| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
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The map label for this gene is 125624275
Identifier: 125624275
GI number: 125624275
Start: 1441125
End: 1443806
Strand: Reverse
Name: 125624275
Synonym: llmg_1467
Alternate gene names: NA
Gene position: 1443806-1441125 (Counterclockwise)
Preceding gene: 125624276
Following gene: 125624272
Centisome position: 57.08
GC content: 34.9
Gene sequence:
>2682_bases ATGCGGAAAAAAACCTTAAACAAAGAAATTCGTAGGTCAATTACGGGTTCATTAGGTCGTTTCATCTCTATTTTTTCTTT GATGCTTTTAGGAACTTTTGCTTTTGTCGGATTAAAAGTTTCTGGTCCGGATATGAGGGCAACTGCGGAAGAGTTTTATC GGCAGCATCAGTTAGCAGATTTAACGGTAACTTCAACTTTAGGATTGGATGAGACTGACCAAAGGCTGATTAATGAAACA AAAGGCTTAAAAAAAGCAGAATTCGGCTACTTTCAGGATTTGGTAATCAAGGGAAAAGAAAGCAGTCTACGCTTATTTTC TAAGCCAGATGAATTGTCAACCTATGAGTTAATGTCTGGCAAGTTGCCTCAAAGCAATTCAGAAATTGCCTTGGATTATT TATATGATAGTCAGTATAAAATAGGCCAAAGCATTGATTTTACCCCTCCTAAATCTGAGGATTCTGATCTGTTAAAAAAT CATTCTTTTAAAATCGTTGGATTTGTTAAATCTAGTGAATATGTCGATAAGAGTAATTTTGGCGCAACGACGGTAGGGAC TGGGAAGCTCAATGGTTATGGGCTTGTGACTAAGGATGCCTTTGATTCTAAAGTTTATATGATTGCTCGTTTATCTTATA AAAATTTACAAAATATCTCCATTTTTGATGACAAGTACGATAATCGACTAAAAAGAGAACAAAAAGCTTTAGAAAATACA TTTAAAAATCAACCTGAGAAACGTTTAGCAGCACTTAAAGTGGACCCAGAAAAACAGATTATTGAGGCTAAAAGTCAAAT TTCCCATGAAGAAAGTCAACTAAAGCAGCAAGAAAAGCAATTAATTGCTCAAAAGAATCAAATTGGGGAAAATGCATCCG CTCAAGTGATTGAGCAAATCAATGGGGCTAAAAATCAAATTGATGCTGGAAAAGAAAAGATTGCATCGGCTAAAGCAGAG CTGGCTAAAAAAGAAGCAGCTTTAAATCAACTTGAAGAACCAACTTATCAGATTAATAATCGTAAAGAAGGAAATCCAGG TTACAAAACTTTTTTGGAGGATTCAACAAGAATTGACAGTCTTTCAAATATTTTTCCGGTTGTCCTTTTTGCCATTGCTT TATTAGTCAGTTTGACAACAATGACCCGTTTTGTTGAAGAAGAACGAGGAAACCTCGGATTACTTAAGGCTTTGGGATAT TCAAATCGTGAGATTCGTAAGAAATTTATGGTTTATGGTTTAGTTTCTAGTGGTCTAGGTGCTTTAGTAGGAACAATTAT CGGACATACCTTTTTACCGCTTGCGGTATTTAATGCTTACACGGCTTCATCTACCTTTAGTAATTTGCGTTTAACTTTCT CACCCCTATGGACAATAGTCGCTTTTGCCATTGCCATTGCTTGTAGTCTTTTACCAGCATACTGGGTTGTCCGAAAGGAA TTAAAAGAAGTACCAGCTAGTTTATTTTTAGCAAAAGTGCCAAAAGCAGGTTCACGCATTCTTTTAGAGAAAATGGATTT TATTTGGAAAAGAATGAGTTTTACTTACAAAGTGACGGCTCGAAATCTTTTCCGTTATAAAAAAAGGATGTTAATGACCA TCTTTGGTGTCGCTGGATGTACGGCTTTACTTGTCATGGGATTTGGGATTCGTGATTCGATTTCTGGACTTGCATCAAAA CAATTTGGGCAAATTTTGCATTATGATATGATTGCCATTGAAAAAAATAAAGTTAGTGACAAAGAAAAAGAAGCAATCAA TAAAAAATTGAACTCGTCAGAAATTGAGAATTATTTGCCAATTGCCTTTGAAAATTTGACAAAAGAAGCCAGTGGAAAAT TAGAAAAGCAAGAGGTCAGCTTAATTGCGACGAATCAATCTGATGATTTATCAAAATATGTTAGTTTAGAATCTCGTAAA AATAATCAAAAGATTGTATTAAATGATTCTGGAGCAGTCATTTCGGAGAAATTTGCTGAACTTTTAGGTCTAAAAGTTGG AGATTCTCTGACGCTTAAAGATGATGAAAATAAGCCTGTAAGGATAAAAGTGTCGGCAATTACTGAAATGTATATGGGCC ATTATATTTTCATGAACCAATCGGTTTACCAGAAAGTTTTTAAAAAAGATTTTATGACCAATGGTCAATTGATTAAGTTA AAAAATGACTCTGTAAATAATATTCAAAAGATGTCGGCTCAATTGATGCAGGAAGACGGAATTCAGGCTATTTCACAAAA TAGTGACCTTAAAAAAGTGATTGAATCCTTTATGTATGGCATTAATAGTGTCATGATTGTTTTGATTACTTGTGCCATTC TGCTTGCGATTGTTGTCATCTATAATTTAACAAATATCAATGTTTCCGAGAGAATTCGTGAATTAGCGACAATCAAAGTT TTAGGATTTTATGACCGTGAAGTCACACTTTATATTTATCGGGAAACGATTTTATTAAGCTTTTTAGGAATTCTGGTTGG TTTTGGTTTGGGGAATTATTTTCATCAGGTTATTATGAACCAATTGTCAGCTGACCAAATCATGTTTGCACCGGGGCTAC TTTGGACAAATCTTTTGTTATCAGCAGCGATTACTTTTGCGACCACTCTTTTGCTGGCGCTTGTTGTTCACTTCAAATTA AAAGCCGTGGACATGCTTGGGGCTCTGAAATCAGTAGATTAA
Upstream 100 bases:
>100_bases ACCAATTGCCAATCGAGTGATTCAGATGCATGATGGAAAAATTAAAAAAATTGAAAATAATAGCCAACCAGAAGATATTG ATAGAATTGAGTGGTGACTT
Downstream 100 bases:
>100_bases TCATAAAAATCTTACTGACAGCTTTTTAAGAAATAAAAAAAATTACTGACAGAAATTTCTGTGAGTAATTTTTTTTATTA TTTTTCAACTTTACGTTTAA
Product: ABC transporter permease
Products: NA
Alternate protein names: Permease; ABC Transporter Permease; Peptide ABC Transporter Permease; ABC Transporter; Efflux ABC Transporter Permease Protein; Permease Domain Protein; Antimicrobial Peptide ABC Transporter Permease; Permease Domain-Containing Protein; Efflux ABC Transporter Permease; ABC-Type Antimicrobial Peptide Transport System Protein; Large Transmembrane Protein Possibly Involved In Transport; ABC-Type Transport System Permease; ABC-Type Transport System; ABC Transporter Permease Component
Number of amino acids: Translated: 893; Mature: 893
Protein sequence:
>893_residues MRKKTLNKEIRRSITGSLGRFISIFSLMLLGTFAFVGLKVSGPDMRATAEEFYRQHQLADLTVTSTLGLDETDQRLINET KGLKKAEFGYFQDLVIKGKESSLRLFSKPDELSTYELMSGKLPQSNSEIALDYLYDSQYKIGQSIDFTPPKSEDSDLLKN HSFKIVGFVKSSEYVDKSNFGATTVGTGKLNGYGLVTKDAFDSKVYMIARLSYKNLQNISIFDDKYDNRLKREQKALENT FKNQPEKRLAALKVDPEKQIIEAKSQISHEESQLKQQEKQLIAQKNQIGENASAQVIEQINGAKNQIDAGKEKIASAKAE LAKKEAALNQLEEPTYQINNRKEGNPGYKTFLEDSTRIDSLSNIFPVVLFAIALLVSLTTMTRFVEEERGNLGLLKALGY SNREIRKKFMVYGLVSSGLGALVGTIIGHTFLPLAVFNAYTASSTFSNLRLTFSPLWTIVAFAIAIACSLLPAYWVVRKE LKEVPASLFLAKVPKAGSRILLEKMDFIWKRMSFTYKVTARNLFRYKKRMLMTIFGVAGCTALLVMGFGIRDSISGLASK QFGQILHYDMIAIEKNKVSDKEKEAINKKLNSSEIENYLPIAFENLTKEASGKLEKQEVSLIATNQSDDLSKYVSLESRK NNQKIVLNDSGAVISEKFAELLGLKVGDSLTLKDDENKPVRIKVSAITEMYMGHYIFMNQSVYQKVFKKDFMTNGQLIKL KNDSVNNIQKMSAQLMQEDGIQAISQNSDLKKVIESFMYGINSVMIVLITCAILLAIVVIYNLTNINVSERIRELATIKV LGFYDREVTLYIYRETILLSFLGILVGFGLGNYFHQVIMNQLSADQIMFAPGLLWTNLLLSAAITFATTLLLALVVHFKL KAVDMLGALKSVD
Sequences:
>Translated_893_residues MRKKTLNKEIRRSITGSLGRFISIFSLMLLGTFAFVGLKVSGPDMRATAEEFYRQHQLADLTVTSTLGLDETDQRLINET KGLKKAEFGYFQDLVIKGKESSLRLFSKPDELSTYELMSGKLPQSNSEIALDYLYDSQYKIGQSIDFTPPKSEDSDLLKN HSFKIVGFVKSSEYVDKSNFGATTVGTGKLNGYGLVTKDAFDSKVYMIARLSYKNLQNISIFDDKYDNRLKREQKALENT FKNQPEKRLAALKVDPEKQIIEAKSQISHEESQLKQQEKQLIAQKNQIGENASAQVIEQINGAKNQIDAGKEKIASAKAE LAKKEAALNQLEEPTYQINNRKEGNPGYKTFLEDSTRIDSLSNIFPVVLFAIALLVSLTTMTRFVEEERGNLGLLKALGY SNREIRKKFMVYGLVSSGLGALVGTIIGHTFLPLAVFNAYTASSTFSNLRLTFSPLWTIVAFAIAIACSLLPAYWVVRKE LKEVPASLFLAKVPKAGSRILLEKMDFIWKRMSFTYKVTARNLFRYKKRMLMTIFGVAGCTALLVMGFGIRDSISGLASK QFGQILHYDMIAIEKNKVSDKEKEAINKKLNSSEIENYLPIAFENLTKEASGKLEKQEVSLIATNQSDDLSKYVSLESRK NNQKIVLNDSGAVISEKFAELLGLKVGDSLTLKDDENKPVRIKVSAITEMYMGHYIFMNQSVYQKVFKKDFMTNGQLIKL KNDSVNNIQKMSAQLMQEDGIQAISQNSDLKKVIESFMYGINSVMIVLITCAILLAIVVIYNLTNINVSERIRELATIKV LGFYDREVTLYIYRETILLSFLGILVGFGLGNYFHQVIMNQLSADQIMFAPGLLWTNLLLSAAITFATTLLLALVVHFKL KAVDMLGALKSVD >Mature_893_residues MRKKTLNKEIRRSITGSLGRFISIFSLMLLGTFAFVGLKVSGPDMRATAEEFYRQHQLADLTVTSTLGLDETDQRLINET KGLKKAEFGYFQDLVIKGKESSLRLFSKPDELSTYELMSGKLPQSNSEIALDYLYDSQYKIGQSIDFTPPKSEDSDLLKN HSFKIVGFVKSSEYVDKSNFGATTVGTGKLNGYGLVTKDAFDSKVYMIARLSYKNLQNISIFDDKYDNRLKREQKALENT FKNQPEKRLAALKVDPEKQIIEAKSQISHEESQLKQQEKQLIAQKNQIGENASAQVIEQINGAKNQIDAGKEKIASAKAE LAKKEAALNQLEEPTYQINNRKEGNPGYKTFLEDSTRIDSLSNIFPVVLFAIALLVSLTTMTRFVEEERGNLGLLKALGY SNREIRKKFMVYGLVSSGLGALVGTIIGHTFLPLAVFNAYTASSTFSNLRLTFSPLWTIVAFAIAIACSLLPAYWVVRKE LKEVPASLFLAKVPKAGSRILLEKMDFIWKRMSFTYKVTARNLFRYKKRMLMTIFGVAGCTALLVMGFGIRDSISGLASK QFGQILHYDMIAIEKNKVSDKEKEAINKKLNSSEIENYLPIAFENLTKEASGKLEKQEVSLIATNQSDDLSKYVSLESRK NNQKIVLNDSGAVISEKFAELLGLKVGDSLTLKDDENKPVRIKVSAITEMYMGHYIFMNQSVYQKVFKKDFMTNGQLIKL KNDSVNNIQKMSAQLMQEDGIQAISQNSDLKKVIESFMYGINSVMIVLITCAILLAIVVIYNLTNINVSERIRELATIKV LGFYDREVTLYIYRETILLSFLGILVGFGLGNYFHQVIMNQLSADQIMFAPGLLWTNLLLSAAITFATTLLLALVVHFKL KAVDMLGALKSVD
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100170; Mature: 100170
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKTLNKEIRRSITGSLGRFISIFSLMLLGTFAFVGLKVSGPDMRATAEEFYRQHQLAD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHC LTVTSTLGLDETDQRLINETKGLKKAEFGYFQDLVIKGKESSLRLFSKPDELSTYELMSG EEEEEECCCCHHHHHHHHHHCCCCHHHCCHHHHHHEECCCCCCEECCCCCCCCHHHHHCC KLPQSNSEIALDYLYDSQYKIGQSIDFTPPKSEDSDLLKNHSFKIVGFVKSSEYVDKSNF CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCCCC GATTVGTGKLNGYGLVTKDAFDSKVYMIARLSYKNLQNISIFDDKYDNRLKREQKALENT CCEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHH FKNQPEKRLAALKVDPEKQIIEAKSQISHEESQLKQQEKQLIAQKNQIGENASAQVIEQI HCCCCHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH NGAKNQIDAGKEKIASAKAELAKKEAALNQLEEPTYQINNRKEGNPGYKTFLEDSTRIDS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHCCCHHHHH LSNIFPVVLFAIALLVSLTTMTRFVEEERGNLGLLKALGYSNREIRKKFMVYGLVSSGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHH ALVGTIIGHTFLPLAVFNAYTASSTFSNLRLTFSPLWTIVAFAIAIACSLLPAYWVVRKE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKEVPASLFLAKVPKAGSRILLEKMDFIWKRMSFTYKVTARNLFRYKKRMLMTIFGVAGC HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHH TALLVMGFGIRDSISGLASKQFGQILHYDMIAIEKNKVSDKEKEAINKKLNSSEIENYLP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCHHHHHHHCC IAFENLTKEASGKLEKQEVSLIATNQSDDLSKYVSLESRKNNQKIVLNDSGAVISEKFAE HHHHHHHHHHCCCCCHHHEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH LLGLKVGDSLTLKDDENKPVRIKVSAITEMYMGHYIFMNQSVYQKVFKKDFMTNGQLIKL HHCCCCCCCEEEECCCCCCEEEEHHHHHHHHHHHHEEECHHHHHHHHHHHHCCCCCEEEE KNDSVNNIQKMSAQLMQEDGIQAISQNSDLKKVIESFMYGINSVMIVLITCAILLAIVVI CCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YNLTNINVSERIRELATIKVLGFYDREVTLYIYRETILLSFLGILVGFGLGNYFHQVIMN HHCCCCCHHHHHHHHHHHHEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLSADQIMFAPGLLWTNLLLSAAITFATTLLLALVVHFKLKAVDMLGALKSVD HHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKKTLNKEIRRSITGSLGRFISIFSLMLLGTFAFVGLKVSGPDMRATAEEFYRQHQLAD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHC LTVTSTLGLDETDQRLINETKGLKKAEFGYFQDLVIKGKESSLRLFSKPDELSTYELMSG EEEEEECCCCHHHHHHHHHHCCCCHHHCCHHHHHHEECCCCCCEECCCCCCCCHHHHHCC KLPQSNSEIALDYLYDSQYKIGQSIDFTPPKSEDSDLLKNHSFKIVGFVKSSEYVDKSNF CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCCCC GATTVGTGKLNGYGLVTKDAFDSKVYMIARLSYKNLQNISIFDDKYDNRLKREQKALENT CCEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHH FKNQPEKRLAALKVDPEKQIIEAKSQISHEESQLKQQEKQLIAQKNQIGENASAQVIEQI HCCCCHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH NGAKNQIDAGKEKIASAKAELAKKEAALNQLEEPTYQINNRKEGNPGYKTFLEDSTRIDS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHCCCHHHHH LSNIFPVVLFAIALLVSLTTMTRFVEEERGNLGLLKALGYSNREIRKKFMVYGLVSSGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHH ALVGTIIGHTFLPLAVFNAYTASSTFSNLRLTFSPLWTIVAFAIAIACSLLPAYWVVRKE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKEVPASLFLAKVPKAGSRILLEKMDFIWKRMSFTYKVTARNLFRYKKRMLMTIFGVAGC HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHH TALLVMGFGIRDSISGLASKQFGQILHYDMIAIEKNKVSDKEKEAINKKLNSSEIENYLP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCHHHHHHHCC IAFENLTKEASGKLEKQEVSLIATNQSDDLSKYVSLESRKNNQKIVLNDSGAVISEKFAE HHHHHHHHHHCCCCCHHHEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH LLGLKVGDSLTLKDDENKPVRIKVSAITEMYMGHYIFMNQSVYQKVFKKDFMTNGQLIKL HHCCCCCCCEEEECCCCCCEEEEHHHHHHHHHHHHEEECHHHHHHHHHHHHCCCCCEEEE KNDSVNNIQKMSAQLMQEDGIQAISQNSDLKKVIESFMYGINSVMIVLITCAILLAIVVI CCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YNLTNINVSERIRELATIKVLGFYDREVTLYIYRETILLSFLGILVGFGLGNYFHQVIMN HHCCCCCHHHHHHHHHHHHEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLSADQIMFAPGLLWTNLLLSAAITFATTLLLALVVHFKLKAVDMLGALKSVD HHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA