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The map label for this gene is yxeN [H]

Identifier: 125624393

GI number: 125624393

Start: 1565567

End: 1566454

Strand: Reverse

Name: yxeN [H]

Synonym: llmg_1591

Alternate gene names: 125624393

Gene position: 1566454-1565567 (Counterclockwise)

Preceding gene: 125624394

Following gene: 125624392

Centisome position: 61.93

GC content: 36.94

Gene sequence:

>888_bases
ATGAAAAAAAACAAAAAAATAATTCTTGGAATTGCCTTACTTTTGGCACTTATCATTTTGCAAGCTCTTCCATTTCTCTT
AATTAAAGGTCAGTACAACTTTCATGACTTTTGGACAATGTTTTTCACAAAGATTTTCAGTTGGTCAGCCTTTGTGGACG
CCTTTGTACCAATTATTAAAATGATTCCATCTTCACTTGAAATGACAATCATTGCCATGATTTTTGGTTTGCTTTTGGGA
CTTATTCTTGCCTTAGTTCGTATCAATAAAATTCCTATTTTAAATCAACTTCGTGCTTTATTTGTCAGCTTTATTCGTGG
AACGCCAATTTTGGTGCAATTATATCTTTCTTATACAGGGATTCCACTGATTTTAAAAGCAATCAATATGAACTATGGAA
CGAATTATAATGTGAACACGATTCCGGCAATGCTTTTTGTAATTGTGGCCTTTGCCCTTAATGAAGGGGCTTATAATTCA
GAAACTATTCGAGCAGCGATCCAATCGGTAGATAAAGGACAAATTGAAGCGGCTAAATCACTTGGAATGACGAATTTCCA
AGTCTTTATGCGTGTCACTTTGCCAGAAGCGGCAACAGTTGCGACAGCTCCGTTAGGAAATGCTCTGATTGGTCTTTTGA
AATCTACTTCACTCGCTTTCGTTGCGGGTGTGGTAGAAATGACGGCTCGGGCTCAAATTATTGGTGGCTCAACTTTCCGA
CTGTTTGAAACTTATTTGGCCTTAGCCTTGGTTTATTGGCCAATCTGTATCATTTTTGAAATTTTGATTAGAGCATTAGA
GCGCAAGTTGGACGTCAGAATGCCAAATGATAAACGTAAAAATCGTGCTCAAATTTCTTTGAGTAAAAATCCGTTTGACC
AAGCATAA

Upstream 100 bases:

>100_bases
TAGTAAAAAGCATGATGCTAAACTGATAAGCTCAAAAATCCTAATAAACTCTGTCACTTTTTTACTGACAGAGTTTTGCC
TATTAGAAAATTAAAATAAT

Downstream 100 bases:

>100_bases
GGAGGGCTCTGATGATTAAAATTACAAATATAAGTAAAGCATTTTCTGGCAATCAAGTTCTTGAAAATATAAGTTTGGAC
ATTGAAGAAGGAGATGTCGT

Product: putative amino-acid ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKKNKKIILGIALLLALIILQALPFLLIKGQYNFHDFWTMFFTKIFSWSAFVDAFVPIIKMIPSSLEMTIIAMIFGLLLG
LILALVRINKIPILNQLRALFVSFIRGTPILVQLYLSYTGIPLILKAINMNYGTNYNVNTIPAMLFVIVAFALNEGAYNS
ETIRAAIQSVDKGQIEAAKSLGMTNFQVFMRVTLPEAATVATAPLGNALIGLLKSTSLAFVAGVVEMTARAQIIGGSTFR
LFETYLALALVYWPICIIFEILIRALERKLDVRMPNDKRKNRAQISLSKNPFDQA

Sequences:

>Translated_295_residues
MKKNKKIILGIALLLALIILQALPFLLIKGQYNFHDFWTMFFTKIFSWSAFVDAFVPIIKMIPSSLEMTIIAMIFGLLLG
LILALVRINKIPILNQLRALFVSFIRGTPILVQLYLSYTGIPLILKAINMNYGTNYNVNTIPAMLFVIVAFALNEGAYNS
ETIRAAIQSVDKGQIEAAKSLGMTNFQVFMRVTLPEAATVATAPLGNALIGLLKSTSLAFVAGVVEMTARAQIIGGSTFR
LFETYLALALVYWPICIIFEILIRALERKLDVRMPNDKRKNRAQISLSKNPFDQA
>Mature_295_residues
MKKNKKIILGIALLLALIILQALPFLLIKGQYNFHDFWTMFFTKIFSWSAFVDAFVPIIKMIPSSLEMTIIAMIFGLLLG
LILALVRINKIPILNQLRALFVSFIRGTPILVQLYLSYTGIPLILKAINMNYGTNYNVNTIPAMLFVIVAFALNEGAYNS
ETIRAAIQSVDKGQIEAAKSLGMTNFQVFMRVTLPEAATVATAPLGNALIGLLKSTSLAFVAGVVEMTARAQIIGGSTFR
LFETYLALALVYWPICIIFEILIRALERKLDVRMPNDKRKNRAQISLSKNPFDQA

Specific function: Probably part of the ABC transporter complex yxeMNO that could be involved in amino-acid import. May transport S- methylcysteine. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=220, Percent_Identity=39.5454545454545, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1787030, Length=227, Percent_Identity=32.15859030837, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1786873, Length=224, Percent_Identity=29.9107142857143, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI87082239, Length=205, Percent_Identity=31.219512195122, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1788645, Length=206, Percent_Identity=30.5825242718447, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786874, Length=214, Percent_Identity=29.9065420560748, Blast_Score=88, Evalue=8e-19,
Organism=Escherichia coli, GI1787086, Length=212, Percent_Identity=27.3584905660377, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1788646, Length=212, Percent_Identity=29.7169811320755, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787087, Length=241, Percent_Identity=24.896265560166, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32854; Mature: 32854

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNKKIILGIALLLALIILQALPFLLIKGQYNFHDFWTMFFTKIFSWSAFVDAFVPIIK
CCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIPSSLEMTIIAMIFGLLLGLILALVRINKIPILNQLRALFVSFIRGTPILVQLYLSYTG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCC
IPLILKAINMNYGTNYNVNTIPAMLFVIVAFALNEGAYNSETIRAAIQSVDKGQIEAAKS
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHH
LGMTNFQVFMRVTLPEAATVATAPLGNALIGLLKSTSLAFVAGVVEMTARAQIIGGSTFR
CCCCHHHHEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LFETYLALALVYWPICIIFEILIRALERKLDVRMPNDKRKNRAQISLSKNPFDQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MKKNKKIILGIALLLALIILQALPFLLIKGQYNFHDFWTMFFTKIFSWSAFVDAFVPIIK
CCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIPSSLEMTIIAMIFGLLLGLILALVRINKIPILNQLRALFVSFIRGTPILVQLYLSYTG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCC
IPLILKAINMNYGTNYNVNTIPAMLFVIVAFALNEGAYNSETIRAAIQSVDKGQIEAAKS
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHH
LGMTNFQVFMRVTLPEAATVATAPLGNALIGLLKSTSLAFVAGVVEMTARAQIIGGSTFR
CCCCHHHHEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LFETYLALALVYWPICIIFEILIRALERKLDVRMPNDKRKNRAQISLSKNPFDQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]