Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485629

Identifier: 124485629

GI number: 124485629

Start: 788622

End: 789125

Strand: Reverse

Name: 124485629

Synonym: Mlab_0807

Alternate gene names: NA

Gene position: 789125-788622 (Counterclockwise)

Preceding gene: 124485630

Following gene: 124485626

Centisome position: 43.72

GC content: 38.89

Gene sequence:

>504_bases
ATGAATTTCGATAAAAATCTCTTAATGACGTATAAGAAATTAGTACAGACAATGGAACTGGAAAAAAGCTATCAGGAGTT
TCTCAGACTCTTTCGGTTTTTACGGATCGAGCTGGAAAAAGAGATACCTGACTATCGGTTTCAGGGAAATATTGTAGAGA
ACGGTATGGATTATTCCTATTTTCAGTTTACCAACGATACGCTGAAAAAGAAAGGATTGAAAATTGCGGTTACTTTTGTC
CACAGAAATTTCCAATTCGAAGTCTGGCTTTCCGGATTCAACCGTAAATTTCAATGCAGATATTATGAACTGCTGAAAGA
TACGAAACAGCCCTTTTTCCTGACCGAGGATCCCAAGAGAAGTGATTACATTTTGAGAATTCCCCTGGATCAGAGTATGG
ATATATCCGATGGAGGGCGGGTTCTTTTAGAAATTAAGGAGGCTTCATTACGGCTTTTGGCATATATTGAGGGCGTTGAA
GCGACGCAGAGTGATTTTGATTGA

Upstream 100 bases:

>100_bases
TAATCGGCGGGCTGAGATGTGTTCTAGCAAATCAGAGTTAAGTGTTATAATAGTACAAAGAGATATAGCTATAAATCGAA
TTTTTTGGAGGGAAGAGGGA

Downstream 100 bases:

>100_bases
AGATTTCCTGTGAGAATACTGCGTTCTACCTTCTCTGTTTCGTTCTATAAAGATTGAATGAGGCTTGTAAAGAATACAAA
TATTATTTGGAATAACCACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNFDKNLLMTYKKLVQTMELEKSYQEFLRLFRFLRIELEKEIPDYRFQGNIVENGMDYSYFQFTNDTLKKKGLKIAVTFV
HRNFQFEVWLSGFNRKFQCRYYELLKDTKQPFFLTEDPKRSDYILRIPLDQSMDISDGGRVLLEIKEASLRLLAYIEGVE
ATQSDFD

Sequences:

>Translated_167_residues
MNFDKNLLMTYKKLVQTMELEKSYQEFLRLFRFLRIELEKEIPDYRFQGNIVENGMDYSYFQFTNDTLKKKGLKIAVTFV
HRNFQFEVWLSGFNRKFQCRYYELLKDTKQPFFLTEDPKRSDYILRIPLDQSMDISDGGRVLLEIKEASLRLLAYIEGVE
ATQSDFD
>Mature_167_residues
MNFDKNLLMTYKKLVQTMELEKSYQEFLRLFRFLRIELEKEIPDYRFQGNIVENGMDYSYFQFTNDTLKKKGLKIAVTFV
HRNFQFEVWLSGFNRKFQCRYYELLKDTKQPFFLTEDPKRSDYILRIPLDQSMDISDGGRVLLEIKEASLRLLAYIEGVE
ATQSDFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20096; Mature: 20096

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFDKNLLMTYKKLVQTMELEKSYQEFLRLFRFLRIELEKEIPDYRFQGNIVENGMDYSY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCEE
FQFTNDTLKKKGLKIAVTFVHRNFQFEVWLSGFNRKFQCRYYELLKDTKQPFFLTEDPKR
EEECCHHHHHCCCEEEEEEEECCEEEEEEEECCCCEEEHHHHHHHHHCCCCEEEECCCCC
SDYILRIPLDQSMDISDGGRVLLEIKEASLRLLAYIEGVEATQSDFD
CCEEEEECCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNFDKNLLMTYKKLVQTMELEKSYQEFLRLFRFLRIELEKEIPDYRFQGNIVENGMDYSY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCEE
FQFTNDTLKKKGLKIAVTFVHRNFQFEVWLSGFNRKFQCRYYELLKDTKQPFFLTEDPKR
EEECCHHHHHCCCEEEEEEEECCEEEEEEEECCCCEEEHHHHHHHHHCCCCEEEECCCCC
SDYILRIPLDQSMDISDGGRVLLEIKEASLRLLAYIEGVEATQSDFD
CCEEEEECCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA