| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173662
Identifier: 126173662
GI number: 126173662
Start: 1646577
End: 1648754
Strand: Reverse
Name: 126173662
Synonym: Sbal_1424
Alternate gene names: NA
Gene position: 1648754-1646577 (Counterclockwise)
Preceding gene: 126173663
Following gene: 126173661
Centisome position: 32.16
GC content: 50.32
Gene sequence:
>2178_bases GTGTTGCTTGGCGATGCCGTCAACCTTGACTCTCACTCAGCACAAATATTAGGGACGTTTGCGGAACGTGAAAGAGTTCA AATTTGCGCTGCCGATGCCAACCAATCGACAGCACATGAACCGACATTGCACGAGTCGAAAATGCATGAACCGTCAGTGC ATGAACCGTCAGTGCATGAGCAAAGGTCGCTCACTGCGTTGTTAGGCCAAGCAACAACAGCCATTGAACAAGGCAAGCTC GTTGAACTGACATTCAATGATGGCAATCTGCCCCAGTCTCTGTATTTGCTCGATGGTTTACGCGCTGCCAAACTGCGCCT TCACGCACACGCATTTATTGCTGGCTTTGCCGCTGGCAATGAAACAACAGATGTTGAAAATGCGGCGACTGTTGCTAATG CGGCCTTAGCGGCGGCAAAGCGCAGCCCAGCTCAAACCGTTCAACATCAGACTGTCGCCAACACTCTTAACGAGACATTT GTTGCGCTGCGCCAAGGTGTAACCGCACTCGCCGCGCGAACACAAGCGCCGCTTAAAGGCACTACTGGTATAAAACAGAC AAACGACACCAATCATCAAACTGGCTATTGGTTTAGCGACCAACATCAAGCGCGGGTATTGTGTCTAAATCTTGTAGCAA AGACGTCACATCAAGCGGATGAGTCTCGAAATCTAAGCCAAAGCCTAGTGCTGACCCAAGGCACACAACTTGCCGCGCCC AAAGCTCTTGTCGATGAAAACAGGCTGTTTGTGCCGATAAGTGGTGACAGTATTAATAAGCTAAAAGCAAAACTGTTTCA GTTGCTTAGTTCACTAGACATTGGCGCACTAGACACGTCATTTGCATCACATCAACTCGCATTCTTGTTTGAACGCTACA ATGCCAACGCACCACTAGCATTAGTCTTAATGGCGGCATCGATTGATGATCTCAAACTTGAAGCTAAGGCCATGCTTACG GCGCTTGAAAATGATGCGGTGCGTCATCATGGTCAGCACTTTAAGACACCAGCGGGCAGCTGCTTTACCGCTAAGCCGCT AGGGGATACGGGACTGACCTTTGTATATCCTGGTGTTGGTACGGTTTACGCCAATATGTTCAACAACTTGCATGAGTACT TCCCCGCGCTGTATCACCAGCTAGAACGTGAAGGCGATTTAAGCGCCATGCTGCAATCACCGCAGATTTATGCGGCAGAT GTTAAAACCGCAGCTGGCATGAACCTAAGTCAGCAAGCGATTAGTGGTGTAGGGGCCAGTTATCTATTCACTAAACTGTT GACCCAAGTCTTTAATATTAAGCCTAAAATGGCGCTCGGTTACTCAATGGGCGAAGCAGCCATGTGGGCCAGCCTAGATG TGTGGCAAACACCGCACGCTATGATCAACGCCACTGAAAATAGCGATATTTTCAACCATGCGATTTCTGGTGAGCTAACC GCAGTCCGCCGAGCGTGGCAGCTTGCGGATGATGAAGCCATAGTGTGGAACAGCTTTGTGGTGCGCGCTGATAGCCATGA AATCAAGGCATTATTGCCAGAGTTTCCTCGTGCTTATTTAGCCATCACTCAAGGTGATACTTGCGTCATTGCAGGCTGCG AAACAAGCTGTAAAGCCCTGCTTACCAAGTTAGGTAAGCGAGGGATTGCTGCCAATCGCGTCACGGCAATGCATACCGCG CCTGCCATGCTAGTCCACGGACAAGTACAAGATTTCTATACTCAAGCGCTAAAACCCGAGGCGCTGAAAGCGGCAGCGCA AGATTCGTCTATTCGCTTTATTAGCGCAGCGCAAACTGCGCCAGTAATCGTGGATAGCCACTGCATTGGCCGCGCGATTG CCGATACCTTTTGTTCGCCACTCGACTTTAGTGCGCTCATTCAAAATGCCACTGAGCAAGGCGCAAGGCTATTTGTCGAA GTGGGCGCCGATAGGCAAACCAGCACACTCATAGATAAAATCAGCCACGCCCATGCAAGCCAAAGCACTGCGAACGCGGC GACAGCCGCCATTGCTTGCAATGCCAAAGGTGCCGATGCTACCACCAGCTTACTCAAGTGTTTAGCTCAGCTGATAAGCC ACAGAGTACCGCTGTCGCTCGCGCCGCTCATTCAGCCACTAAGTGCTAACGCAGCCCCTTTATCATCAGCAGTATTACCA GAAGGAGAACCCCAGTGA
Upstream 100 bases:
>100_bases CTTAGCCCCCCCTTTAGCAACGACCCATAGCGGCCCAGCTGAAACATCGATAGCTGACAAGGCTATTGCTGACAAAAGCG CCAAGCCACTGCGTATTGCA
Downstream 100 bases:
>100_bases GTTCTCAGCATTCCCCTACTATTGATAAAACTACCGTGCCTACCATTGCGTCAAACCGCGCATCAAAAATTGCGATTGTC GGTCTCGCGACTCAGTATCC
Product: PfaB family protein
Products: NA
Alternate protein names: PfaB Family Protein; Beta-Ketoacyl Synthase; Polyunsaturated Fatty Acid Synthase PfaB; Polyketide Synthase; Beta-Ketoacyl Synthase HglC; LOW QUALITY PROTEIN Polyketide Synthase; LOW QUALITY PROTEIN Beta-Ketoacyl Synthase; Heterocyst Glycolipid Synthase; Glycolipid Synthase; Short-Chain Dehydrogenase/Reductase; Multi-Domain Beta-Ketoacyl Polyketide Synthase; Beta Keto-Acyl Synthase; Polyketide Synthase Modules And Related Proteins-Like
Number of amino acids: Translated: 725; Mature: 725
Protein sequence:
>725_residues MLLGDAVNLDSHSAQILGTFAERERVQICAADANQSTAHEPTLHESKMHEPSVHEPSVHEQRSLTALLGQATTAIEQGKL VELTFNDGNLPQSLYLLDGLRAAKLRLHAHAFIAGFAAGNETTDVENAATVANAALAAAKRSPAQTVQHQTVANTLNETF VALRQGVTALAARTQAPLKGTTGIKQTNDTNHQTGYWFSDQHQARVLCLNLVAKTSHQADESRNLSQSLVLTQGTQLAAP KALVDENRLFVPISGDSINKLKAKLFQLLSSLDIGALDTSFASHQLAFLFERYNANAPLALVLMAASIDDLKLEAKAMLT ALENDAVRHHGQHFKTPAGSCFTAKPLGDTGLTFVYPGVGTVYANMFNNLHEYFPALYHQLEREGDLSAMLQSPQIYAAD VKTAAGMNLSQQAISGVGASYLFTKLLTQVFNIKPKMALGYSMGEAAMWASLDVWQTPHAMINATENSDIFNHAISGELT AVRRAWQLADDEAIVWNSFVVRADSHEIKALLPEFPRAYLAITQGDTCVIAGCETSCKALLTKLGKRGIAANRVTAMHTA PAMLVHGQVQDFYTQALKPEALKAAAQDSSIRFISAAQTAPVIVDSHCIGRAIADTFCSPLDFSALIQNATEQGARLFVE VGADRQTSTLIDKISHAHASQSTANAATAAIACNAKGADATTSLLKCLAQLISHRVPLSLAPLIQPLSANAAPLSSAVLP EGEPQ
Sequences:
>Translated_725_residues MLLGDAVNLDSHSAQILGTFAERERVQICAADANQSTAHEPTLHESKMHEPSVHEPSVHEQRSLTALLGQATTAIEQGKL VELTFNDGNLPQSLYLLDGLRAAKLRLHAHAFIAGFAAGNETTDVENAATVANAALAAAKRSPAQTVQHQTVANTLNETF VALRQGVTALAARTQAPLKGTTGIKQTNDTNHQTGYWFSDQHQARVLCLNLVAKTSHQADESRNLSQSLVLTQGTQLAAP KALVDENRLFVPISGDSINKLKAKLFQLLSSLDIGALDTSFASHQLAFLFERYNANAPLALVLMAASIDDLKLEAKAMLT ALENDAVRHHGQHFKTPAGSCFTAKPLGDTGLTFVYPGVGTVYANMFNNLHEYFPALYHQLEREGDLSAMLQSPQIYAAD VKTAAGMNLSQQAISGVGASYLFTKLLTQVFNIKPKMALGYSMGEAAMWASLDVWQTPHAMINATENSDIFNHAISGELT AVRRAWQLADDEAIVWNSFVVRADSHEIKALLPEFPRAYLAITQGDTCVIAGCETSCKALLTKLGKRGIAANRVTAMHTA PAMLVHGQVQDFYTQALKPEALKAAAQDSSIRFISAAQTAPVIVDSHCIGRAIADTFCSPLDFSALIQNATEQGARLFVE VGADRQTSTLIDKISHAHASQSTANAATAAIACNAKGADATTSLLKCLAQLISHRVPLSLAPLIQPLSANAAPLSSAVLP EGEPQ >Mature_725_residues MLLGDAVNLDSHSAQILGTFAERERVQICAADANQSTAHEPTLHESKMHEPSVHEPSVHEQRSLTALLGQATTAIEQGKL VELTFNDGNLPQSLYLLDGLRAAKLRLHAHAFIAGFAAGNETTDVENAATVANAALAAAKRSPAQTVQHQTVANTLNETF VALRQGVTALAARTQAPLKGTTGIKQTNDTNHQTGYWFSDQHQARVLCLNLVAKTSHQADESRNLSQSLVLTQGTQLAAP KALVDENRLFVPISGDSINKLKAKLFQLLSSLDIGALDTSFASHQLAFLFERYNANAPLALVLMAASIDDLKLEAKAMLT ALENDAVRHHGQHFKTPAGSCFTAKPLGDTGLTFVYPGVGTVYANMFNNLHEYFPALYHQLEREGDLSAMLQSPQIYAAD VKTAAGMNLSQQAISGVGASYLFTKLLTQVFNIKPKMALGYSMGEAAMWASLDVWQTPHAMINATENSDIFNHAISGELT AVRRAWQLADDEAIVWNSFVVRADSHEIKALLPEFPRAYLAITQGDTCVIAGCETSCKALLTKLGKRGIAANRVTAMHTA PAMLVHGQVQDFYTQALKPEALKAAAQDSSIRFISAAQTAPVIVDSHCIGRAIADTFCSPLDFSALIQNATEQGARLFVE VGADRQTSTLIDKISHAHASQSTANAATAAIACNAKGADATTSLLKCLAQLISHRVPLSLAPLIQPLSANAAPLSSAVLP EGEPQ
Specific function: Unknown
COG id: COG3321
COG function: function code Q; Polyketide synthase modules and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77540; Mature: 77540
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLGDAVNLDSHSAQILGTFAERERVQICAADANQSTAHEPTLHESKMHEPSVHEPSVHE CCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCHH QRSLTALLGQATTAIEQGKLVELTFNDGNLPQSLYLLDGLRAAKLRLHAHAFIAGFAAGN HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHEEEECCC ETTDVENAATVANAALAAAKRSPAQTVQHQTVANTLNETFVALRQGVTALAARTQAPLKG CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TTGIKQTNDTNHQTGYWFSDQHQARVLCLNLVAKTSHQADESRNLSQSLVLTQGTQLAAP CCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCHHHCCCHHHHEEECCCCCCCC KALVDENRLFVPISGDSINKLKAKLFQLLSSLDIGALDTSFASHQLAFLFERYNANAPLA HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCE LVLMAASIDDLKLEAKAMLTALENDAVRHHGQHFKTPAGSCFTAKPLGDTGLTFVYPGVG EEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEECCHH TVYANMFNNLHEYFPALYHQLEREGDLSAMLQSPQIYAADVKTAAGMNLSQQAISGVGAS HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCHHHCCCCHHHHHHHCCCHH YLFTKLLTQVFNIKPKMALGYSMGEAAMWASLDVWQTPHAMINATENSDIFNHAISGELT HHHHHHHHHHHCCCCCCEECCCCCCHHHHEECHHHCCCHHEEECCCCCHHHHHHHCCHHH AVRRAWQLADDEAIVWNSFVVRADSHEIKALLPEFPRAYLAITQGDTCVIAGCETSCKAL HHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHCCCEEEEEECCCEEEEECCCHHHHHH LTKLGKRGIAANRVTAMHTAPAMLVHGQVQDFYTQALKPEALKAAAQDSSIRFISAAQTA HHHHHCCCCCCCCEEEHHCCCHHEEECHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCC PVIVDSHCIGRAIADTFCSPLDFSALIQNATEQGARLFVEVGADRQTSTLIDKISHAHAS CEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCC QSTANAATAAIACNAKGADATTSLLKCLAQLISHRVPLSLAPLIQPLSANAAPLSSAVLP CCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCC EGEPQ CCCCC >Mature Secondary Structure MLLGDAVNLDSHSAQILGTFAERERVQICAADANQSTAHEPTLHESKMHEPSVHEPSVHE CCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCHH QRSLTALLGQATTAIEQGKLVELTFNDGNLPQSLYLLDGLRAAKLRLHAHAFIAGFAAGN HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHEEEECCC ETTDVENAATVANAALAAAKRSPAQTVQHQTVANTLNETFVALRQGVTALAARTQAPLKG CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TTGIKQTNDTNHQTGYWFSDQHQARVLCLNLVAKTSHQADESRNLSQSLVLTQGTQLAAP CCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCHHHCCCHHHHEEECCCCCCCC KALVDENRLFVPISGDSINKLKAKLFQLLSSLDIGALDTSFASHQLAFLFERYNANAPLA HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCE LVLMAASIDDLKLEAKAMLTALENDAVRHHGQHFKTPAGSCFTAKPLGDTGLTFVYPGVG EEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEECCHH TVYANMFNNLHEYFPALYHQLEREGDLSAMLQSPQIYAADVKTAAGMNLSQQAISGVGAS HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCHHHCCCCHHHHHHHCCCHH YLFTKLLTQVFNIKPKMALGYSMGEAAMWASLDVWQTPHAMINATENSDIFNHAISGELT HHHHHHHHHHHCCCCCCEECCCCCCHHHHEECHHHCCCHHEEECCCCCHHHHHHHCCHHH AVRRAWQLADDEAIVWNSFVVRADSHEIKALLPEFPRAYLAITQGDTCVIAGCETSCKAL HHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHCCCEEEEEECCCEEEEECCCHHHHHH LTKLGKRGIAANRVTAMHTAPAMLVHGQVQDFYTQALKPEALKAAAQDSSIRFISAAQTA HHHHHCCCCCCCCEEEHHCCCHHEEECHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCC PVIVDSHCIGRAIADTFCSPLDFSALIQNATEQGARLFVEVGADRQTSTLIDKISHAHAS CEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCC QSTANAATAAIACNAKGADATTSLLKCLAQLISHRVPLSLAPLIQPLSANAAPLSSAVLP CCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCC EGEPQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA