| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485633
Identifier: 124485633
GI number: 124485633
Start: 791440
End: 792645
Strand: Reverse
Name: 124485633
Synonym: Mlab_0811
Alternate gene names: NA
Gene position: 792645-791440 (Counterclockwise)
Preceding gene: 124485634
Following gene: 124485630
Centisome position: 43.91
GC content: 54.31
Gene sequence:
>1206_bases ATGCAGAGCCTTCGCGTTTGCTGGTATAAGAGCGTGTATATGACCGCACGTTTCCTTGCCAGTCCGGCCATTGGACGGAA ATTACAGTATACCTACGATATCGTTATTCCAAAGCATACCCCCTATATGGTCTTCTCCAACCACACAACCCTCTGGGACC ACCTGATGATCGGCATGGCGGTCAAAGGGCACATGTTCTATGTGGCCGGCGAACATCTTTTCAGAAAAAAATCGACACGG TTTATCGGAGCGTTTCTGCTCGATCCGATCATCCGCAAAAAAGGAGCCCCGGCTGGTGAAGTCATCCGCGATATCAAAGA GCGGCTCGGTGCGGGAAATAACGTCTGGATGTCTCCCGAAGGGGTCAGATCGATCAACGGCGAGACGGCGTTCATCTCGC CGGGGACAGGAAAACTGGTCAAGGAGTGCGGAGAGCTCGGCGCCGCTCTCATAACCTACCGGATGCACGGCGGATATCTG CGCCGCCCAAGATGGGGCAAGACGCCGCGTGACGGCAAGATGTGGGGGGAGTTCGTGCACGAATACTCGCCGGATGAATT GAAGGGCATGACAGTCGATCAGATCAACGAGGCGATCAACCGCGATCTGTATGTGAATACCTTCGACGACCAGAAAAAGA ACCCGCTTCCCTACACAGGGACGGATCTTGCCGAATATCTGGAGACGATCCTCTACATCTGCCCGGAGTGTAAGCAGATG GGCAAACTTCACAGCAAAGGGGATATTCTTTCCTGCGAATGCGGCTACTCGGTGAAGTTCAACGAGTTCGGTCTGTTCGA GCCGGCGTCGGGTCATCCGCTGCACCACGACAATATCGTGTCCTGGGATCACTGGCAGCGTGATCTGATCAAGGAGAGTC TGCCGGCGTATCTGACAACCCCGAAAGATGTCCCGATCGAATCGGACGAGGGACAGATCCTTGGAAAGATCGGAGCGCTG AAGTCGGTGGAGGATCTCGGCACCGGCAAATTTTCGATCTATGTGGACAGACTCGAGTTCGACGGGGACAAGGGGAAGTT CGTGTTCCCGTTCGCGGATATCGAAGGGTTCGCGTTTTCCCTGCAGATGAAGATCCTTTTCTCGCTGCACGACGGGACGT ATTACGAGGTCGAGTCGAAGATCCCGCGGTCGGCGGCAAAATACATGGTGCTTTACCGGTTTTTGATCGGGAAAGAGTAT AAGTAG
Upstream 100 bases:
>100_bases TCTTCTTTTTTATCCGAATACGCCCGGAGAAAAGCTAACTCCATTTTCCTTTTGTTGTACCCTCAGCTATATCATGGGTA AATTCCTATAATATAGGTCA
Downstream 100 bases:
>100_bases ATATTTTCTCTTTTTTTCATTCCTCTACAATTGCCGGAATATCAGGCGAATCCGGTGCGAAAAACATGCTCCCCCACCCA AGCCCCCAGCCGTCTTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Phospholipid/Glycerol Acyltransferase
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MQSLRVCWYKSVYMTARFLASPAIGRKLQYTYDIVIPKHTPYMVFSNHTTLWDHLMIGMAVKGHMFYVAGEHLFRKKSTR FIGAFLLDPIIRKKGAPAGEVIRDIKERLGAGNNVWMSPEGVRSINGETAFISPGTGKLVKECGELGAALITYRMHGGYL RRPRWGKTPRDGKMWGEFVHEYSPDELKGMTVDQINEAINRDLYVNTFDDQKKNPLPYTGTDLAEYLETILYICPECKQM GKLHSKGDILSCECGYSVKFNEFGLFEPASGHPLHHDNIVSWDHWQRDLIKESLPAYLTTPKDVPIESDEGQILGKIGAL KSVEDLGTGKFSIYVDRLEFDGDKGKFVFPFADIEGFAFSLQMKILFSLHDGTYYEVESKIPRSAAKYMVLYRFLIGKEY K
Sequences:
>Translated_401_residues MQSLRVCWYKSVYMTARFLASPAIGRKLQYTYDIVIPKHTPYMVFSNHTTLWDHLMIGMAVKGHMFYVAGEHLFRKKSTR FIGAFLLDPIIRKKGAPAGEVIRDIKERLGAGNNVWMSPEGVRSINGETAFISPGTGKLVKECGELGAALITYRMHGGYL RRPRWGKTPRDGKMWGEFVHEYSPDELKGMTVDQINEAINRDLYVNTFDDQKKNPLPYTGTDLAEYLETILYICPECKQM GKLHSKGDILSCECGYSVKFNEFGLFEPASGHPLHHDNIVSWDHWQRDLIKESLPAYLTTPKDVPIESDEGQILGKIGAL KSVEDLGTGKFSIYVDRLEFDGDKGKFVFPFADIEGFAFSLQMKILFSLHDGTYYEVESKIPRSAAKYMVLYRFLIGKEY K >Mature_401_residues MQSLRVCWYKSVYMTARFLASPAIGRKLQYTYDIVIPKHTPYMVFSNHTTLWDHLMIGMAVKGHMFYVAGEHLFRKKSTR FIGAFLLDPIIRKKGAPAGEVIRDIKERLGAGNNVWMSPEGVRSINGETAFISPGTGKLVKECGELGAALITYRMHGGYL RRPRWGKTPRDGKMWGEFVHEYSPDELKGMTVDQINEAINRDLYVNTFDDQKKNPLPYTGTDLAEYLETILYICPECKQM GKLHSKGDILSCECGYSVKFNEFGLFEPASGHPLHHDNIVSWDHWQRDLIKESLPAYLTTPKDVPIESDEGQILGKIGAL KSVEDLGTGKFSIYVDRLEFDGDKGKFVFPFADIEGFAFSLQMKILFSLHDGTYYEVESKIPRSAAKYMVLYRFLIGKEY K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45666; Mature: 45666
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSLRVCWYKSVYMTARFLASPAIGRKLQYTYDIVIPKHTPYMVFSNHTTLWDHLMIGMA CCCCEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHE VKGHMFYVAGEHLFRKKSTRFIGAFLLDPIIRKKGAPAGEVIRDIKERLGAGNNVWMSPE ECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCC GVRSINGETAFISPGTGKLVKECGELGAALITYRMHGGYLRRPRWGKTPRDGKMWGEFVH CCCCCCCCEEEECCCCCHHHHHHHHHHHEEEEEEECCCEECCCCCCCCCCCCHHHHHHHH EYSPDELKGMTVDQINEAINRDLYVNTFDDQKKNPLPYTGTDLAEYLETILYICPECKQM HCCCHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHH GKLHSKGDILSCECGYSVKFNEFGLFEPASGHPLHHDNIVSWDHWQRDLIKESLPAYLTT HCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEC PKDVPIESDEGQILGKIGALKSVEDLGTGKFSIYVDRLEFDGDKGKFVFPFADIEGFAFS CCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEEEECCCCCEEEE LQMKILFSLHDGTYYEVESKIPRSAAKYMVLYRFLIGKEYK EEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQSLRVCWYKSVYMTARFLASPAIGRKLQYTYDIVIPKHTPYMVFSNHTTLWDHLMIGMA CCCCEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHE VKGHMFYVAGEHLFRKKSTRFIGAFLLDPIIRKKGAPAGEVIRDIKERLGAGNNVWMSPE ECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCC GVRSINGETAFISPGTGKLVKECGELGAALITYRMHGGYLRRPRWGKTPRDGKMWGEFVH CCCCCCCCEEEECCCCCHHHHHHHHHHHEEEEEEECCCEECCCCCCCCCCCCHHHHHHHH EYSPDELKGMTVDQINEAINRDLYVNTFDDQKKNPLPYTGTDLAEYLETILYICPECKQM HCCCHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHH GKLHSKGDILSCECGYSVKFNEFGLFEPASGHPLHHDNIVSWDHWQRDLIKESLPAYLTT HCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEC PKDVPIESDEGQILGKIGALKSVEDLGTGKFSIYVDRLEFDGDKGKFVFPFADIEGFAFS CCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEEEECCCCCEEEE LQMKILFSLHDGTYYEVESKIPRSAAKYMVLYRFLIGKEYK EEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA