Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
---|---|
Accession | NC_009004 |
Length | 2,529,478 |
Click here to switch to the map view.
The map label for this gene is 125624189
Identifier: 125624189
GI number: 125624189
Start: 1344187
End: 1345428
Strand: Direct
Name: 125624189
Synonym: llmg_1369a
Alternate gene names: NA
Gene position: 1344187-1345428 (Clockwise)
Preceding gene: 125624163
Following gene: 125624245
Centisome position: 53.14
GC content: 35.27
Gene sequence:
>4184_bases ATGGTTTACACAAAACACATTATTGTTCATAAATTAAAACATTTACGCCAGGCAAAAGACTATGTAGAAAATGCGGAAAA AACTTTGGTGAATGAAAGTAACGAAGATCATCTCACAAATCTTTTTCCTTATATTTCAAATCCAGACAAGACAATGAGTA AGCAACTTGTTTCTGGTCATGGTATCACAAATGTTTATGATGCGGCCAATGAATTTATTGCGACAAAAAAATTAAAAGCA CTATCCAAAGGAACTGACTTTAATTTTGATCCGCAAACTGGAAAGGTAAGATTCAATGTAGAAAGCTTAGAGAAAAATAA TGCGGTGCTTGGTCATCACCTCATCCAATCATTTTCTCCTGATGACAATCTAACTCCTGAACAAATTCATGAAATAGGTC GTCAAACCATATTAGAATTTACAGGTGGCGAATATGAATTTGTGATTGCAACCCACGTCGATCGTGAACACATCCATAAC GTGCGCCCAGATAGGGTGTTAAGTCAAGTAGTTTAAGGTACTACTCTGTAAGATAACACAGAAAACAGCCAACCTAACCG AAAAGCGAAAGCTGATACGGGAACAGAGCACGGTTGGAAAGCGATGAGTTACCTAAAGACAATCGGGTACGACTGAGTCG CAATGTTAATCAGATATAAGGTATAAGTTGTGTTTACTGAACGCAAGTTTCTAATTTCGGTTATGTGTCGATAGAGGAAA GTGTCTGAAACCTCTAGTACAAAGAAAGGTAAGTTATGGTTGTGGACTTATCTGTTATCACCACATTTGTACAATCTGTA GGAGAACCTATGGGAACGAAACGAAAGCGATGCCGAGAATCTGAATTTACCAAGACTTAACACTAACTGGGGATACCCTA AACAAGAATGCCTAATAGAAAGGAGGAAAAAGGCTATAGCACTAGAGCTTGAAAATCTTGCAAGGGTACGGAGTACTCGT AGTAGTCTGAGAAGGGTAACGCCCTTTACATGGCAAAGGGGTACAGTTATTGTGTACTAAAATTAAAAATTGATTAGGGA GGAAAACCTCAAAATGAAACCAACAATGGCAATTTTAGAAAGAATCAGTAAAAATTCACAAGAAAATATAGACGAAGTTT TTACAAGACTTTATCGTTATCTTTTACGTCCAGATATTTATTACGTGGCGTATCAAAATTTATATTCCAATAAAGGAGCT TCCACAAAAGGAATATTAGATGATACAGCGGATGGCTTTAGTGAAGAAAAAATAAAAAAGATTATTCAATCTTTAAAAGA CGGAACTTACTATCCTCAACCTGTACGAAGAATGTATATTGCAAAAAAGAATTCTAAAAAGATGAGACCTTTAGGAATTC CAACTTTCACAGATAAATTGATCCAAGAAGCTGTGAGAATAATTCTTGAATCTATCTATGAACCGGTATTCGAAGATGTG TCTCACGGTTTTAGACCTCAACGAAGCTGTCACACAGCTTTGAAAACAATCAAAAGAGAGTTTGGCGGCGCAAGATGGTT TGTGGAGGGAGATATAAAAGGCTGCTTCGATAATATAGACCACGTTACACTCATTGGACTCATCAATCTTAAAATCAAAG ATATGAAAATGAGCCAATTGATTTATAAATTTCTAAAAGCAGGTTATCTGGAAAACTGGCAGTATCACAAAACTTACAGC GGAACACCTCAAGGTGGAATTCTATCTCCTCTTTTGGCCAACATCTATCTTCATGAATTGGATAAGTTTGTTTTACAACT CAAAATGAAGTTTGACCGAGAAAGTCCAGAAAGAATAACACCTGAATATCGGGAACTTCACAATGAGATAAAAAGAATTT CTCACCGTCTCAAGAAGTTGGAGGGTGAAGAAAAAGCTAAAGTTCTTTTAGAATATCAAGAAAAACGTAAAAGATTACCC ACACTCCCCTGTACCTCACAGACAAATAAAGTATTGAAATACGTCCGGTATGCGGACGACTTCATTATCTCTGTTAAAGG AAGCAAAGAGGACTGTCAATGGATAAAAGAACAATTAAAACTTTTTATTCATAACAAGCTAAAAATGGAATTGAGTGAAG AAAAAACACTCATCACACATAGCAGTCAACCCGCTCGTTTTCTGGGATATGATATACGAGTAAGGAGAAGTGGAACGATA AAACGATCTGGTAAAGTCAAAAAGAGAACACTCAATGGGAGTGTAGAACTCCTTATTCCTCTTCAAGACAAAATTCGTCA ATTTATTTTTGACAAGAAAATAGCTATCCAAAAGAAAGATAGCTCATGGTTTCCAGTTCACAGGAAATATCTTATTCGTT CAACAGACTTAGAAATCATCACAATTTATAATTCTGAATTAAGAGGGATTTGTAATTACTACGGTCTAGCAAGTAATTTT AACCAGCTCAATTATTTTGCTTATCTTATGGAATACAGCTGTCTAAAAACGATAGCCTCCAAACATAAGGGAACACTTTC AAAAACCATTTCCATGTTTAAAGATGGAAGTGGTTCGTGGGGCATCCCGTATGAGATAAAGCAAGGTAAGCAGCGCCGTT ATTTTGCAAATTTTAGTGAATGTAAATCCCCTTATCAATTTACGGATGAGATAAGTCAAGCTCCTGTATTGTATGGCTAT GCCCGGAATACTCTTGAAAACAGGTTAAAAGCTAAATGTTGTGAATTATGTGGAACATCTGATGAAAATACTTCCTATGA AATTCACCATGTCAATAAGGTCAAAAATCTTAAAGGCAAAGAAAAATGGGAAATGGCAATGATAGCGAAACAACGTAAAA CTCTTGTTGTATGCTTTCATTGTCATCGTCACGTGATTCATAAACACAAGTGAATTTTTACGAACGAACAATAACAGAGC CGTATACTCCGAGAGGGGTACGTACGGTTCCCGAAGAGGGTGGTGCAAACCAGTCACAGTAATGTGAACAAGGCGGTACC TCCCTACTTCACCATATCATTTTTAATTCTACGAATCTTTATACTGGCAAACAATTTGACTGGAAAGTCATTCCTAAAGA GAAAACAAAAAGCGGCAAAGCTTATGATGTGACCAAAAATAATTTTGAAAAAGTCTCTGATAAAATTGCTTCACGTTATG GCGCAAAAATTATTGAAAAGTCTCCAGGTAACTCTCACTTAAAATATACAAAATGGCAAACTCAGTCCATTTATAAAAGT CAAATCAAACAACGGTTAGACTATCTTTTAGAAATGTCATCAGATATTGAAGACTTCAAAAGAAAAGCAACGGCTTTAAA TTTATCCTTTGATTTTTCTGGCAAGTGGACCACTTATCGGCTGCTTGATGAACCTCAAATGAAAAACACACGTGGACGGA ATCTTGATAAAAATCGTCCTGAAAAATACAATTTGGAATCTATTATTGAACGGCTCGAAACAAATGAGCTTTCACTTACG GTTGATGAAGTAGTGGAGCGGTATGAGGAAAAAGTTGACGTAGTTAAACAAGATTTTGATTATCAAGTTACGGTTGAAAA AGGGCAAATTGACCACATGACAAGTAAAGGATTTTACCTTAACGTTGACTTTGGGATTGCGGATCGTGGTCAAATTTTTA TTGGCGGTTATAAAGTTGACCAACTTGAAAATAGGGACTGCGTGCTTTATCTGAAGAAGAATGAAACCTTTCGTCTTTTG AGTGAAAAGGAGGCCTCCTTCACCAAGTATTTGACTGGTCATGACCTCGCAAAACAGTTAGGGCTTTATAATGGAACTGT TCCTTTAAAGAAAGAACCTGTGATATCCACAATTAATCAGTTGGTCGATGCGATTAACTTTTTAGCTGAACACGGCGTTA CTGAAGGGACTCAATTTAATAATATGGAGAGCCAACTCATGAGCGCTCTTGGGGAGGCGGAAGAAAAACTTTATGTTATT GATAATAAAATTATGGAGTTAACCAAAATTGCAAAGTTACTCATTGAAAAAGAGTCGGATCATTCTCAAGCGGTTATTAA TGAATTAGAGAATCTAGGAGTGGGTCCGTCAATAAAATATCAAGACATTCACCAAGAACTTCAGTCTGAAAAAATGAGTC GAAAAATACTCAAAAACAAATTTGAACAAACCGTTGATGAGATTAATACTTTCAATGAAATTAGAGTTACTACCCTTGAA GAAAATAAAGGAAAAATACTATAA
Upstream 100 bases:
>100_bases CAGGAGAAGATATTAATGATTTATCTCAGCAGCTCTCTGAAATTCAAGTAATGATTTCAGAACGATTTAAAGAAGAATTG AAACAAGAAAGATTAATCTA
Downstream 100 bases:
>100_bases TTTCTTACGCTATCAAAACTATAACAGAAATTTGTATAGTTTATGAACGGATGTAGTAAGTTTCATAATAAATAATTAGA ACTGCTATGAAGTTAAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>584_residues MVYTKHIIVHKLKHLRQAKDYVENAEKTLVNESNEDHLTNLFPYISNPDKTMSKQLVSGHGITNVYDAANEFIATKKLKA LSKGTDFNFDPQTGKVRFNVESLEKNNAVLGHHLIQSFSPDDNLTPEQIHEIGRQTILEFTGGEYEFVIATHVDREHIHN VRPDRVLSQVVCEQGGTSLLHHIIFNSTNLYTGKQFDWKVIPKEKTKSGKAYDVTKNNFEKVSDKIASRYGAKIIEKSPG NSHLKYTKWQTQSIYKSQIKQRLDYLLEMSSDIEDFKRKATALNLSFDFSGKWTTYRLLDEPQMKNTRGRNLDKNRPEKY NLESIIERLETNELSLTVDEVVERYEEKVDVVKQDFDYQVTVEKGQIDHMTSKGFYLNVDFGIADRGQIFIGGYKVDQLE NRDCVLYLKKNETFRLLSEKEASFTKYLTGHDLAKQLGLYNGTVPLKKEPVISTINQLVDAINFLAEHGVTEGTQFNNME SQLMSALGEAEEKLYVIDNKIMELTKIAKLLIEKESDHSQAVINELENLGVGPSIKYQDIHQELQSEKMSRKILKNKFEQ TVDEINTFNEIRVTTLEENKGKIL
Sequences:
>Translated_414_residues L*YFSFIFFKGSNSNFIESINLINGLFKFVFEYFSTHFFRLKFLVNVLIFY*RTHS*IL*FINNRLRMIRLFFNE*LCNF G*LHNFIINNIKFFFRLPKSAHELALHIIKLSPFSNAVFS*KVNRIDQLINCGYHRFFL*RNSSIIKP*LFCEVMTSQIL GEGGLLFTQKTKGFILLQIKHAVPIFKLVNFITANKNLTTIRNPKVNVKVKSFTCHVVNLPFFNRNLIIKILFNYVNFFL IPLHYFINRK*KLICFEPFNNRFQIVFFRTIFIKIPSTCVFHLRFIKQPISGPLARKIKG*I*SRCFSFEVFNI**HF*K IV*PLFDLTFINGLSLPFCIF*VRVTWRLFNNFCAIT*SNFIRDFFKIIFGHIISFAAFCFLFRNDFPVKLFASIKIRRI KNDMVK*GGTALFT >Mature_414_residues L*YFSFIFFKGSNSNFIESINLINGLFKFVFEYFSTHFFRLKFLVNVLIFY*RTHS*IL*FINNRLRMIRLFFNE*LCNF G*LHNFIINNIKFFFRLPKSAHELALHIIKLSPFSNAVFS*KVNRIDQLINCGYHRFFL*RNSSIIKP*LFCEVMTSQIL GEGGLLFTQKTKGFILLQIKHAVPIFKLVNFITANKNLTTIRNPKVNVKVKSFTCHVVNLPFFNRNLIIKILFNYVNFFL IPLHYFINRK*KLICFEPFNNRFQIVFFRTIFIKIPSTCVFHLRFIKQPISGPLARKIKG*I*SRCFSFEVFNI**HF*K IV*PLFDLTFINGLSLPFCIF*VRVTWRLFNNFCAIT*SNFIRDFFKIIFGHIISFAAFCFLFRNDFPVKLFASIKIRRI KNDMVK*GGTALFT
Specific function: Unknown
COG id: COG3843
COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46372; Mature: 46372
Theoretical pI: Translated: 11.24; Mature: 11.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure LYFSFIFFKGSNSNFIESINLINGLFKFVFEYFSTHFFRLKFLVNVLIFYRTHSILFINN CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC RLRMIRLFFNELCNFGLHNFIINNIKFFFRLPKSAHELALHIIKLSPFSNAVFSKVNRID HHHHHHHHHHHHHHCCHHHHHHHCCCEEEECCCCHHHHEEEEEEECCCCHHHHHHHHHHH QLINCGYHRFFLRNSSIIKPLFCEVMTSQILGEGGLLFTQKTKGFILLQIKHAVPIFKLV HHHHCCHHEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCHHHHHH NFITANKNLTTIRNPKVNVKVKSFTCHVVNLPFFNRNLIIKILFNYVNFFLIPLHYFINR HHHHCCCCEEEECCCEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC KKLICFEPFNNRFQIVFFRTIFIKIPSTCVFHLRFIKQPISGPLARKIKGISRCFSFEVF CEEEEECCCCCCEEEEEEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEE NIHFKIVPLFDLTFINGLSLPFCIFVRVTWRLFNNFCAITSNFIRDFFKIIFGHIISFAA EEEEEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FCFLFRNDFPVKLFASIKIRRIKNDMVKGGTALFT HHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA