASLDASNLALEQQLQSQNLFQ LELKRHKEQLRALLKFSQNLIYVKDLHGKYILVNDKYCEILGIERRRIIGASDFEVFPSQFAHEYQQNDRRVLHNNEAIN FEEAIPSPLGNLIYIVTKFKIKDDDDTVIAVGAIAFDITLKKIKEQEQDKLLLGQVETLNHLQEQVRLINQHNNELYQEQ EALTKMLEKHHQLNLSREQSQQLMQNFLAEMMTQIMHEQDQLLAKVCQLQQTDEANYRAQITEIMVTQAEKLRHIAQLLT NHQNDIRPLHLAQFMRHLLGLLKVQLAKANVEIVLDCEENIIIDGPAWQYLQLFYRLITNTLNHAFKTHNEQREISIAID KSNDVLQISIIDNGIGMTEAQLTQLRQELEQELCLGTLTCINLWLKNDLNGSLTISSLLNQGTHIQCHWPLSTSLASQ
Sequences:
>Translated_878_residues MIMGKSSTSEPHTALTQWQNSLPFKFSLIQLVIAAILICSTAWVILSIQRQQVLDQQAVLNQNYGQLIIAKLQEMTSQVE TVVGSISSIATLYRYDHEQLVKTIPSLLTLDNQQRIISGGGVWPEPGAFNQQKFRDSLFWAHNVNEELVAIDSYNKDTFP SYHTEEWYRPTRYFPAGKIFWSKSYFDPTTHESMITASGAMWMDHQFIGAATVDISLEKLNALLRNAMVDVRGYVIALDH QNQVLAYPHGNNNLQHQANTSHTFVTFNHLVDQQPDFTPIEAALHNADKAFIEEAVAERVFTQEQMQHLTRLSHQDERDM LAAIVNNNALNHFTTPKLLTSVTLAHDPILKTASLVSVFLMPNTYWKVLVVTPISPLQDTAKHLVEKVGIYLVCIQLLGL ILLFLLQHRLFITPIIEIVQALKRNDSASIELKAKDSHDEIGLLAKTFLSRTQQLEVAMASLDASNLALEQQLQSQNLFQ LELKRHKEQLRALLKFSQNLIYVKDLHGKYILVNDKYCEILGIERRRIIGASDFEVFPSQFAHEYQQNDRRVLHNNEAIN FEEAIPSPLGNLIYIVTKFKIKDDDDTVIAVGAIAFDITLKKIKEQEQDKLLLGQVETLNHLQEQVRLINQHNNELYQEQ EALTKMLEKHHQLNLSREQSQQLMQNFLAEMMTQIMHEQDQLLAKVCQLQQTDEANYRAQITEIMVTQAEKLRHIAQLLT NHQNDIRPLHLAQFMRHLLGLLKVQLAKANVEIVLDCEENIIIDGPAWQYLQLFYRLITNTLNHAFKTHNEQREISIAID KSNDVLQISIIDNGIGMTEAQLTQLRQELEQELCLGTLTCINLWLKNDLNGSLTISSLLNQGTHIQCHWPLSTSLASQ >Mature_878_residues MIMGKSSTSEPHTALTQWQNSLPFKFSLIQLVIAAILICSTAWVILSIQRQQVLDQQAVLNQNYGQLIIAKLQEMTSQVE TVVGSISSIATLYRYDHEQLVKTIPSLLTLDNQQRIISGGGVWPEPGAFNQQKFRDSLFWAHNVNEELVAIDSYNKDTFP SYHTEEWYRPTRYFPAGKIFWSKSYFDPTTHESMITASGAMWMDHQFIGAATVDISLEKLNALLRNAMVDVRGYVIALDH QNQVLAYPHGNNNLQHQANTSHTFVTFNHLVDQQPDFTPIEAALHNADKAFIEEAVAERVFTQEQMQHLTRLSHQDERDM LAAIVNNNALNHFTTPKLLTSVTLAHDPILKTASLVSVFLMPNTYWKVLVVTPISPLQDTAKHLVEKVGIYLVCIQLLGL ILLFLLQHRLFITPIIEIVQALKRNDSASIELKAKDSHDEIGLLAKTFLSRTQQLEVAMASLDASNLALEQQLQSQNLFQ LELKRHKEQLRALLKFSQNLIYVKDLHGKYILVNDKYCEILGIERRRIIGASDFEVFPSQFAHEYQQNDRRVLHNNEAIN FEEAIPSPLGNLIYIVTKFKIKDDDDTVIAVGAIAFDITLKKIKEQEQDKLLLGQVETLNHLQEQVRLINQHNNELYQEQ EALTKMLEKHHQLNLSREQSQQLMQNFLAEMMTQIMHEQDQLLAKVCQLQQTDEANYRAQITEIMVTQAEKLRHIAQLLT NHQNDIRPLHLAQFMRHLLGLLKVQLAKANVEIVLDCEENIIIDGPAWQYLQLFYRLITNTLNHAFKTHNEQREISIAID KSNDVLQISIIDNGIGMTEAQLTQLRQELEQELCLGTLTCINLWLKNDLNGSLTISSLLNQGTHIQCHWPLSTSLASQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100368; Mature: 100368
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMGKSSTSEPHTALTQWQNSLPFKFSLIQLVIAAILICSTAWVILSIQRQQVLDQQAVL CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQNYGQLIIAKLQEMTSQVETVVGSISSIATLYRYDHEQLVKTIPSLLTLDNQQRIISGG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECC GVWPEPGAFNQQKFRDSLFWAHNVNEELVAIDSYNKDTFPSYHTEEWYRPTRYFPAGKIF CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCEEE WSKSYFDPTTHESMITASGAMWMDHQFIGAATVDISLEKLNALLRNAMVDVRGYVIALDH EECCCCCCCCCCHHEEECCCCEECCCCCCEEEEEEEHHHHHHHHHHHHHHCCEEEEEEEC QNQVLAYPHGNNNLQHQANTSHTFVTFNHLVDQQPDFTPIEAALHNADKAFIEEAVAERV CCCEEEECCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHH FTQEQMQHLTRLSHQDERDMLAAIVNNNALNHFTTPKLLTSVTLAHDPILKTASLVSVFL HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHC MPNTYWKVLVVTPISPLQDTAKHLVEKVGIYLVCIQLLGLILLFLLQHRLFITPIIEIVQ CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALKRNDSASIELKAKDSHDEIGLLAKTFLSRTQQLEVAMASLDASNLALEQQLQSQNLFQ HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHH LELKRHKEQLRALLKFSQNLIYVKDLHGKYILVNDKYCEILGIERRRIIGASDFEVFPSQ HHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCEEEEECCCHHHEECCCCHHHHHHH FAHEYQQNDRRVLHNNEAINFEEAIPSPLGNLIYIVTKFKIKDDDDTVIAVGAIAFDITL HHHHHHHCCCCEECCCCCCCHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEEHHHHHHHH KKIKEQEQDKLLLGQVETLNHLQEQVRLINQHNNELYQEQEALTKMLEKHHQLNLSREQS HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHH QQLMQNFLAEMMTQIMHEQDQLLAKVCQLQQTDEANYRAQITEIMVTQAEKLRHIAQLLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NHQNDIRPLHLAQFMRHLLGLLKVQLAKANVEIVLDCEENIIIDGPAWQYLQLFYRLITN CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCCHHHHHHHHHHHHHH TLNHAFKTHNEQREISIAIDKSNDVLQISIIDNGIGMTEAQLTQLRQELEQELCLGTLTC HHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH INLWLKNDLNGSLTISSLLNQGTHIQCHWPLSTSLASQ HHHHHHCCCCCCEEHHHHHCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MIMGKSSTSEPHTALTQWQNSLPFKFSLIQLVIAAILICSTAWVILSIQRQQVLDQQAVL CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQNYGQLIIAKLQEMTSQVETVVGSISSIATLYRYDHEQLVKTIPSLLTLDNQQRIISGG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECC GVWPEPGAFNQQKFRDSLFWAHNVNEELVAIDSYNKDTFPSYHTEEWYRPTRYFPAGKIF CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCEEE WSKSYFDPTTHESMITASGAMWMDHQFIGAATVDISLEKLNALLRNAMVDVRGYVIALDH EECCCCCCCCCCHHEEECCCCEECCCCCCEEEEEEEHHHHHHHHHHHHHHCCEEEEEEEC QNQVLAYPHGNNNLQHQANTSHTFVTFNHLVDQQPDFTPIEAALHNADKAFIEEAVAERV CCCEEEECCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHH FTQEQMQHLTRLSHQDERDMLAAIVNNNALNHFTTPKLLTSVTLAHDPILKTASLVSVFL HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHC MPNTYWKVLVVTPISPLQDTAKHLVEKVGIYLVCIQLLGLILLFLLQHRLFITPIIEIVQ CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALKRNDSASIELKAKDSHDEIGLLAKTFLSRTQQLEVAMASLDASNLALEQQLQSQNLFQ HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHH LELKRHKEQLRALLKFSQNLIYVKDLHGKYILVNDKYCEILGIERRRIIGASDFEVFPSQ HHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCEEEEECCCHHHEECCCCHHHHHHH FAHEYQQNDRRVLHNNEAINFEEAIPSPLGNLIYIVTKFKIKDDDDTVIAVGAIAFDITL HHHHHHHCCCCEECCCCCCCHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEEHHHHHHHH KKIKEQEQDKLLLGQVETLNHLQEQVRLINQHNNELYQEQEALTKMLEKHHQLNLSREQS HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHH QQLMQNFLAEMMTQIMHEQDQLLAKVCQLQQTDEANYRAQITEIMVTQAEKLRHIAQLLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NHQNDIRPLHLAQFMRHLLGLLKVQLAKANVEIVLDCEENIIIDGPAWQYLQLFYRLITN CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCCHHHHHHHHHHHHHH TLNHAFKTHNEQREISIAIDKSNDVLQISIIDNGIGMTEAQLTQLRQELEQELCLGTLTC HHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH INLWLKNDLNGSLTISSLLNQGTHIQCHWPLSTSLASQ HHHHHHCCCCCCEEHHHHHCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA