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The map label for this gene is tnp981 [C]

Identifier: 125624090

GI number: 125624090

Start: 1232526

End: 1233140

Strand: Direct

Name: tnp981 [C]

Synonym: llmg_1265

Alternate gene names: 125624090

Gene position: 1232526-1233140 (Clockwise)

Preceding gene: 125624089

Following gene: 125624091

Centisome position: 48.73

GC content: 36.91

Gene sequence:

>615_bases
ATGGCTCAAACCATACAAACTTTAGCACTCAATGTCAGACTAAGCTGTCAACTCCTTGATGTTCCTGAATCAAGTTATTA
TGAACGGATTAACCGACATCCATCTAAAACTCAATTAAGGAGACAATACCTGTCACTCAAAATTTCTCAACTCTTCAATG
CTAACCGAGGAATCTATGGTGCTCCTAAAATTCATCATCTTCTACTTAAACAAGGGGAAAAAGTCGGGTTAAAACTGGTA
CAGAAGCTAATGAAGCAACTTCAACTCAAGTCTGTAGTCATTAAGAAATTTAAGCCTGGATACTCACTAAGTGATCACAT
CAATCGAAAAAATCTCATACAGACTGAACCTACAAAGAAAAATAAGGTTTGGTCAACCGACATTACTTATATTCCTACTC
AACAAGGATGGGCTTATCTCTCAACCATTATGGATCGTTATACTAAAAAAGTCATTGCTTGGGATTTGGGCAAGCGAATG
ACTGTAGAATTAGTGCAAAGAACTTTAAATAAGGCCATTAAATCACAAGACTATCCAGAAGCTGTTATTCTTCATTCTGA
CCAAGGAAGCCAGTATACGAGTCTAGAGTATGAAGAGTTGCTTAAGTTGGACTAA

Upstream 100 bases:

>100_bases
TAGAATTAAAAAGACAACTGGCTAAAGTTAAGGAAGAACGAGACATCTTAAAAAAAGTATTGACCATATTCGCCGAGAAA
AAGAAGTGAGTGCTGCGGAT

Downstream 100 bases:

>100_bases
TGTCAAATATTTAGACACAAAATGAGCTATATTTTCTTAAAATAATTTTCTTCTTTCTGATTTGGAGTTAAACCATTGTT
GGCGGAATGAGGATTATAAT

Product: transposase for insertion sequence element IS981J

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLV
QKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRM
TVELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKLD

Sequences:

>Translated_204_residues
MAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLV
QKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRM
TVELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKLD
>Mature_203_residues
AQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLVQ
KLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRMT
VELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKLD

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=203, Percent_Identity=27.5862068965517, Blast_Score=100, Evalue=1e-21,
Organism=Escherichia coli, GI1788405, Length=201, Percent_Identity=29.8507462686567, Blast_Score=110, Evalue=5e-26,
Organism=Escherichia coli, GI1787263, Length=201, Percent_Identity=29.8507462686567, Blast_Score=110, Evalue=5e-26,
Organism=Escherichia coli, GI1786753, Length=201, Percent_Identity=29.8507462686567, Blast_Score=110, Evalue=5e-26,
Organism=Escherichia coli, GI1786570, Length=201, Percent_Identity=29.8507462686567, Blast_Score=110, Evalue=5e-26,
Organism=Escherichia coli, GI1786490, Length=201, Percent_Identity=29.8507462686567, Blast_Score=110, Evalue=5e-26,
Organism=Escherichia coli, GI1789981, Length=159, Percent_Identity=32.0754716981132, Blast_Score=88, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 23704; Mature: 23573

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYG
CCCHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
APKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKK
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
NKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRMTVELVQRTLNKAIKSQDYPE
CCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
AVILHSDQGSQYTSLEYEELLKLD
EEEEECCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
AQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYG
CCHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
APKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKK
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
NKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRMTVELVQRTLNKAIKSQDYPE
CCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
AVILHSDQGSQYTSLEYEELLKLD
EEEEECCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]