| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is feoB [H]
Identifier: 124485678
GI number: 124485678
Start: 842569
End: 844518
Strand: Reverse
Name: feoB [H]
Synonym: Mlab_0856
Alternate gene names: 124485678
Gene position: 844518-842569 (Counterclockwise)
Preceding gene: 124485679
Following gene: 124485672
Centisome position: 46.79
GC content: 56.21
Gene sequence:
>1950_bases ATGAAAAAAATCACCGTTGCATTAGCCGGCAACCCGAACTGCGGGAAGACGACCCTTTTCAATAACCTCACCGGGATGCG TCACCATGTGGGAAACTGGCCGGGTAAGACCGTCACGATCGAAAAGAAAGAGGGACGGATCGTTTACGACGATACGACAC TCGAGATCGTGGATCTGCCTGGAACCTACAGTCTGAGCGGACGATCGCTCGAAGAAGAGATCGCGGTCGGTTATCTCTTA CACGAAAAACCCGACGTCGTCGTCAACATCGCTGACGCCGCACATCTGGAGAGGAATCTGTACGTCACGCTCCAGCTGAT CGAACTCGGCGTCCCGATGATCCTTGTTTTGAACATGAACCGGTATGCGGACGCGGAAGGCGTCGTCATCAATACAGGTC TTCTCAGCGAAATGCTCGGCATCCCGGTCATACGGATCGAAGCGATCGATGAAACCGGAAAAGACGAGCTCATCAAAGCG ATCCTTGCACGCCCCGCTCCCCCTGAAAAGACCATCCGGTACGACCACGAGCTTGAGGAACATATCGGCGAAGCAACCAA AATCACCGGATCGCGCTGGTCTGCGATCCAGGCTCTTATCCACGGCTCGGCAGAACCCAAAATCGAATCGATCAGGACCC ACCTTGCAGGCATCTACGGGACGAAGCCCGGAGAGATCTTTGCGGATCAGCGGTATGGATTCATCGCCGGTCTTCTGCAC GAGAGCGTGGATCATATGGATGCCGGCGGCAAAAACCAGTCGGAGAGGATCGACAGGCTCGTGACCAGCAGATGGCTCGG GTTCCCGATTTTTCTCGCCGTGATGTATCTGATCTTCCAGATCGTGTTCGCGGTCGGCGCTCCGGTCATGGATCTGATCG ACGAAGGGTTCGGGCTGCTTGGAGAGGCGGCATCGGCGGGTCTTGCCGATATCGCCGCTCCCGACTGGGTCACGTCTCTG GTTTGCGACGGGATCATCGGCGGCGTTGGGTCGGTCGTGATCTTTCTGCCGAATATCTTCCTGTTGTTCCTGCTTCTCGC GATTTTAGAGGATTCGGGATATCTGGCACGGGTTGCCGTTATCATGGACCGGGTCATGCACAAACTTGGTCTGCATGGAA AATCCTTCATCCCGATGATCCTCGGATTCGGGTGCAGCGTGCCGGCAATTATGGCGACCCGGACGCTGGAGACAAAACGC GAACGGTTCTTAACGATCCTGATCACGCCGTTTATGTCCTGCGGGGCACGGCTGCCCGTGTATCTTCTGCTTGTTGGGAT CTTCTTCGCGGCTGAAATCCAGGGGCTCGTGATGTTTTCCCTGTATCTGCTGGGCATTTTCGTGGCGCTGATCACCGGGC TTCTGCTTCGAAAGACGCTCTTTAAGGGCGAGTCTTCGGCTTTCGTTCTGGAGATGCCGCCTTACCGGCTTCCGACAATC AAAGGTGTTTTGATCCATGCCGGAGAGAAGTCCTGGGAGTTTCTGCGCAAAGCCGGGGTGATCATTTTCCCGGCGGTGCT GCTGATGTGGCTGCTTGCTTCTCTGCCGTTCGGCGTCGAGTATGCTTCGGCTGATTCGCTGATAGGTATGGCGGGGTCAA CGATCGCCCCGATCTTTGCACCGCTCGGGTTCGGATTCGCCGAGGCGGGAGTCGCGATCCTGATGGGTCTTCTTGCAAAA GAAGTGGTTGTCGGAGCATTTGGGACGCTTTACGGCGTGGGCGAAGAAGGGCTAGGCGATGTGCTGATGAACGTCTTTAC GCCGCTTTCGGCCTACTCGTTCATGGTGTTCATCCTGCTCTATATGCCCTGTCTTGCGGCGATGTTTACGATCCGGCAGG AGACCCGCTCGTGGAAGATGACGGGGCTTGCGGCAGTAGGCATGTGCGTGATCGCGTGGATCGTTTCCTTCATCGTGTAT CAGGGGGGTGTCCTTCTTGGTTTTGCCTGA
Upstream 100 bases:
>100_bases CCGGCGTCGCCCCGCTTGGAGACCCGATGATGATCTCAGTCAGAGGATGTCAGCTCGCCATACGAAAAGATGATGCCGCA GACATCTGCGTGGCCGCCGT
Downstream 100 bases:
