| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yjbA [C]
Identifier: 126173910
GI number: 126173910
Start: 1957364
End: 1957768
Strand: Reverse
Name: yjbA [C]
Synonym: Sbal_1679
Alternate gene names: 126173910
Gene position: 1957768-1957364 (Counterclockwise)
Preceding gene: 126173911
Following gene: 126173909
Centisome position: 38.18
GC content: 42.22
Gene sequence:
>405_bases ATGCCATTTTATCACCGATATGGTTCTAAGAGCCTTAAAGCCGTAGAACACTTAGTCCTGTTTGTTATTGCTATTGCCAC TATCGTCGCGATAGGCCAAGAAATTGTGCATATTGTTTCTGTCCGTATGGTCGCACTAGCCGATTTACTCCTGTTATTCA TTTTCTTAGAAGTCTTAGCCATGGTGGCGAACTACTACGAATCCGGTAAGTTACCCGTGCGTATGCCGCTTTATATCGCG ATTGTAGCCTTGGCTCGTTACCTCATTTTAGATATGAAGAGTATGGAAGATTGGCGTATTGCCGCGATATCACTGTCAAC GTTAATTTTAGCGGCAACTGTGATCGTCATTCGTTGGGGTCAGTTAAAAATGCCCTATCCTAAAAACCAAGAATACGACA ATTAA
Upstream 100 bases:
>100_bases AAACATATCTGTGAATTAAGTCACACAGCGGCGGCTAGCTTTTCCCTATAAGCTGATTTTTACTGTTACTATTTATAAAA ACATCAAGTAGGGAATGCCC
Downstream 100 bases:
>100_bases TCAAGCACCTGAGTTGGTGCTATTGAATGCTTATTCAATAGCACCTGCTGCCCTCGTTTTAAAACTATTATCAAAGACCT AGCTTTCACATTGGTATTCT
Product: phosphate-starvation-inducible E
Products: NA
Alternate protein names: Protein PsiE
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MPFYHRYGSKSLKAVEHLVLFVIAIATIVAIGQEIVHIVSVRMVALADLLLLFIFLEVLAMVANYYESGKLPVRMPLYIA IVALARYLILDMKSMEDWRIAAISLSTLILAATVIVIRWGQLKMPYPKNQEYDN
Sequences:
>Translated_134_residues MPFYHRYGSKSLKAVEHLVLFVIAIATIVAIGQEIVHIVSVRMVALADLLLLFIFLEVLAMVANYYESGKLPVRMPLYIA IVALARYLILDMKSMEDWRIAAISLSTLILAATVIVIRWGQLKMPYPKNQEYDN >Mature_133_residues PFYHRYGSKSLKAVEHLVLFVIAIATIVAIGQEIVHIVSVRMVALADLLLLFIFLEVLAMVANYYESGKLPVRMPLYIAI VALARYLILDMKSMEDWRIAAISLSTLILAATVIVIRWGQLKMPYPKNQEYDN
Specific function: Unknown
COG id: COG3223
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15211; Mature: 15079
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFYHRYGSKSLKAVEHLVLFVIAIATIVAIGQEIVHIVSVRMVALADLLLLFIFLEVLA CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVANYYESGKLPVRMPLYIAIVALARYLILDMKSMEDWRIAAISLSTLILAATVIVIRWG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC QLKMPYPKNQEYDN CCCCCCCCCCCCCC >Mature Secondary Structure PFYHRYGSKSLKAVEHLVLFVIAIATIVAIGQEIVHIVSVRMVALADLLLLFIFLEVLA CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVANYYESGKLPVRMPLYIAIVALARYLILDMKSMEDWRIAAISLSTLILAATVIVIRWG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC QLKMPYPKNQEYDN CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA