| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
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The map label for this gene is tagH [H]
Identifier: 125624423
GI number: 125624423
Start: 1599003
End: 1600433
Strand: Reverse
Name: tagH [H]
Synonym: llmg_1623
Alternate gene names: 125624423
Gene position: 1600433-1599003 (Counterclockwise)
Preceding gene: 125624424
Following gene: 125624422
Centisome position: 63.27
GC content: 36.62
Gene sequence:
>1431_bases ATGACAAATAATAACAATAAAAAACTTAAGGTAAAAGCGACCAATTTAACAAAAAGATTTGAAATGCTTGAGACAACAAG CAATAAGATGAAGACTTTATTTGGTCTAAATCGAGACAAAGGACAGGAATTTTGGGCACTGAGAAATGTAAGTTTTGAAG TTCATGATGGTGAAACAATTGGAATCATAGGGCTAAATGGTTCTGGAAAATCTACGATATCAACGCTCATCAGTGGCACA ATGACTCCGACAACAGGAGCACTGGAGGTTAATGGGGATGTAAGTATTATTGCCTTAGGAACTGGTCTCATTCCAAATCT TACAGGTCGCGAAAATATTCATGTTGTTGGTCTCATGATGGGAATGACCAATAAAGAAATAGAAAATAAGCTTGATGACA TTATTAACTTTTCAGAACTCGGACCATTTATTGACCAACCATTAAAAACCTACTCATCAGGAATGAAAGCCAAATTAAGC TTTTCAATTGCCGCTTATCAAGACCCAGATATTTTGATTATTGATGAAGTCCTCTCCGTTGGAGATGGAACGTTTGGACA AAAATCAGCAGATAAAATGTTTGAGTTTCGCGAACAAGGTAAAACGATTTTACTTATTTCTCATGACATGCTGGCCATTG AAAAGTGGTGTGATAAAGTACTCTGGCTGCATTATGGTGAAGTTAAAGGCTATGGTTCTACAGAAGAAATATTGCCTCAA TATATTAATTTCGTTCAGTGGTTTATTCGGCTTACCCCAGAGGAACAAGATGAGTATAAAGAAAAAGTAAGAAGAGAGCA ACTGACTTATTCTGTTGAAATCCTCAAAGATGAACTTGAAGAAGAATATGGGCAAAAAAATTCTCGTTCCAACAGAGAAG AAGTTAAAGAACAGCTTGACTTCTCCAAAAATAATAAACTTTCTGTCTTCATCAAAATGCTTCTCGTCGTTCTTGCCTTA GTTTTCCTCGCTGGTGGCATATTTTATACAAGTAATACATCAGATGTTGCCGCTCTTGCTAATCCCATAAATTTTTTTCA ACAACATGCTTTTAGAGAAAAGACAGAATTCTCGGAGAAAATTAGTAATGAGGTAAGGAGTCTGAGCGAAAGTGAAGCAA GAAAAAATAGGAATAAAGAAAAGTTACAGTTAAAATCGATAACTGAGAATCAGACGACCACTACAAAAAGTTCCAAAGCC TCAAAAAAAAGCTCAAGTTTAAAAGAAAGTTCACAATCCTCGCCCTCATCTACAGAGGCAACAACAAACTATACTATTCA AGCGGGTGATTCTTTAAGTGTAATTGCTGATAATTTAGGAACAACTGTATCCGAAATTCAAACGTTGAATCCTGGGTTAG ATGCAGCTGCCCTTCAGCCTGGTGCAGTGATTAAGGTACCGGAAACGACAACGACAACTCAAGGGCATTAG
Upstream 100 bases:
>100_bases ATAATCGGTCAGTAAATGACTATATTGTTTTGAAATGAGAAAACTCATTAGCAGCTGAGTTGCTAAATGATAGATATATT AGAACGGAAAATTAGTTCAA
Downstream 100 bases:
>100_bases AAAGAAGAAGATGAAAGACTTAGTTCAATATTTAAAAGAACAAATAGAAAATTTACCACTGATTTATAATGTATCCAAGT ATCATACGAAAAGTACACAG
Product: teichoic acid export ATP-binding protein tagH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MTNNNNKKLKVKATNLTKRFEMLETTSNKMKTLFGLNRDKGQEFWALRNVSFEVHDGETIGIIGLNGSGKSTISTLISGT MTPTTGALEVNGDVSIIALGTGLIPNLTGRENIHVVGLMMGMTNKEIENKLDDIINFSELGPFIDQPLKTYSSGMKAKLS FSIAAYQDPDILIIDEVLSVGDGTFGQKSADKMFEFREQGKTILLISHDMLAIEKWCDKVLWLHYGEVKGYGSTEEILPQ YINFVQWFIRLTPEEQDEYKEKVRREQLTYSVEILKDELEEEYGQKNSRSNREEVKEQLDFSKNNKLSVFIKMLLVVLAL VFLAGGIFYTSNTSDVAALANPINFFQQHAFREKTEFSEKISNEVRSLSESEARKNRNKEKLQLKSITENQTTTTKSSKA SKKSSSLKESSQSSPSSTEATTNYTIQAGDSLSVIADNLGTTVSEIQTLNPGLDAAALQPGAVIKVPETTTTTQGH
Sequences:
>Translated_476_residues MTNNNNKKLKVKATNLTKRFEMLETTSNKMKTLFGLNRDKGQEFWALRNVSFEVHDGETIGIIGLNGSGKSTISTLISGT MTPTTGALEVNGDVSIIALGTGLIPNLTGRENIHVVGLMMGMTNKEIENKLDDIINFSELGPFIDQPLKTYSSGMKAKLS FSIAAYQDPDILIIDEVLSVGDGTFGQKSADKMFEFREQGKTILLISHDMLAIEKWCDKVLWLHYGEVKGYGSTEEILPQ YINFVQWFIRLTPEEQDEYKEKVRREQLTYSVEILKDELEEEYGQKNSRSNREEVKEQLDFSKNNKLSVFIKMLLVVLAL VFLAGGIFYTSNTSDVAALANPINFFQQHAFREKTEFSEKISNEVRSLSESEARKNRNKEKLQLKSITENQTTTTKSSKA SKKSSSLKESSQSSPSSTEATTNYTIQAGDSLSVIADNLGTTVSEIQTLNPGLDAAALQPGAVIKVPETTTTTQGH >Mature_475_residues TNNNNKKLKVKATNLTKRFEMLETTSNKMKTLFGLNRDKGQEFWALRNVSFEVHDGETIGIIGLNGSGKSTISTLISGTM TPTTGALEVNGDVSIIALGTGLIPNLTGRENIHVVGLMMGMTNKEIENKLDDIINFSELGPFIDQPLKTYSSGMKAKLSF SIAAYQDPDILIIDEVLSVGDGTFGQKSADKMFEFREQGKTILLISHDMLAIEKWCDKVLWLHYGEVKGYGSTEEILPQY INFVQWFIRLTPEEQDEYKEKVRREQLTYSVEILKDELEEEYGQKNSRSNREEVKEQLDFSKNNKLSVFIKMLLVVLALV FLAGGIFYTSNTSDVAALANPINFFQQHAFREKTEFSEKISNEVRSLSESEARKNRNKEKLQLKSITENQTTTTKSSKAS KKSSSLKESSQSSPSSTEATTNYTIQAGDSLSVIADNLGTTVSEIQTLNPGLDAAALQPGAVIKVPETTTTTQGH
Specific function: Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system [H]
COG id: COG1134
COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 LysM repeat [H]
Homologues:
Organism=Homo sapiens, GI6005701, Length=246, Percent_Identity=28.8617886178862, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI27477115, Length=202, Percent_Identity=31.6831683168317, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI116734710, Length=246, Percent_Identity=27.2357723577236, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI27436953, Length=200, Percent_Identity=28.5, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI153792144, Length=208, Percent_Identity=28.3653846153846, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI31657092, Length=216, Percent_Identity=29.6296296296296, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI27262624, Length=305, Percent_Identity=24.9180327868852, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI27262626, Length=305, Percent_Identity=24.9180327868852, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI30795238, Length=206, Percent_Identity=27.1844660194175, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI150417984, Length=210, Percent_Identity=23.8095238095238, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI105990541, Length=204, Percent_Identity=26.9607843137255, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI27881501, Length=206, Percent_Identity=27.1844660194175, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI45446740, Length=239, Percent_Identity=25.5230125523013, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI47078218, Length=239, Percent_Identity=25.5230125523013, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI89111135, Length=208, Percent_Identity=26.9230769230769, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI21536376, Length=204, Percent_Identity=24.5098039215686, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI48994943, Length=251, Percent_Identity=28.6852589641434, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1786398, Length=257, Percent_Identity=26.8482490272374, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1786703, Length=206, Percent_Identity=28.1553398058252, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1787547, Length=217, Percent_Identity=27.6497695852535, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1789032, Length=225, Percent_Identity=25.3333333333333, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI87081709, Length=204, Percent_Identity=24.0196078431373, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788210, Length=197, Percent_Identity=29.9492385786802, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789751, Length=201, Percent_Identity=23.8805970149254, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1790467, Length=217, Percent_Identity=24.8847926267281, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI87081782, Length=236, Percent_Identity=24.5762711864407, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI87081834, Length=204, Percent_Identity=26.4705882352941, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1789672, Length=234, Percent_Identity=23.9316239316239, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI48994883, Length=225, Percent_Identity=24.8888888888889, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787370, Length=210, Percent_Identity=24.2857142857143, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1790739, Length=212, Percent_Identity=25, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17565586, Length=245, Percent_Identity=27.7551020408163, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17510237, Length=218, Percent_Identity=29.3577981651376, Blast_Score=85, Evalue=7e-17, Organism=Caenorhabditis elegans, GI115533608, Length=237, Percent_Identity=24.4725738396624, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71983523, Length=209, Percent_Identity=26.7942583732057, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71983516, Length=209, Percent_Identity=26.7942583732057, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71983510, Length=209, Percent_Identity=26.7942583732057, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17569081, Length=207, Percent_Identity=27.0531400966184, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI25146777, Length=233, Percent_Identity=27.0386266094421, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17556528, Length=216, Percent_Identity=26.3888888888889, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6321720, Length=274, Percent_Identity=28.4671532846715, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24643674, Length=236, Percent_Identity=28.8135593220339, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI116007184, Length=198, Percent_Identity=29.2929292929293, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI221500365, Length=198, Percent_Identity=29.2929292929293, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI221512771, Length=206, Percent_Identity=26.2135922330097, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI28573573, Length=235, Percent_Identity=24.6808510638298, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI28573571, Length=235, Percent_Identity=24.6808510638298, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI45550390, Length=199, Percent_Identity=27.6381909547739, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI24648279, Length=217, Percent_Identity=26.7281105990783, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI161078426, Length=221, Percent_Identity=27.1493212669683, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24666092, Length=215, Percent_Identity=23.7209302325581, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI62484234, Length=312, Percent_Identity=23.3974358974359, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI161077321, Length=202, Percent_Identity=28.7128712871287, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI28574259, Length=208, Percent_Identity=25.9615384615385, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24648314, Length=236, Percent_Identity=24.1525423728814, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI17136662, Length=281, Percent_Identity=25.6227758007117, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015860 - InterPro: IPR003593 - InterPro: IPR018392 - InterPro: IPR002482 [H]
Pfam domain/function: PF00005 ABC_tran; PF01476 LysM [H]
EC number: =3.6.3.40 [H]
Molecular weight: Translated: 52925; Mature: 52793
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNNNNKKLKVKATNLTKRFEMLETTSNKMKTLFGLNRDKGQEFWALRNVSFEVHDGETI CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCEE GIIGLNGSGKSTISTLISGTMTPTTGALEVNGDVSIIALGTGLIPNLTGRENIHVVGLMM EEEEECCCCHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEEE GMTNKEIENKLDDIINFSELGPFIDQPLKTYSSGMKAKLSFSIAAYQDPDILIIDEVLSV CCCCHHHHHHHHHHHCHHHHCHHHHHHHHHHHCCCEEEEEEEEEEECCCCEEEEHHHHHC GDGTFGQKSADKMFEFREQGKTILLISHDMLAIEKWCDKVLWLHYGEVKGYGSTEEILPQ CCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHH YINFVQWFIRLTPEEQDEYKEKVRREQLTYSVEILKDELEEEYGQKNSRSNREEVKEQLD HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC FSKNNKLSVFIKMLLVVLALVFLAGGIFYTSNTSDVAALANPINFFQQHAFREKTEFSEK CCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ISNEVRSLSESEARKNRNKEKLQLKSITENQTTTTKSSKASKKSSSLKESSQSSPSSTEA HHHHHHHHHHHHHHHCCCHHHEEHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC TTNYTIQAGDSLSVIADNLGTTVSEIQTLNPGLDAAALQPGAVIKVPETTTTTQGH CEEEEEECCCCHHHHHHHHCCHHHHHHHCCCCCCHHHCCCCCEEECCCCCCCCCCC >Mature Secondary Structure TNNNNKKLKVKATNLTKRFEMLETTSNKMKTLFGLNRDKGQEFWALRNVSFEVHDGETI CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCEE GIIGLNGSGKSTISTLISGTMTPTTGALEVNGDVSIIALGTGLIPNLTGRENIHVVGLMM EEEEECCCCHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEEE GMTNKEIENKLDDIINFSELGPFIDQPLKTYSSGMKAKLSFSIAAYQDPDILIIDEVLSV CCCCHHHHHHHHHHHCHHHHCHHHHHHHHHHHCCCEEEEEEEEEEECCCCEEEEHHHHHC GDGTFGQKSADKMFEFREQGKTILLISHDMLAIEKWCDKVLWLHYGEVKGYGSTEEILPQ CCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHH YINFVQWFIRLTPEEQDEYKEKVRREQLTYSVEILKDELEEEYGQKNSRSNREEVKEQLD HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC FSKNNKLSVFIKMLLVVLALVFLAGGIFYTSNTSDVAALANPINFFQQHAFREKTEFSEK CCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ISNEVRSLSESEARKNRNKEKLQLKSITENQTTTTKSSKASKKSSSLKESSQSSPSSTEA HHHHHHHHHHHHHHHCCCHHHEEHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC TTNYTIQAGDSLSVIADNLGTTVSEIQTLNPGLDAAALQPGAVIKVPETTTTTQGH CEEEEEECCCCHHHHHHHHCCHHHHHHHCCCCCCHHHCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11337471 [H]