>100_bases AGGATTCTGGACGATCCTTTTTATTTTTATCGCGGCAGGAATCGTTCTTTTGTTTCTGTGGGCGGTGAAGAAGAATCTGC GGGGGGAAGCATGCGGCTGC
Product: hypothetical protein
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 649; Mature: 649
Protein sequence:
>649_residues MKKITVALAGNPNCGKTTLFNNLTGMRHHVGNWPGKTVTIEKKEGRIVYDDTTLEIVDLPGTYSLSGRSLEEEIAVGYLL HEKPDVVVNIADAAHLERNLYVTLQLIELGVPMILVLNMNRYADAEGVVINTGLLSEMLGIPVIRIEAIDETGKDELIKA ILARPAPPEKTIRYDHELEEHIGEATKITGSRWSAIQALIHGSAEPKIESIRTHLAGIYGTKPGEIFADQRYGFIAGLLH ESVDHMDAGGKNQSERIDRLVTSRWLGFPIFLAVMYLIFQIVFAVGAPVMDLIDEGFGLLGEAASAGLADIAAPDWVTSL VCDGIIGGVGSVVIFLPNIFLLFLLLAILEDSGYLARVAVIMDRVMHKLGLHGKSFIPMILGFGCSVPAIMATRTLETKR ERFLTILITPFMSCGARLPVYLLLVGIFFAAEIQGLVMFSLYLLGIFVALITGLLLRKTLFKGESSAFVLEMPPYRLPTI KGVLIHAGEKSWEFLRKAGVIIFPAVLLMWLLASLPFGVEYASADSLIGMAGSTIAPIFAPLGFGFAEAGVAILMGLLAK EVVVGAFGTLYGVGEEGLGDVLMNVFTPLSAYSFMVFILLYMPCLAAMFTIRQETRSWKMTGLAAVGMCVIAWIVSFIVY QGGVLLGFA
Sequences:
>Translated_649_residues MKKITVALAGNPNCGKTTLFNNLTGMRHHVGNWPGKTVTIEKKEGRIVYDDTTLEIVDLPGTYSLSGRSLEEEIAVGYLL HEKPDVVVNIADAAHLERNLYVTLQLIELGVPMILVLNMNRYADAEGVVINTGLLSEMLGIPVIRIEAIDETGKDELIKA ILARPAPPEKTIRYDHELEEHIGEATKITGSRWSAIQALIHGSAEPKIESIRTHLAGIYGTKPGEIFADQRYGFIAGLLH ESVDHMDAGGKNQSERIDRLVTSRWLGFPIFLAVMYLIFQIVFAVGAPVMDLIDEGFGLLGEAASAGLADIAAPDWVTSL VCDGIIGGVGSVVIFLPNIFLLFLLLAILEDSGYLARVAVIMDRVMHKLGLHGKSFIPMILGFGCSVPAIMATRTLETKR ERFLTILITPFMSCGARLPVYLLLVGIFFAAEIQGLVMFSLYLLGIFVALITGLLLRKTLFKGESSAFVLEMPPYRLPTI KGVLIHAGEKSWEFLRKAGVIIFPAVLLMWLLASLPFGVEYASADSLIGMAGSTIAPIFAPLGFGFAEAGVAILMGLLAK EVVVGAFGTLYGVGEEGLGDVLMNVFTPLSAYSFMVFILLYMPCLAAMFTIRQETRSWKMTGLAAVGMCVIAWIVSFIVY QGGVLLGFA >Mature_649_residues MKKITVALAGNPNCGKTTLFNNLTGMRHHVGNWPGKTVTIEKKEGRIVYDDTTLEIVDLPGTYSLSGRSLEEEIAVGYLL HEKPDVVVNIADAAHLERNLYVTLQLIELGVPMILVLNMNRYADAEGVVINTGLLSEMLGIPVIRIEAIDETGKDELIKA ILARPAPPEKTIRYDHELEEHIGEATKITGSRWSAIQALIHGSAEPKIESIRTHLAGIYGTKPGEIFADQRYGFIAGLLH ESVDHMDAGGKNQSERIDRLVTSRWLGFPIFLAVMYLIFQIVFAVGAPVMDLIDEGFGLLGEAASAGLADIAAPDWVTSL VCDGIIGGVGSVVIFLPNIFLLFLLLAILEDSGYLARVAVIMDRVMHKLGLHGKSFIPMILGFGCSVPAIMATRTLETKR ERFLTILITPFMSCGARLPVYLLLVGIFFAAEIQGLVMFSLYLLGIFVALITGLLLRKTLFKGESSAFVLEMPPYRLPTI KGVLIHAGEKSWEFLRKAGVIIFPAVLLMWLLASLPFGVEYASADSLIGMAGSTIAPIFAPLGFGFAEAGVAILMGLLAK EVVVGAFGTLYGVGEEGLGDVLMNVFTPLSAYSFMVFILLYMPCLAAMFTIRQETRSWKMTGLAAVGMCVIAWIVSFIVY QGGVLLGFA
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=719, Percent_Identity=36.0222531293463, Blast_Score=383, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 70447; Mature: 70447
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKITVALAGNPNCGKTTLFNNLTGMRHHVGNWPGKTVTIEKKEGRIVYDDTTLEIVDLP CCEEEEEEECCCCCCCHHHHHCCCHHHHHCCCCCCCEEEEEECCCEEEEECCEEEEEECC GTYSLSGRSLEEEIAVGYLLHEKPDVVVNIADAAHLERNLYVTLQLIELGVPMILVLNMN CCCCCCCCCHHHHHHHHHHEECCCCEEEEEHHHHHHCCCCEEEEEHHHHCCCEEEEEECC RYADAEGVVINTGLLSEMLGIPVIRIEAIDETGKDELIKAILARPAPPEKTIRYDHELEE CCCCCCCEEEEHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHCCCCHHHHH HIGEATKITGSRWSAIQALIHGSAEPKIESIRTHLAGIYGTKPGEIFADQRYGFIAGLLH HCCHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHH ESVDHMDAGGKNQSERIDRLVTSRWLGFPIFLAVMYLIFQIVFAVGAPVMDLIDEGFGLL HHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHH GEAASAGLADIAAPDWVTSLVCDGIIGGVGSVVIFLPNIFLLFLLLAILEDSGYLARVAV HHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH IMDRVMHKLGLHGKSFIPMILGFGCSVPAIMATRTLETKRERFLTILITPFMSCGARLPV HHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH YLLLVGIFFAAEIQGLVMFSLYLLGIFVALITGLLLRKTLFKGESSAFVLEMPPYRLPTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC KGVLIHAGEKSWEFLRKAGVIIFPAVLLMWLLASLPFGVEYASADSLIGMAGSTIAPIFA CEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEECCCCCHHHCCCCHHHHHHH PLGFGFAEAGVAILMGLLAKEVVVGAFGTLYGVGEEGLGDVLMNVFTPLSAYSFMVFILL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YMPCLAAMFTIRQETRSWKMTGLAAVGMCVIAWIVSFIVYQGGVLLGFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC >Mature Secondary Structure MKKITVALAGNPNCGKTTLFNNLTGMRHHVGNWPGKTVTIEKKEGRIVYDDTTLEIVDLP CCEEEEEEECCCCCCCHHHHHCCCHHHHHCCCCCCCEEEEEECCCEEEEECCEEEEEECC GTYSLSGRSLEEEIAVGYLLHEKPDVVVNIADAAHLERNLYVTLQLIELGVPMILVLNMN CCCCCCCCCHHHHHHHHHHEECCCCEEEEEHHHHHHCCCCEEEEEHHHHCCCEEEEEECC RYADAEGVVINTGLLSEMLGIPVIRIEAIDETGKDELIKAILARPAPPEKTIRYDHELEE CCCCCCCEEEEHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHCCCCHHHHH HIGEATKITGSRWSAIQALIHGSAEPKIESIRTHLAGIYGTKPGEIFADQRYGFIAGLLH HCCHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHH ESVDHMDAGGKNQSERIDRLVTSRWLGFPIFLAVMYLIFQIVFAVGAPVMDLIDEGFGLL HHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHH GEAASAGLADIAAPDWVTSLVCDGIIGGVGSVVIFLPNIFLLFLLLAILEDSGYLARVAV HHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH IMDRVMHKLGLHGKSFIPMILGFGCSVPAIMATRTLETKRERFLTILITPFMSCGARLPV HHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH YLLLVGIFFAAEIQGLVMFSLYLLGIFVALITGLLLRKTLFKGESSAFVLEMPPYRLPTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC KGVLIHAGEKSWEFLRKAGVIIFPAVLLMWLLASLPFGVEYASADSLIGMAGSTIAPIFA CEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEECCCCCHHHCCCCHHHHHHH PLGFGFAEAGVAILMGLLAKEVVVGAFGTLYGVGEEGLGDVLMNVFTPLSAYSFMVFILL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YMPCLAAMFTIRQETRSWKMTGLAAVGMCVIAWIVSFIVYQGGVLLGFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA