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The map label for this gene is ygcF [C]

Identifier: 124265719

GI number: 124265719

Start: 563224

End: 563859

Strand: Direct

Name: ygcF [C]

Synonym: Mpe_A0526

Alternate gene names: 124265719

Gene position: 563224-563859 (Clockwise)

Preceding gene: 124265718

Following gene: 124265720

Centisome position: 13.93

GC content: 67.92

Gene sequence:

>636_bases
ATGACTTACTCGGTCAAGGAAGTCTTCTATACCCTTCAGGGAGAAGGCAGCCATGCCGGCCGCCCGGCGGTGTTCTGCCG
CTTCGCCGGCTGCAACCTGTGGAGCGGGCGCGAGGCGGACCGGGCCGATGCGGTCTGTCGCTTCTGCGATACCGAATTCG
TCGGTACCGACGGCACCGGCGGCGGCAAGTTCACCATCGCCGAATCGCTCGCATCGCATGTGGCGGCGCATTGGCCCGCG
GGCGATGCGGGTCCCCGCTTCGTCGTGCTGACCGGTGGTGAACCCCTGCTGCAGGTCGATGCCCCGTTGATCGACGCGCT
GCACGCACAGCGCTTCGAGATCGCGGTCGAGACCAACGGCAGCGTGCCGGCGCCGCCCGGCATCGACTGGCTCTGTGTCA
GTCCGAAGGCCGGTGCGCCGCTGCTGCAGCGCTCGGGCCAGGAGCTGAAGGTGGTGGTGCCGCAGGGCGGCATCGATCTC
GGTGAACTCGACGGACTCGATTTCGCGCAGCGCCGCGTGCAGCCGATGGACGGTCCCGATCTGGCCGCCAACACCGACTG
GGCCGTGCGCTGGTGCCTGGCGCATCCACGCTGGCAGCTCAGCCTGCAAACCCACAAACTTCTCGGCATCCGCTGA

Upstream 100 bases:

>100_bases
ACGGGCCGCGACGGCGCGATGCTGACCTACGGCGCCATGGTGTTGGCTTGTGCCGCGGCGCTGGGTTGGGCCGGCTGGGG
CCGGCATTGAGGCGCAACCG

Downstream 100 bases:

>100_bases
ACATATGAATCACTCCCGCTGCGGCTATGCCGCTTCCCCTCGAGGGGGAGCCGCTGGGGCGGCCCGGCAGAGCCGGTCCG
CGGCGGCTGCTCGGACCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Organic Radical Activating; Organic Radical Activating Protein; Radical Activating; Organic Radical Activating-Like Protein; Radical Sam Domain Protein; Queuosine Biosynthesis Protein QueE; Radical SAM Family Protein; Radical SAM; Organic Radical Activating Protein; NrdG Protein; Radical SAM-Superfamily Protein; 50S Ribosomal Protein L; 6- Pyruvoyltetrahydropterin 2-Reductase; Queuosine Biosynthesis QueE Radical SAM; Anaerobic Ribonucleotide Reductase Activating Protein NrdG; Radical SAM Superfamily Protein; GntS Family Protein; Queuosine Biosynthesis Protein; Co PQQ Synthesis Protein Conjectural; Organic Radical Activating Protein NrdG; Radical SAM Superfamily

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTYSVKEVFYTLQGEGSHAGRPAVFCRFAGCNLWSGREADRADAVCRFCDTEFVGTDGTGGGKFTIAESLASHVAAHWPA
GDAGPRFVVLTGGEPLLQVDAPLIDALHAQRFEIAVETNGSVPAPPGIDWLCVSPKAGAPLLQRSGQELKVVVPQGGIDL
GELDGLDFAQRRVQPMDGPDLAANTDWAVRWCLAHPRWQLSLQTHKLLGIR

Sequences:

>Translated_211_residues
MTYSVKEVFYTLQGEGSHAGRPAVFCRFAGCNLWSGREADRADAVCRFCDTEFVGTDGTGGGKFTIAESLASHVAAHWPA
GDAGPRFVVLTGGEPLLQVDAPLIDALHAQRFEIAVETNGSVPAPPGIDWLCVSPKAGAPLLQRSGQELKVVVPQGGIDL
GELDGLDFAQRRVQPMDGPDLAANTDWAVRWCLAHPRWQLSLQTHKLLGIR
>Mature_210_residues
TYSVKEVFYTLQGEGSHAGRPAVFCRFAGCNLWSGREADRADAVCRFCDTEFVGTDGTGGGKFTIAESLASHVAAHWPAG
DAGPRFVVLTGGEPLLQVDAPLIDALHAQRFEIAVETNGSVPAPPGIDWLCVSPKAGAPLLQRSGQELKVVVPQGGIDLG
ELDGLDFAQRRVQPMDGPDLAANTDWAVRWCLAHPRWQLSLQTHKLLGIR

Specific function: Unknown

COG id: COG0602

COG function: function code O; Organic radical activating enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22658; Mature: 22527

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYSVKEVFYTLQGEGSHAGRPAVFCRFAGCNLWSGREADRADAVCRFCDTEFVGTDGTG
CCEEHEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEECCCCCC
GGKFTIAESLASHVAAHWPAGDAGPRFVVLTGGEPLLQVDAPLIDALHAQRFEIAVETNG
CCEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCHHHHHHCCCEEEEEEECCC
SVPAPPGIDWLCVSPKAGAPLLQRSGQELKVVVPQGGIDLGELDGLDFAQRRVQPMDGPD
CCCCCCCCCEEEECCCCCCHHHHCCCCEEEEEECCCCCCHHCCCCCCHHHHHCCCCCCCC
LAANTDWAVRWCLAHPRWQLSLQTHKLLGIR
CCCCCCCEEEEEECCCCEEEEEEEEEEECCC
>Mature Secondary Structure 
TYSVKEVFYTLQGEGSHAGRPAVFCRFAGCNLWSGREADRADAVCRFCDTEFVGTDGTG
CEEHEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEECCCCCC
GGKFTIAESLASHVAAHWPAGDAGPRFVVLTGGEPLLQVDAPLIDALHAQRFEIAVETNG
CCEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCHHHHHHCCCEEEEEEECCC
SVPAPPGIDWLCVSPKAGAPLLQRSGQELKVVVPQGGIDLGELDGLDFAQRRVQPMDGPD
CCCCCCCCCEEEECCCCCCHHHHCCCCEEEEEECCCCCCHHCCCCCCHHHHHCCCCCCCC
LAANTDWAVRWCLAHPRWQLSLQTHKLLGIR
CCCCCCCEEEEEECCCCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA