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The map label for this gene is fliN [H]

Identifier: 124265766

GI number: 124265766

Start: 605495

End: 605923

Strand: Direct

Name: fliN [H]

Synonym: Mpe_A0573

Alternate gene names: 124265766

Gene position: 605495-605923 (Clockwise)

Preceding gene: 124265765

Following gene: 124265767

Centisome position: 14.97

GC content: 69.46

Gene sequence:

>429_bases
ATGGCTGATGCCGCACCGAACGACGAACAGGACGCGATGGCCGCCGAGTGGGCCGCCGCGCTCGAGCAACAGTCGCCCGG
CAGCGAGGTCGTCACGACGGCCGAGCAGGTGGCGCCGGCGTCGTTCGCCAACTTCGCGCCCACCCCGGGAGGCGGCGCGG
GCAACGACATCAACATGATCCTCGACATCCCGGTGCAGCTCACCGTGGAGCTGGGCCGCACACGCATCCCGATCAAGCAC
ATCCTGCAGCTGGCGCAGGGCTCGGTGGTCGAGCTCGACGCGCTGGCCGGCGAGCCGATGGACGTGCTGGTCAACGGCTA
CCTGATCGCCCAGGGCGAGGTGGTGGTGGTGAACGACAAGTTCGGCATTCGCTTGACCGACATCGTGACGCCCAGCGAGC
GCATGCGCCGGCTGAGCCGCGGCGGCTGA

Upstream 100 bases:

>100_bases
CCGGTGTTCGACTGCCACTACGGCACGAGCAACGGCAAGTACGCCATCAAGATCGATCAACTGCTGACGAACCAGGGCCC
GTCCTGGCTGGGAGAACACC

Downstream 100 bases:

>100_bases
TCCGGCCCTCCGGAAGGCGCGCGACATCATGTCCGGTTCCCTGGGCTTCGGCCTGTTGTGGTTCGTCGTCATCGTGGCGG
CCATCCCGCTGGCGCTGTGG

Product: flagellar motor switch protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MADAAPNDEQDAMAAEWAAALEQQSPGSEVVTTAEQVAPASFANFAPTPGGGAGNDINMILDIPVQLTVELGRTRIPIKH
ILQLAQGSVVELDALAGEPMDVLVNGYLIAQGEVVVVNDKFGIRLTDIVTPSERMRRLSRGG

Sequences:

>Translated_142_residues
MADAAPNDEQDAMAAEWAAALEQQSPGSEVVTTAEQVAPASFANFAPTPGGGAGNDINMILDIPVQLTVELGRTRIPIKH
ILQLAQGSVVELDALAGEPMDVLVNGYLIAQGEVVVVNDKFGIRLTDIVTPSERMRRLSRGG
>Mature_141_residues
ADAAPNDEQDAMAAEWAAALEQQSPGSEVVTTAEQVAPASFANFAPTPGGGAGNDINMILDIPVQLTVELGRTRIPIKHI
LQLAQGSVVELDALAGEPMDVLVNGYLIAQGEVVVVNDKFGIRLTDIVTPSERMRRLSRGG

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=134, Percent_Identity=58.2089552238806, Blast_Score=157, Evalue=4e-40,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 14949; Mature: 14818

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADAAPNDEQDAMAAEWAAALEQQSPGSEVVTTAEQVAPASFANFAPTPGGGAGNDINMI
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE
LDIPVQLTVELGRTRIPIKHILQLAQGSVVELDALAGEPMDVLVNGYLIAQGEVVVVNDK
EECCEEEEEECCCCCCCHHHHHHHHCCCEEEEHHHCCCCCEEEEECEEEECCCEEEEECC
FGIRLTDIVTPSERMRRLSRGG
CCEEEEEEECCHHHHHHHHCCC
>Mature Secondary Structure 
ADAAPNDEQDAMAAEWAAALEQQSPGSEVVTTAEQVAPASFANFAPTPGGGAGNDINMI
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE
LDIPVQLTVELGRTRIPIKHILQLAQGSVVELDALAGEPMDVLVNGYLIAQGEVVVVNDK
EECCEEEEEECCCCCCCHHHHHHHHCCCEEEEHHHCCCCCEEEEECEEEECCCEEEEECC
FGIRLTDIVTPSERMRRLSRGG
CCEEEEEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2651416; 9097040; 9278503 [H]