| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173917
Identifier: 126173917
GI number: 126173917
Start: 1965506
End: 1965967
Strand: Reverse
Name: 126173917
Synonym: Sbal_1686
Alternate gene names: NA
Gene position: 1965967-1965506 (Counterclockwise)
Preceding gene: 126173919
Following gene: 126173912
Centisome position: 38.34
GC content: 49.13
Gene sequence:
>462_bases ATGCCGCTTCGATACCTCAGCCTTGCCATCTTAAGTTGTTTCTCGCTCATCGCCTGTAGCAGTGCCCCCATCGATCCTAG TGAACTTGCCGGAAAATTACGGGATAAGTTAACCACAGACATTAAAGCCGATGGCCTTAAACTCTTCAGCTACACAGCGC GGCTGGTCGATGATAAATCTAACATGGGTGATGCAGACCGCCCTTTCCCGCACGATGCCCGCGTACGTAGCATGCAAGAT CCCCGTGAACAACGTCGCGCGATGCAAGATCTACAGGACTCATTAGAAGTTTGGGGACGACAAGTCGAATTAGGTTTAAC GAAAACCCTTGAAATGACAGGTTATTGCCGCGAAGGTTATATCGAATTGAGTCGGATTATCGAACCCGGGCGAGGCGAAA TTCGTGGTGAATGCCAAGAAGGCGCGACCAATGCCGATAAACAGAAATTTGTGAACTATTAG
Upstream 100 bases:
>100_bases GAGTCACACTCAGTCCATGAAGATGCCATAAATCCATGAACTTTAGGGTCATATTAAGGTATTCTGCTGTCAGTTAATAA CCTAAGAGTTAAATTTGATT
Downstream 100 bases:
>100_bases CGAAGGTTTGAGTAGCTTAAATTTGCATGGCTAAGGTCTGAGCATCGAAAAGACGCAAGATTAGATAAGCACTGTTAATC CGCTAAAAATAGCGAAAATA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MPLRYLSLAILSCFSLIACSSAPIDPSELAGKLRDKLTTDIKADGLKLFSYTARLVDDKSNMGDADRPFPHDARVRSMQD PREQRRAMQDLQDSLEVWGRQVELGLTKTLEMTGYCREGYIELSRIIEPGRGEIRGECQEGATNADKQKFVNY
Sequences:
>Translated_153_residues MPLRYLSLAILSCFSLIACSSAPIDPSELAGKLRDKLTTDIKADGLKLFSYTARLVDDKSNMGDADRPFPHDARVRSMQD PREQRRAMQDLQDSLEVWGRQVELGLTKTLEMTGYCREGYIELSRIIEPGRGEIRGECQEGATNADKQKFVNY >Mature_152_residues PLRYLSLAILSCFSLIACSSAPIDPSELAGKLRDKLTTDIKADGLKLFSYTARLVDDKSNMGDADRPFPHDARVRSMQDP REQRRAMQDLQDSLEVWGRQVELGLTKTLEMTGYCREGYIELSRIIEPGRGEIRGECQEGATNADKQKFVNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17262; Mature: 17131
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRYLSLAILSCFSLIACSSAPIDPSELAGKLRDKLTTDIKADGLKLFSYTARLVDDKS CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC NMGDADRPFPHDARVRSMQDPREQRRAMQDLQDSLEVWGRQVELGLTKTLEMTGYCREGY CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHCCHHHHH IELSRIIEPGRGEIRGECQEGATNADKQKFVNY HHHHHHHCCCCCCCCCCHHCCCCCCHHHHHCCC >Mature Secondary Structure PLRYLSLAILSCFSLIACSSAPIDPSELAGKLRDKLTTDIKADGLKLFSYTARLVDDKS CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC NMGDADRPFPHDARVRSMQDPREQRRAMQDLQDSLEVWGRQVELGLTKTLEMTGYCREGY CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHCCHHHHH IELSRIIEPGRGEIRGECQEGATNADKQKFVNY HHHHHHHCCCCCCCCCCHHCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA