Definition | Shewanella baltica OS155 chromosome, complete genome. |
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Accession | NC_009052 |
Length | 5,127,376 |
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The map label for this gene is 126173778
Identifier: 126173778
GI number: 126173778
Start: 1796398
End: 1796793
Strand: Reverse
Name: 126173778
Synonym: Sbal_1544
Alternate gene names: NA
Gene position: 1796793-1796398 (Counterclockwise)
Preceding gene: 126173782
Following gene: 126173777
Centisome position: 35.04
GC content: 47.98
Gene sequence:
>396_bases ATGCGCGTAACCCGCTTAGATCATTTGGTCTTAACCGTAAAAGACATCGCCGTCAGCGTCGAATTTTATCAAACCGTGCT CGGGATGAAGAAAGTGGTATTTGGCAATCAGCGTATTGCGTTAAGTTTTGGCGACCAAAAGATTAATCTGCACCAAGCGG GCGCCGAATTTGAACCTAAAGCTGCAGCAGCCACGCCCGGCAGTGCCGATCTATGTTTTGTAGTCAGCCATAACATAGAA GAAGTGATCGCGCATTTAAACGCTCTTCAGATTAAAATCATTGAAGGACCAGTGCTACGAACCGGCGCCACAGGCCGGAT AAACTCTGTCTATATCCGCGACCCCGATTGTAACCTGCTTGAGTTATCAGAATATTTGCCCGCCTGCACTGGGTAA
Upstream 100 bases:
>100_bases CACCAGCACATGATGTAAGGTATCTGACTCTTATTCGTCTCAAGCATAGAGATAGCGTTCAAAATCAGAGCCCACTCTGA GCCATTCTAAGGAAAGTAAA
Downstream 100 bases:
>100_bases GCGAAGTTAAAAACTTCATTTGAATTTTTTAATCAAAGTCAAAGTCGTGGGGCTTCACCCCACACCCGACCAAGGAGGAC TGCTCGTCCTATCAAAAACG
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MRVTRLDHLVLTVKDIAVSVEFYQTVLGMKKVVFGNQRIALSFGDQKINLHQAGAEFEPKAAAATPGSADLCFVVSHNIE EVIAHLNALQIKIIEGPVLRTGATGRINSVYIRDPDCNLLELSEYLPACTG
Sequences:
>Translated_131_residues MRVTRLDHLVLTVKDIAVSVEFYQTVLGMKKVVFGNQRIALSFGDQKINLHQAGAEFEPKAAAATPGSADLCFVVSHNIE EVIAHLNALQIKIIEGPVLRTGATGRINSVYIRDPDCNLLELSEYLPACTG >Mature_131_residues MRVTRLDHLVLTVKDIAVSVEFYQTVLGMKKVVFGNQRIALSFGDQKINLHQAGAEFEPKAAAATPGSADLCFVVSHNIE EVIAHLNALQIKIIEGPVLRTGATGRINSVYIRDPDCNLLELSEYLPACTG
Specific function: Is critically involved in promoting the replication of S.typhimurium cells inside host macrophages, suggesting a role in the establishment of bacterial colonization within macrophages. May be involved in the biosynthesis and modification of the peptidogly
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI254039722, Length=124, Percent_Identity=54.0322580645161, Blast_Score=145, Evalue=7e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 14277; Mature: 14277
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTRLDHLVLTVKDIAVSVEFYQTVLGMKKVVFGNQRIALSFGDQKINLHQAGAEFEPK CCCCCHHHEEEEEEHHEEHHHHHHHHHHHHHHEECCCEEEEEECCCEEEEEECCCCCCCC AAAATPGSADLCFVVSHNIEEVIAHLNALQIKIIEGPVLRTGATGRINSVYIRDPDCNLL CCCCCCCCCCEEEEEECCHHHHHHHCCEEEEEEECCCEEECCCCCCCEEEEEECCCCCEE ELSEYLPACTG EHHHHCCCCCC >Mature Secondary Structure MRVTRLDHLVLTVKDIAVSVEFYQTVLGMKKVVFGNQRIALSFGDQKINLHQAGAEFEPK CCCCCHHHEEEEEEHHEEHHHHHHHHHHHHHHEECCCEEEEEECCCEEEEEECCCCCCCC AAAATPGSADLCFVVSHNIEEVIAHLNALQIKIIEGPVLRTGATGRINSVYIRDPDCNLL CCCCCCCCCCEEEEEECCHHHHHHHCCEEEEEEECCCEEECCCCCCCEEEEEECCCCCEE ELSEYLPACTG EHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]