| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
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The map label for this gene is 125624383
Identifier: 125624383
GI number: 125624383
Start: 1555789
End: 1557126
Strand: Reverse
Name: 125624383
Synonym: llmg_1581
Alternate gene names: NA
Gene position: 1557126-1555789 (Counterclockwise)
Preceding gene: 125624384
Following gene: 125624382
Centisome position: 61.56
GC content: 42.45
Gene sequence:
>1338_bases ATGGACATCCAAAATATCAAAGAAACAATTGCGATGATTGAAGAACAAAATTTCGATATTCGCACAATAACAATGGGGAT CAGTCTTCTTGATTGTATTGATGCTGATATTGACAAAACCGCTGAAAAAATCTATCAAAAAATTGTCAATAAAGCAGGTA AACTTGTCGAAGTCGGCAATGAGATTGGACACGAACTTGGGATTAAGATTGTGAACAAACGAGTTTCGGTAACGCCAATC GCAATTATTGGTGCAGCAACAGCTGCTGATGATTATACTCCGCTTGCCCTGGCTATGGATCGCGCAGCAAAAGAAATAGG TATTGATTTTATCGGTGGCTATTCGGCACTGGTGCAAAAAGGCTATCAAAAAGGGGATGAGATTTTGATTAAATCTATGC CTAAAGCCCTAGCAGCAACTGAGCGCGTATGTGCATCAGTAAATGTTGGTTCAACTAAGAGCGGAATTAATATGACAGCA GTTCGAGATATGGGTGAAACCATCAAAATTATGTCGAAAGGGGACAAATGGCTCAATGCTAAACTTGTCGTTTTTGCTAA TGCTGTAGAAGACAATCCCTTTATGGCAGGGGCTTTTCATGGTGTAGGCGAAGCGGATACGATTATCAACGTTGGGGTTT CAGGGCCAGGTGTTGTTAAACGTGCCCTCGAAAAAGTTCGTGGCGAATCTTTTGATATCTTAGCTGAAACTATCAAGAAA ACAGCGTTTAAAATTACGAGAATTGGTCAACTGGTTGGACAAATGGCTTCTGAAAGACTGAATGTTGAATTTGGAATTGT TGATTTATCACTCGCACCTACTCCGGCAATTGGGGATTCAGTTGCGCGTGTCTTGGAAGAAATGGGCTTAGAAACTGTTG GAACTCATGGAACAACAGCCGCACTTGCCATGCTTAATGATGCCGTGAAAAAAGGCGGAGTCATGGCAGCTGAACGTGTT GGAGGACTTTCAGGAGCCTTTATTCCAGTTTCGGAAGATGAAGGAATGATAGCAGCCGTGAACTCTGGAGCGTTAAATAT CGAAAAATTAGAAGCGATGACTTGCGTTTGCTCAGTTGGACTGGACATGATTGCGATTCCTGAAGAAACACCAGCCTCTA CCATTGCAGCTATGATTGCTGATGAAGCGGCGATTGGTGTCATTAATCAAAAAACAACTGCTGTTCGGATTATCCCAATG GGTAAAGAAGGAGAGCAAATTGAATTCGGAGGTCTCTTTGGTGTGGCCCCCGTCATGCGTGTCAACAAGGCATCATCAGC AGATTTTATTGCTCGTGGTGGACAAATTCCAGCGCCAATTCACTCATTTAAAAACTAA
Upstream 100 bases:
>100_bases ATTAGTCGACGAATTACTTTTATTATTAAGCATTTTTACTGACAGAGATTAAAAATATTTCTGTCAGTAATATTTTAACC AAAACTAAGGAAATCAAATA
Downstream 100 bases:
>100_bases AATTGACTTCAAGGTCAATTTTTAATATTTTAAAAAAATGAAGAGCGCTTCCAAAAATGATATAATGATAGAAGTCGAAA ACGGAGGTTATTATATGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MDIQNIKETIAMIEEQNFDIRTITMGISLLDCIDADIDKTAEKIYQKIVNKAGKLVEVGNEIGHELGIKIVNKRVSVTPI AIIGAATAADDYTPLALAMDRAAKEIGIDFIGGYSALVQKGYQKGDEILIKSMPKALAATERVCASVNVGSTKSGINMTA VRDMGETIKIMSKGDKWLNAKLVVFANAVEDNPFMAGAFHGVGEADTIINVGVSGPGVVKRALEKVRGESFDILAETIKK TAFKITRIGQLVGQMASERLNVEFGIVDLSLAPTPAIGDSVARVLEEMGLETVGTHGTTAALAMLNDAVKKGGVMAAERV GGLSGAFIPVSEDEGMIAAVNSGALNIEKLEAMTCVCSVGLDMIAIPEETPASTIAAMIADEAAIGVINQKTTAVRIIPM GKEGEQIEFGGLFGVAPVMRVNKASSADFIARGGQIPAPIHSFKN
Sequences:
>Translated_445_residues MDIQNIKETIAMIEEQNFDIRTITMGISLLDCIDADIDKTAEKIYQKIVNKAGKLVEVGNEIGHELGIKIVNKRVSVTPI AIIGAATAADDYTPLALAMDRAAKEIGIDFIGGYSALVQKGYQKGDEILIKSMPKALAATERVCASVNVGSTKSGINMTA VRDMGETIKIMSKGDKWLNAKLVVFANAVEDNPFMAGAFHGVGEADTIINVGVSGPGVVKRALEKVRGESFDILAETIKK TAFKITRIGQLVGQMASERLNVEFGIVDLSLAPTPAIGDSVARVLEEMGLETVGTHGTTAALAMLNDAVKKGGVMAAERV GGLSGAFIPVSEDEGMIAAVNSGALNIEKLEAMTCVCSVGLDMIAIPEETPASTIAAMIADEAAIGVINQKTTAVRIIPM GKEGEQIEFGGLFGVAPVMRVNKASSADFIARGGQIPAPIHSFKN >Mature_445_residues MDIQNIKETIAMIEEQNFDIRTITMGISLLDCIDADIDKTAEKIYQKIVNKAGKLVEVGNEIGHELGIKIVNKRVSVTPI AIIGAATAADDYTPLALAMDRAAKEIGIDFIGGYSALVQKGYQKGDEILIKSMPKALAATERVCASVNVGSTKSGINMTA VRDMGETIKIMSKGDKWLNAKLVVFANAVEDNPFMAGAFHGVGEADTIINVGVSGPGVVKRALEKVRGESFDILAETIKK TAFKITRIGQLVGQMASERLNVEFGIVDLSLAPTPAIGDSVARVLEEMGLETVGTHGTTAALAMLNDAVKKGGVMAAERV GGLSGAFIPVSEDEGMIAAVNSGALNIEKLEAMTCVCSVGLDMIAIPEETPASTIAAMIADEAAIGVINQKTTAVRIIPM GKEGEQIEFGGLFGVAPVMRVNKASSADFIARGGQIPAPIHSFKN
Specific function: Unknown
COG id: COG2848
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0210 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007841 [H]
Pfam domain/function: PF05167 DUF711 [H]
EC number: NA
Molecular weight: Translated: 46775; Mature: 46775
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIQNIKETIAMIEEQNFDIRTITMGISLLDCIDADIDKTAEKIYQKIVNKAGKLVEVGN CCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEHHHH EIGHELGIKIVNKRVSVTPIAIIGAATAADDYTPLALAMDRAAKEIGIDFIGGYSALVQK HHHHHHCHHEECCCCEECEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHCCCHHHHHHH GYQKGDEILIKSMPKALAATERVCASVNVGSTKSGINMTAVRDMGETIKIMSKGDKWLNA HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCHHHHHHHCCCCCCCE KLVVFANAVEDNPFMAGAFHGVGEADTIINVGVSGPGVVKRALEKVRGESFDILAETIKK EEEEEEEECCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHH TAFKITRIGQLVGQMASERLNVEFGIVDLSLAPTPAIGDSVARVLEEMGLETVGTHGTTA HHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHH ALAMLNDAVKKGGVMAAERVGGLSGAFIPVSEDEGMIAAVNSGALNIEKLEAMTCVCSVG HHHHHHHHHHHCCCEEHHHCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCC LDMIAIPEETPASTIAAMIADEAAIGVINQKTTAVRIIPMGKEGEQIEFGGLFGVAPVMR CCEEECCCCCCHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCEEEECCCHHHHHHHH VNKASSADFIARGGQIPAPIHSFKN CCCCCCCHHHHCCCCCCCCHHHCCC >Mature Secondary Structure MDIQNIKETIAMIEEQNFDIRTITMGISLLDCIDADIDKTAEKIYQKIVNKAGKLVEVGN CCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEHHHH EIGHELGIKIVNKRVSVTPIAIIGAATAADDYTPLALAMDRAAKEIGIDFIGGYSALVQK HHHHHHCHHEECCCCEECEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHCCCHHHHHHH GYQKGDEILIKSMPKALAATERVCASVNVGSTKSGINMTAVRDMGETIKIMSKGDKWLNA HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCHHHHHHHCCCCCCCE KLVVFANAVEDNPFMAGAFHGVGEADTIINVGVSGPGVVKRALEKVRGESFDILAETIKK EEEEEEEECCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHH TAFKITRIGQLVGQMASERLNVEFGIVDLSLAPTPAIGDSVARVLEEMGLETVGTHGTTA HHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHH ALAMLNDAVKKGGVMAAERVGGLSGAFIPVSEDEGMIAAVNSGALNIEKLEAMTCVCSVG HHHHHHHHHHHCCCEEHHHCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCC LDMIAIPEETPASTIAAMIADEAAIGVINQKTTAVRIIPMGKEGEQIEFGGLFGVAPVMR CCEEECCCCCCHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCEEEECCCHHHHHHHH VNKASSADFIARGGQIPAPIHSFKN CCCCCCCHHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA