| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126173806
Identifier: 126173806
GI number: 126173806
Start: 1830389
End: 1830769
Strand: Reverse
Name: 126173806
Synonym: Sbal_1572
Alternate gene names: NA
Gene position: 1830769-1830389 (Counterclockwise)
Preceding gene: 126173807
Following gene: 126173804
Centisome position: 35.71
GC content: 40.16
Gene sequence:
>381_bases ATGTACTTCATTGCTGCTTTTGGTTTACTGATGTTGTTATTAAGTCTAGTGATGGCTGTAAAGCCTGAGTCTTTCTCTAA GGGGATTATTTCATTTAGCGAGCAGCCCTACTTCCATATTGCTGAGGTGACCAGCCGAATTATTGCGGGTCTCATTTTTA CCCATTACTCAACCGATACTCAGTTTCCACAGACCATTTTTGCGATAGGTATTGTGTTGTTCTGTGTCGGAATGGGCTTA GCATTAACGCATCCAAGGTTACATAGAAAGTTTGCGCTATGGTCTGCTCAATACTTCAACAATAAATTCCGTTTAATTGG TCTATTTTCGATCCCGCTATTTTGCTACTTATCTATTCTGCTGTTGGCGCCTAAAAAATAG
Upstream 100 bases:
>100_bases GTGACACAGCAGAAGATCTGGCAATGTTACAACTTGCACACGAAAAATATATGAACTGGAATGAAGTCACTTACTAGAAA AATAATACCAAGGGATCACT
Downstream 100 bases:
>100_bases TATGCAATCCAACAACAAGGATTTTGTCACAATAATTTAGTTTTAGCTAAAGCATCGCCACTTGTAAAAAACAATGCTAA GGTAATGATTCGTATAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MYFIAAFGLLMLLLSLVMAVKPESFSKGIISFSEQPYFHIAEVTSRIIAGLIFTHYSTDTQFPQTIFAIGIVLFCVGMGL ALTHPRLHRKFALWSAQYFNNKFRLIGLFSIPLFCYLSILLLAPKK
Sequences:
>Translated_126_residues MYFIAAFGLLMLLLSLVMAVKPESFSKGIISFSEQPYFHIAEVTSRIIAGLIFTHYSTDTQFPQTIFAIGIVLFCVGMGL ALTHPRLHRKFALWSAQYFNNKFRLIGLFSIPLFCYLSILLLAPKK >Mature_126_residues MYFIAAFGLLMLLLSLVMAVKPESFSKGIISFSEQPYFHIAEVTSRIIAGLIFTHYSTDTQFPQTIFAIGIVLFCVGMGL ALTHPRLHRKFALWSAQYFNNKFRLIGLFSIPLFCYLSILLLAPKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14284; Mature: 14284
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFIAAFGLLMLLLSLVMAVKPESFSKGIISFSEQPYFHIAEVTSRIIAGLIFTHYSTDT CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC QFPQTIFAIGIVLFCVGMGLALTHPRLHRKFALWSAQYFNNKFRLIGLFSIPLFCYLSIL CCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHH LLAPKK HHCCCC >Mature Secondary Structure MYFIAAFGLLMLLLSLVMAVKPESFSKGIISFSEQPYFHIAEVTSRIIAGLIFTHYSTDT CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC QFPQTIFAIGIVLFCVGMGLALTHPRLHRKFALWSAQYFNNKFRLIGLFSIPLFCYLSIL CCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHH LLAPKK HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA