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The map label for this gene is ykiD [H]

Identifier: 125624305

GI number: 125624305

Start: 1469857

End: 1470630

Strand: Reverse

Name: ykiD [H]

Synonym: llmg_1499

Alternate gene names: 125624305

Gene position: 1470630-1469857 (Counterclockwise)

Preceding gene: 125624306

Following gene: 125624301

Centisome position: 58.14

GC content: 37.21

Gene sequence:

>774_bases
ATGAAGATTTCTGAATTTATGTCTAAATATGAAAGCTTTTGTCCAAAAGAGCTGGCAGTTGAAGGAGACCCAGTTGGATT
ACAAGTTGGTAATCCCGAACAAGAACTGACAAAAGTTTTGGTGACCTTGGATATTCGTGAGCAAACAGTAGCAGAAGCAA
AATCACTGGGTGTAGATTTGATTATTGCTAAACATCCTTTGATTTTTCGGCCATTGACTGCTCTAACTTCAATGGATAAC
CAAGAAAAATTAGTTTTAGATTTGGCTCAAGCTGGTATTGCCGTTTATACTAGTCATACCAATATTGATGTTGTCAAGGG
GGGATTGAACGATTATTTTGCTCAATTACTTGGACTTACTGATGTTGAGGTGCTGGATGATGATGAAGGATTGGGCCGTG
TCGGAAATATTGAAGGTACAGATTTGTCAGTGCTGACAGAAAAAGTGAAAGAAGTTTTTGAATTAGATAGACTACGACTT
GTCACTTATAATCATGATTTGACTCAAAAAATTGAACGAGTGGCAATTTGTGGCGGCTCTGGTGGGAAATTATGGCCGAA
AGCTTTAGCTAAAGGAGCTGATGTATATCTGACAGGAGATATTTATTATCATATCGGTCATGATATGCTGTCAGCCGGTC
TGATTGGAATAGACCCTGGACATTATATTGAGCAGAAATTTATCGGTTTAGTCGCTGATAAACTTCGATCTTTTGGTACA
GATGTCAAGATTTATGAAAGTCAAGAAAAGACAAATCCATTTTATGATATATAA

Upstream 100 bases:

>100_bases
TGAATACTTTGAATAAAATCATTGACCGTCTACCTGATGAACAAACTGAAAAACGCGAAGAAGTTTTGACAGAAATTGCC
AAAATAAAGGAGGTTCTTCA

Downstream 100 bases:

>100_bases
AAAAGACCCTCTTGGAGGGTCTTTTTTTAATTATCAACTCACTTTTTGTTTTCCACGGAAGTCAACAATTAACAAGTTGG
GACTGAGTAATTCAGCAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKISEFMSKYESFCPKELAVEGDPVGLQVGNPEQELTKVLVTLDIREQTVAEAKSLGVDLIIAKHPLIFRPLTALTSMDN
QEKLVLDLAQAGIAVYTSHTNIDVVKGGLNDYFAQLLGLTDVEVLDDDEGLGRVGNIEGTDLSVLTEKVKEVFELDRLRL
VTYNHDLTQKIERVAICGGSGGKLWPKALAKGADVYLTGDIYYHIGHDMLSAGLIGIDPGHYIEQKFIGLVADKLRSFGT
DVKIYESQEKTNPFYDI

Sequences:

>Translated_257_residues
MKISEFMSKYESFCPKELAVEGDPVGLQVGNPEQELTKVLVTLDIREQTVAEAKSLGVDLIIAKHPLIFRPLTALTSMDN
QEKLVLDLAQAGIAVYTSHTNIDVVKGGLNDYFAQLLGLTDVEVLDDDEGLGRVGNIEGTDLSVLTEKVKEVFELDRLRL
VTYNHDLTQKIERVAICGGSGGKLWPKALAKGADVYLTGDIYYHIGHDMLSAGLIGIDPGHYIEQKFIGLVADKLRSFGT
DVKIYESQEKTNPFYDI
>Mature_257_residues
MKISEFMSKYESFCPKELAVEGDPVGLQVGNPEQELTKVLVTLDIREQTVAEAKSLGVDLIIAKHPLIFRPLTALTSMDN
QEKLVLDLAQAGIAVYTSHTNIDVVKGGLNDYFAQLLGLTDVEVLDDDEGLGRVGNIEGTDLSVLTEKVKEVFELDRLRL
VTYNHDLTQKIERVAICGGSGGKLWPKALAKGADVYLTGDIYYHIGHDMLSAGLIGIDPGHYIEQKFIGLVADKLRSFGT
DVKIYESQEKTNPFYDI

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321217, Length=189, Percent_Identity=31.2169312169312, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI19921430, Length=211, Percent_Identity=30.8056872037915, Blast_Score=94, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 28316; Mature: 28316

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISEFMSKYESFCPKELAVEGDPVGLQVGNPEQELTKVLVTLDIREQTVAEAKSLGVDL
CCHHHHHHHHHHCCCHHHCCCCCCCEEEECCCHHHHHHHHHEEECHHHHHHHHHHCCEEE
IIAKHPLIFRPLTALTSMDNQEKLVLDLAQAGIAVYTSHTNIDVVKGGLNDYFAQLLGLT
EEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCEEEEECCHHHHHHHHHCCC
DVEVLDDDEGLGRVGNIEGTDLSVLTEKVKEVFELDRLRLVTYNHDLTQKIERVAICGGS
CEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHEEEEECCC
GGKLWPKALAKGADVYLTGDIYYHIGHDMLSAGLIGIDPGHYIEQKFIGLVADKLRSFGT
CCCCCHHHHHCCCCEEEEEEEEEEECHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHCCC
DVKIYESQEKTNPFYDI
CEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKISEFMSKYESFCPKELAVEGDPVGLQVGNPEQELTKVLVTLDIREQTVAEAKSLGVDL
CCHHHHHHHHHHCCCHHHCCCCCCCEEEECCCHHHHHHHHHEEECHHHHHHHHHHCCEEE
IIAKHPLIFRPLTALTSMDNQEKLVLDLAQAGIAVYTSHTNIDVVKGGLNDYFAQLLGLT
EEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCEEEEECCHHHHHHHHHCCC
DVEVLDDDEGLGRVGNIEGTDLSVLTEKVKEVFELDRLRLVTYNHDLTQKIERVAICGGS
CEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHEEEEECCC
GGKLWPKALAKGADVYLTGDIYYHIGHDMLSAGLIGIDPGHYIEQKFIGLVADKLRSFGT
CCCCCHHHHHCCCCEEEEEEEEEEECHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHCCC
DVKIYESQEKTNPFYDI
CEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]