| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485413
Identifier: 124485413
GI number: 124485413
Start: 559259
End: 559504
Strand: Reverse
Name: 124485413
Synonym: Mlab_0588
Alternate gene names: NA
Gene position: 559504-559259 (Counterclockwise)
Preceding gene: 124485414
Following gene: 124485412
Centisome position: 31.0
GC content: 47.97
Gene sequence:
>246_bases ATGGTACTCGAAACATTTCATCGGTCCCAGACCGACAAACTTCTTGGCGGCGTCTGCGGAGGGGTTGCTGAATATATTAA TGCCCCAACGTGGCTTGTCAGGCTGATCTGGGTAGTTCTGACGTTCATCCCGTACCTGACCGTCCCAAGTATTTTGATCT ACATTCTGATGTGGATTTTTGTCCCGCTTGGTCCAAAAGCCCTTGATCCAAATGTGATCGACGCAGAGTTCGAAGTAAAG GAATAA
Upstream 100 bases:
>100_bases GACGGGGCGGAAAACACGATGGAGATCTTTACCGTGAAAAAGAGTCCACGCTGCCCGATGTGCGCAACCTTATAGGTTCC CAGAAAAAACATATAGAGTA
Downstream 100 bases:
>100_bases TCATGCGCCCGCCTGAGGATCCAGAGGATCTGACAGATCCGCCGTTTTATCTGCCGCAGTTCGAGGAGGCATATCAGTAC ATCATTAATGAATATTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MVLETFHRSQTDKLLGGVCGGVAEYINAPTWLVRLIWVVLTFIPYLTVPSILIYILMWIFVPLGPKALDPNVIDAEFEVK E
Sequences:
>Translated_81_residues MVLETFHRSQTDKLLGGVCGGVAEYINAPTWLVRLIWVVLTFIPYLTVPSILIYILMWIFVPLGPKALDPNVIDAEFEVK E >Mature_81_residues MVLETFHRSQTDKLLGGVCGGVAEYINAPTWLVRLIWVVLTFIPYLTVPSILIYILMWIFVPLGPKALDPNVIDAEFEVK E
Specific function: Unknown
COG id: COG1983
COG function: function code KT; Putative stress-responsive transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9175; Mature: 9175
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLETFHRSQTDKLLGGVCGGVAEYINAPTWLVRLIWVVLTFIPYLTVPSILIYILMWIF CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPLGPKALDPNVIDAEFEVKE HCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVLETFHRSQTDKLLGGVCGGVAEYINAPTWLVRLIWVVLTFIPYLTVPSILIYILMWIF CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPLGPKALDPNVIDAEFEVKE HCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA