| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485658
Identifier: 124485658
GI number: 124485658
Start: 814722
End: 815162
Strand: Reverse
Name: 124485658
Synonym: Mlab_0836
Alternate gene names: NA
Gene position: 815162-814722 (Counterclockwise)
Preceding gene: 124485660
Following gene: 124485650
Centisome position: 45.16
GC content: 47.85
Gene sequence:
>441_bases GTGACAGTGGCAACGTTCCTTGATGTCTTTTGGGACTATTTTTCCGGAAAGACCCTTCCTGCTCCGACACTGATAGGTTT TGCTTTAGGTTTGGCCATCGCGATTCTTTTGACCATCATCGTAAGTATGTTCATCCTCAATACCTACAGCGGCGGCGCAT ATATCATAAAAATCGTAGGACTGACCGCAAGCTCCGATGATCAGCAGATCGAACTCGAGCTCGTAAGCGGCAAGGATATG GCAGGTCTTGTACTGCTGGACGTTTATATCAACGGAATTAAGGCCGAACCGGTCAATCTGCCGGAAACCTACAGTCCGGG AATCAGAATCACCTATAAAATTCCTCCAAATATAGGCGATACGATATACTCGGTGATAGTTGTCGGGACGTTTAAAGACG GCGTCGTCGCCGACCTGTATAACTCCACAACGGCAGGGTAA
Upstream 100 bases:
>100_bases TTTGCATGATAAGGGAAGCGGAATACCCATTCGTACCTGATATTTCGCGGAATCGAAAGTGTCTGTAAGAGAATGTTTAT AGTTAATTAACTCCAATTCC
Downstream 100 bases:
>100_bases GGGGTTCCACCCTCATCTCAAATTTCCAGGATCACTTCTCTTTTATTTTGCGAAACGTCCCGTCAGCGGCATACTCTGCG AGGGATCCGTCCTCCATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTVATFLDVFWDYFSGKTLPAPTLIGFALGLAIAILLTIIVSMFILNTYSGGAYIIKIVGLTASSDDQQIELELVSGKDM AGLVLLDVYINGIKAEPVNLPETYSPGIRITYKIPPNIGDTIYSVIVVGTFKDGVVADLYNSTTAG
Sequences:
>Translated_146_residues MTVATFLDVFWDYFSGKTLPAPTLIGFALGLAIAILLTIIVSMFILNTYSGGAYIIKIVGLTASSDDQQIELELVSGKDM AGLVLLDVYINGIKAEPVNLPETYSPGIRITYKIPPNIGDTIYSVIVVGTFKDGVVADLYNSTTAG >Mature_145_residues TVATFLDVFWDYFSGKTLPAPTLIGFALGLAIAILLTIIVSMFILNTYSGGAYIIKIVGLTASSDDQQIELELVSGKDMA GLVLLDVYINGIKAEPVNLPETYSPGIRITYKIPPNIGDTIYSVIVVGTFKDGVVADLYNSTTAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15585; Mature: 15454
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVATFLDVFWDYFSGKTLPAPTLIGFALGLAIAILLTIIVSMFILNTYSGGAYIIKIVG CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE LTASSDDQQIELELVSGKDMAGLVLLDVYINGIKAEPVNLPETYSPGIRITYKIPPNIGD EECCCCCCEEEEEEECCCCCCHHEEEEEECCCEECCCCCCCCCCCCCEEEEEEECCCCCH TIYSVIVVGTFKDGVVADLYNSTTAG HEEEEEEEECCCCCEEEHHCCCCCCC >Mature Secondary Structure TVATFLDVFWDYFSGKTLPAPTLIGFALGLAIAILLTIIVSMFILNTYSGGAYIIKIVG HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE LTASSDDQQIELELVSGKDMAGLVLLDVYINGIKAEPVNLPETYSPGIRITYKIPPNIGD EECCCCCCEEEEEEECCCCCCHHEEEEEECCCEECCCCCCCCCCCCCEEEEEEECCCCCH TIYSVIVVGTFKDGVVADLYNSTTAG HEEEEEEEECCCCCEEEHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA