Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is exoA [H]
Identifier: 124265797
GI number: 124265797
Start: 635828
End: 636850
Strand: Direct
Name: exoA [H]
Synonym: Mpe_A0604
Alternate gene names: 124265797
Gene position: 635828-636850 (Clockwise)
Preceding gene: 124265796
Following gene: 124265798
Centisome position: 15.72
GC content: 72.04
Gene sequence:
>1023_bases ATGACCCAACGCCGCATCAGCGTGATCGCCCCCTGCCGCAACGAGCAGGCGCATGTGGTGGCCTTCTGCGACGCGGTGGC CGCGCAGGCGCTGCCGGAGGGTGTGGCGCTCGAGGTGCTGGTGGCCGACGGCATGAGCGACGACGGCACGCGCGAGCTGC TGGCACAGCGCTGCGCGGCCGACCCGCGCTTCGCGATGATCGACAACCCGCGGCGCATCGTCTCGAGCGGGTTGAACCGC TGCATCGAGCGCGCACGCGGCGAGGTCATCGTCCGCATGGACCTCCACACCCGGTACGAAAGCGACTACATCGTCGAGTG CCTGGCCGCGCTGGAGCGCACCGGCGCGGCCAATGTCGGCGGGCCGTGGCGTGCCGAAGGCGAGGGCGCCACCCAGGAGG CCATCGCCGCGGCCTTCCAGTCGCGCTGGGTCACGGGCGGCGCGCGTTCGCGCGCGCTCGACCACGAAGGCCCGGTCGAC ACCGTCTACCTCGGTTGCTGGCCGCGTGCCACCTTCGACCGCTACGGCCTGTTCGACGAGGACCTGGTGCGCAACCAGGA CGACGAGCACAACCTGCGTCTCACGCGTCGCGGCGCGGTGGTCTGGCAGAGCGCGCGCATCGTGTCGGTCTACCGCCCGC GCGAGACGCTGGCCCAGCTGTTCCGCCAGCAGCTGCAGTACGGCTACTGGAAGCCCTTCGTGATGCGCAAGCACGGGCAG GCGGCGGCATTGCGCCAGCTGGCACCGGGCGCCTTCGTCGCGGCGCTGGCGCTGTCGCTGCTGCTCGGCCTGGTGTGGCC GGCCGCCGGCCGCGGTGCCGTGCTGCTGGGCAACCTGTACGGCGTGTACGTGCTGGCTGCGTCGCTGGCCATCGCGCGCG ACGAGGGCTACGAGCTCCTGCTGCGCCTGCCGCTGGTGATCGTGACGTACCACGCGGGCTACGGACTGGGCACCTTGTGC GGCTGGTTCGACGTGCTGCGCGGCCGCTCGCCGTCGCCTGCCTTCGGCACGCTGACCCGATGA
Upstream 100 bases:
>100_bases CGCCGGGTGCAGATGGACCGCATGGCGACGCTCTACGAATCGCTGCGCCCGCGGGTGGCGGTACCCGTCGCGTGAGCCGG ATGAACCGAGAGGCCTTGCC
Downstream 100 bases:
>100_bases GCCGGCCGGCCGCGCCAGACGACGAGGCTCGCGCGGTCGCCGAGCGCTATGCCCGCCGCGACGCGCAGGCCGATGCGCGG CGCTACGGCCTGTTCGACGC
Product: putative glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTQRRISVIAPCRNEQAHVVAFCDAVAAQALPEGVALEVLVADGMSDDGTRELLAQRCAADPRFAMIDNPRRIVSSGLNR CIERARGEVIVRMDLHTRYESDYIVECLAALERTGAANVGGPWRAEGEGATQEAIAAAFQSRWVTGGARSRALDHEGPVD TVYLGCWPRATFDRYGLFDEDLVRNQDDEHNLRLTRRGAVVWQSARIVSVYRPRETLAQLFRQQLQYGYWKPFVMRKHGQ AAALRQLAPGAFVAALALSLLLGLVWPAAGRGAVLLGNLYGVYVLAASLAIARDEGYELLLRLPLVIVTYHAGYGLGTLC GWFDVLRGRSPSPAFGTLTR
Sequences:
>Translated_340_residues MTQRRISVIAPCRNEQAHVVAFCDAVAAQALPEGVALEVLVADGMSDDGTRELLAQRCAADPRFAMIDNPRRIVSSGLNR CIERARGEVIVRMDLHTRYESDYIVECLAALERTGAANVGGPWRAEGEGATQEAIAAAFQSRWVTGGARSRALDHEGPVD TVYLGCWPRATFDRYGLFDEDLVRNQDDEHNLRLTRRGAVVWQSARIVSVYRPRETLAQLFRQQLQYGYWKPFVMRKHGQ AAALRQLAPGAFVAALALSLLLGLVWPAAGRGAVLLGNLYGVYVLAASLAIARDEGYELLLRLPLVIVTYHAGYGLGTLC GWFDVLRGRSPSPAFGTLTR >Mature_339_residues TQRRISVIAPCRNEQAHVVAFCDAVAAQALPEGVALEVLVADGMSDDGTRELLAQRCAADPRFAMIDNPRRIVSSGLNRC IERARGEVIVRMDLHTRYESDYIVECLAALERTGAANVGGPWRAEGEGATQEAIAAAFQSRWVTGGARSRALDHEGPVDT VYLGCWPRATFDRYGLFDEDLVRNQDDEHNLRLTRRGAVVWQSARIVSVYRPRETLAQLFRQQLQYGYWKPFVMRKHGQA AALRQLAPGAFVAALALSLLLGLVWPAAGRGAVLLGNLYGVYVLAASLAIARDEGYELLLRLPLVIVTYHAGYGLGTLCG WFDVLRGRSPSPAFGTLTR
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the second sugar (glucose). Catalyzes the formation of a beta-1,3 linkage with the galactose lipid carrier [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 37367; Mature: 37236
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRRISVIAPCRNEQAHVVAFCDAVAAQALPEGVALEVLVADGMSDDGTRELLAQRCAA CCCCCEEEEECCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCC DPRFAMIDNPRRIVSSGLNRCIERARGEVIVRMDLHTRYESDYIVECLAALERTGAANVG CCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC GPWRAEGEGATQEAIAAAFQSRWVTGGARSRALDHEGPVDTVYLGCWPRATFDRYGLFDE CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEECCCCCCHHHCCCCCH DLVRNQDDEHNLRLTRRGAVVWQSARIVSVYRPRETLAQLFRQQLQYGYWKPFVMRKHGQ HHHCCCCCCCCEEEEECCCEEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCHHEECCCH AAALRQLAPGAFVAALALSLLLGLVWPAAGRGAVLLGNLYGVYVLAASLAIARDEGYELL HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHH LRLPLVIVTYHAGYGLGTLCGWFDVLRGRSPSPAFGTLTR HHHHHHHEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TQRRISVIAPCRNEQAHVVAFCDAVAAQALPEGVALEVLVADGMSDDGTRELLAQRCAA CCCCEEEEECCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCC DPRFAMIDNPRRIVSSGLNRCIERARGEVIVRMDLHTRYESDYIVECLAALERTGAANVG CCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC GPWRAEGEGATQEAIAAAFQSRWVTGGARSRALDHEGPVDTVYLGCWPRATFDRYGLFDE CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEECCCCCCHHHCCCCCH DLVRNQDDEHNLRLTRRGAVVWQSARIVSVYRPRETLAQLFRQQLQYGYWKPFVMRKHGQ HHHCCCCCCCCEEEEECCCEEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCHHEECCCH AAALRQLAPGAFVAALALSLLLGLVWPAAGRGAVLLGNLYGVYVLAASLAIARDEGYELL HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHH LRLPLVIVTYHAGYGLGTLCGWFDVLRGRSPSPAFGTLTR HHHHHHHEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]