Click here to switch to the map view.

The map label for this gene is lpxH [H]

Identifier: 126173833

GI number: 126173833

Start: 1868000

End: 1868722

Strand: Reverse

Name: lpxH [H]

Synonym: Sbal_1599

Alternate gene names: 126173833

Gene position: 1868722-1868000 (Counterclockwise)

Preceding gene: 126173834

Following gene: 126173831

Centisome position: 36.45

GC content: 47.58

Gene sequence:

>723_bases
ATGCGAACTTTATTTATAGGCGATCTGCACCTGAGTGCAGATCGTCTTGATATCACCCAAGCGTTCACTCGCTTCCTCGA
CACTGAACTCGATGATGCCGACGCCCTCTATATCCTAGGTGATTTGTTTGAAGTCTGGGTTGGCGATGATATTGCCTTAC
CTTTTGCCCTCGAACTCGCCGAAAAACTCAAGCAAGTATCACAAAAGCTGCCGGTGTATTTCATCCACGGCAACCGTGAC
TTTATGTTAGGCAAGCAGTATGCGCGCGCCGCAGGAATGCAAATCTTACCCGAAGTGACGTGCCTGAATTTATACGGCAT
AGAGACGGTTATCTTACACGGCGACAGCTTGTGTACTTTAGATAAAGCCTATCAACGCTTTCGAAAACTGCGCAGTTTAT
CGCTGGCGCGTTGGCTATATGGTTGTTTATCCAAGAAAACTCGTCAGGGCATTGCCGATAAAATTCGCAGCAATAGCAAA
AGCAGCAATCAGCAAAAAAGCTACACCATCATGGATGTGGAGCCCAATGCGGTCGATGCGTTATTTGCCAAGACCCACAC
CAAACATATGATCCACGGTCATACCCACAGACCCGCCATTCATCAACTTGCTAATGGCTGTCAACGTATTGTGGTGGGCG
ATTGGTATGAGCAAGGCAGTGTACTGAGTGTGAGCGCCGAAGGGATTAATTTGCAGTCCTTACCCTTCGAGCAAACAACT
TAA

Upstream 100 bases:

>100_bases
AATCAAAGCTGTTAGCACTGGCAACCGTGGTATGCATCAAGATGTGCCATTAGAAGCCATTGTGATTGAAAAAGTCAGCG
TTGCGGCATAATCCCTGCGG

Downstream 100 bases:

>100_bases
ATTAGCTTGCTTTTATTAGCCTTGTTTCAGCTTAAAGAGGCTTCATATTAACGGTTCGAGCGAACCGTTAATCGTTTTAG
CTATATCGACTTAATTCATC

Product: UDP-2,3-diacylglucosamine hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MRTLFIGDLHLSADRLDITQAFTRFLDTELDDADALYILGDLFEVWVGDDIALPFALELAEKLKQVSQKLPVYFIHGNRD
FMLGKQYARAAGMQILPEVTCLNLYGIETVILHGDSLCTLDKAYQRFRKLRSLSLARWLYGCLSKKTRQGIADKIRSNSK
SSNQQKSYTIMDVEPNAVDALFAKTHTKHMIHGHTHRPAIHQLANGCQRIVVGDWYEQGSVLSVSAEGINLQSLPFEQTT

Sequences:

>Translated_240_residues
MRTLFIGDLHLSADRLDITQAFTRFLDTELDDADALYILGDLFEVWVGDDIALPFALELAEKLKQVSQKLPVYFIHGNRD
FMLGKQYARAAGMQILPEVTCLNLYGIETVILHGDSLCTLDKAYQRFRKLRSLSLARWLYGCLSKKTRQGIADKIRSNSK
SSNQQKSYTIMDVEPNAVDALFAKTHTKHMIHGHTHRPAIHQLANGCQRIVVGDWYEQGSVLSVSAEGINLQSLPFEQTT
>Mature_240_residues
MRTLFIGDLHLSADRLDITQAFTRFLDTELDDADALYILGDLFEVWVGDDIALPFALELAEKLKQVSQKLPVYFIHGNRD
FMLGKQYARAAGMQILPEVTCLNLYGIETVILHGDSLCTLDKAYQRFRKLRSLSLARWLYGCLSKKTRQGIADKIRSNSK
SSNQQKSYTIMDVEPNAVDALFAKTHTKHMIHGHTHRPAIHQLANGCQRIVVGDWYEQGSVLSVSAEGINLQSLPFEQTT

Specific function: Catalyzes the hydrolysis of the pyrophosphate bond of UDP-2,3-diacylglucosamine to yield 2,3-diacylglucosamine 1- phosphate (lipid X) and UMP [H]

COG id: COG2908

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lpxH family [H]

Homologues:

Organism=Escherichia coli, GI1786735, Length=240, Percent_Identity=48.3333333333333, Blast_Score=228, Evalue=4e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR010138 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: 3.6.1.-

Molecular weight: Translated: 27099; Mature: 27099

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLFIGDLHLSADRLDITQAFTRFLDTELDDADALYILGDLFEVWVGDDIALPFALELA
CCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
EKLKQVSQKLPVYFIHGNRDFMLGKQYARAAGMQILPEVTCLNLYGIETVILHGDSLCTL
HHHHHHHHHCCEEEEECCCCEEHHHHHHHHCCCHHCCCCEEEEEECCEEEEEECCCEEHH
DKAYQRFRKLRSLSLARWLYGCLSKKTRQGIADKIRSNSKSSNQQKSYTIMDVEPNAVDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHH
LFAKTHTKHMIHGHTHRPAIHQLANGCQRIVVGDWYEQGSVLSVSAEGINLQSLPFEQTT
HHHHHHHHHHHCCCCCCHHHHHHHHHHCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTLFIGDLHLSADRLDITQAFTRFLDTELDDADALYILGDLFEVWVGDDIALPFALELA
CCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
EKLKQVSQKLPVYFIHGNRDFMLGKQYARAAGMQILPEVTCLNLYGIETVILHGDSLCTL
HHHHHHHHHCCEEEEECCCCEEHHHHHHHHCCCHHCCCCEEEEEECCEEEEEECCCEEHH
DKAYQRFRKLRSLSLARWLYGCLSKKTRQGIADKIRSNSKSSNQQKSYTIMDVEPNAVDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHH
LFAKTHTKHMIHGHTHRPAIHQLANGCQRIVVGDWYEQGSVLSVSAEGINLQSLPFEQTT
HHHHHHHHHHHCCCCCCHHHHHHHHHHCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA