| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485629
Identifier: 124485629
GI number: 124485629
Start: 788622
End: 789125
Strand: Reverse
Name: 124485629
Synonym: Mlab_0807
Alternate gene names: NA
Gene position: 789125-788622 (Counterclockwise)
Preceding gene: 124485630
Following gene: 124485626
Centisome position: 43.72
GC content: 38.89
Gene sequence:
>504_bases ATGAATTTCGATAAAAATCTCTTAATGACGTATAAGAAATTAGTACAGACAATGGAACTGGAAAAAAGCTATCAGGAGTT TCTCAGACTCTTTCGGTTTTTACGGATCGAGCTGGAAAAAGAGATACCTGACTATCGGTTTCAGGGAAATATTGTAGAGA ACGGTATGGATTATTCCTATTTTCAGTTTACCAACGATACGCTGAAAAAGAAAGGATTGAAAATTGCGGTTACTTTTGTC CACAGAAATTTCCAATTCGAAGTCTGGCTTTCCGGATTCAACCGTAAATTTCAATGCAGATATTATGAACTGCTGAAAGA TACGAAACAGCCCTTTTTCCTGACCGAGGATCCCAAGAGAAGTGATTACATTTTGAGAATTCCCCTGGATCAGAGTATGG ATATATCCGATGGAGGGCGGGTTCTTTTAGAAATTAAGGAGGCTTCATTACGGCTTTTGGCATATATTGAGGGCGTTGAA GCGACGCAGAGTGATTTTGATTGA
Upstream 100 bases:
>100_bases TAATCGGCGGGCTGAGATGTGTTCTAGCAAATCAGAGTTAAGTGTTATAATAGTACAAAGAGATATAGCTATAAATCGAA TTTTTTGGAGGGAAGAGGGA
Downstream 100 bases:
>100_bases AGATTTCCTGTGAGAATACTGCGTTCTACCTTCTCTGTTTCGTTCTATAAAGATTGAATGAGGCTTGTAAAGAATACAAA TATTATTTGGAATAACCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MNFDKNLLMTYKKLVQTMELEKSYQEFLRLFRFLRIELEKEIPDYRFQGNIVENGMDYSYFQFTNDTLKKKGLKIAVTFV HRNFQFEVWLSGFNRKFQCRYYELLKDTKQPFFLTEDPKRSDYILRIPLDQSMDISDGGRVLLEIKEASLRLLAYIEGVE ATQSDFD
Sequences:
>Translated_167_residues MNFDKNLLMTYKKLVQTMELEKSYQEFLRLFRFLRIELEKEIPDYRFQGNIVENGMDYSYFQFTNDTLKKKGLKIAVTFV HRNFQFEVWLSGFNRKFQCRYYELLKDTKQPFFLTEDPKRSDYILRIPLDQSMDISDGGRVLLEIKEASLRLLAYIEGVE ATQSDFD >Mature_167_residues MNFDKNLLMTYKKLVQTMELEKSYQEFLRLFRFLRIELEKEIPDYRFQGNIVENGMDYSYFQFTNDTLKKKGLKIAVTFV HRNFQFEVWLSGFNRKFQCRYYELLKDTKQPFFLTEDPKRSDYILRIPLDQSMDISDGGRVLLEIKEASLRLLAYIEGVE ATQSDFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20096; Mature: 20096
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFDKNLLMTYKKLVQTMELEKSYQEFLRLFRFLRIELEKEIPDYRFQGNIVENGMDYSY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCEE FQFTNDTLKKKGLKIAVTFVHRNFQFEVWLSGFNRKFQCRYYELLKDTKQPFFLTEDPKR EEECCHHHHHCCCEEEEEEEECCEEEEEEEECCCCEEEHHHHHHHHHCCCCEEEECCCCC SDYILRIPLDQSMDISDGGRVLLEIKEASLRLLAYIEGVEATQSDFD CCEEEEECCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNFDKNLLMTYKKLVQTMELEKSYQEFLRLFRFLRIELEKEIPDYRFQGNIVENGMDYSY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCEE FQFTNDTLKKKGLKIAVTFVHRNFQFEVWLSGFNRKFQCRYYELLKDTKQPFFLTEDPKR EEECCHHHHHCCCEEEEEEEECCEEEEEEEECCCCEEEHHHHHHHHHCCCCEEEECCCCC SDYILRIPLDQSMDISDGGRVLLEIKEASLRLLAYIEGVEATQSDFD CCEEEEECCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA