Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265501
Identifier: 124265501
GI number: 124265501
Start: 334230
End: 335336
Strand: Direct
Name: 124265501
Synonym: Mpe_A0308
Alternate gene names: NA
Gene position: 334230-335336 (Clockwise)
Preceding gene: 124265500
Following gene: 124265502
Centisome position: 8.26
GC content: 72.54
Gene sequence:
>1107_bases ATGGCCCCGCAGCGCAGCAGTTCGGCCTGGCCCCTGGCGGCGGCCTGCGCCTGCCTGATGGTCTACGCCAGCCTGCACCC GTTCACCGGCTGGGAATGGCCGACCGCGACCGACATTCGCTGGTGGCTGCTCCCGGTGCCCAAGCCGCGTGGCGTGGGGC AGTTCGACCTGGTCAGCAATCTGCTCGCCTACGTGCCGCTCGGGGCGTTGCTGACAGGTGGACTGCTGCGCGGCGGGGGC CGCGCCTGGCTGGCGTTCGCCGTCGCGGTCGGGGTGTCCAGCGGTCTGAGCTATGTGCTCGAGACCCTGCAGCACCTGTT GCCGAGGCGGGTGCCGTCGATCATCGACTGGAGCCTGAACACCGCCGGTGCGGCGCTCGGCGCGGTGCTGATGCTGGTGC TGCACGCGCTCGGGCTGCTCGGCCACTGGCAGCGCTGGCGTGAGCGCTGGCTGCTGCGAGACCGCGGCGCCGGCCTGACG CTGCTGCTGTTGTGGCCGTTCGGCCTGCTGTTCCCGCCGCCGCTGCCCTTCGGACTCGGCCATGTGCTGGACCGCGCGCG CGACCTGCTCGCCGAAGGACTGGAGGACACGGCCTGGGACGGCTGGCTCGGCGCGACCGCGACCGTCAGCGAACCGCTGG CGCCGGGGCTCGAGATGTTGGGCGTGGCAGCCGGCCTGCTGGCGCCCTGCCTGCTTGCCTACGCGCTGACGCGGCCCGGT CCGCGCCGCCTGGTGCTGCCGGCCGGGGCGCTGCTGCTGGGCATCGCGGCCACCACGCTGTCGACGGCGTTGAACTTCGG GCCCGAGCACGCGCTGACCTGGTGGACACCGCCGGTGTTGCCGGCGATCGGTGTGGTGGCCGTCGTCGCCGTGGGGCTGA CGTGGCTGCCGGCGCGCGCATCGGCCGCCGTGGCGCTGCTGGTCATCAGTTTCGGCGTGGCGCTGGTCAACATCGCGCCC GGCGACGCCTACTACGCGGCCAGCCTGCAATCGTGGGAGCAGGGCCGTTTCATCCGCTTCCACGGCCTGTCGCAATGGAT CGGCTGGCTGTGGCCCTGGGCGACACTCGCTTACCTGCTCGGTCGTGTCGCAGCCCGGGACGAATAG
Upstream 100 bases:
>100_bases GCCACCGCTGGTTCCGCGTCTTCAACGAGGCTGCGGTGCTGGTGTTCGCCGCGATCGTCGTGCTGGTCGTGGTCAAGCCG TTCTGAGGGCGGCCGGGCGC
Downstream 100 bases:
>100_bases CCTCAAACCTACAATTCCCCGATGAGTTATTACGAGCGTCACATCTTCTTCTGCCTCAACAAGCGCGATGGAGAGGCGGC CTGCGCCGACCACGACGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: VanZ Like Protein; Vanz Family Protein
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MAPQRSSSAWPLAAACACLMVYASLHPFTGWEWPTATDIRWWLLPVPKPRGVGQFDLVSNLLAYVPLGALLTGGLLRGGG RAWLAFAVAVGVSSGLSYVLETLQHLLPRRVPSIIDWSLNTAGAALGAVLMLVLHALGLLGHWQRWRERWLLRDRGAGLT LLLLWPFGLLFPPPLPFGLGHVLDRARDLLAEGLEDTAWDGWLGATATVSEPLAPGLEMLGVAAGLLAPCLLAYALTRPG PRRLVLPAGALLLGIAATTLSTALNFGPEHALTWWTPPVLPAIGVVAVVAVGLTWLPARASAAVALLVISFGVALVNIAP GDAYYAASLQSWEQGRFIRFHGLSQWIGWLWPWATLAYLLGRVAARDE
Sequences:
>Translated_368_residues MAPQRSSSAWPLAAACACLMVYASLHPFTGWEWPTATDIRWWLLPVPKPRGVGQFDLVSNLLAYVPLGALLTGGLLRGGG RAWLAFAVAVGVSSGLSYVLETLQHLLPRRVPSIIDWSLNTAGAALGAVLMLVLHALGLLGHWQRWRERWLLRDRGAGLT LLLLWPFGLLFPPPLPFGLGHVLDRARDLLAEGLEDTAWDGWLGATATVSEPLAPGLEMLGVAAGLLAPCLLAYALTRPG PRRLVLPAGALLLGIAATTLSTALNFGPEHALTWWTPPVLPAIGVVAVVAVGLTWLPARASAAVALLVISFGVALVNIAP GDAYYAASLQSWEQGRFIRFHGLSQWIGWLWPWATLAYLLGRVAARDE >Mature_367_residues APQRSSSAWPLAAACACLMVYASLHPFTGWEWPTATDIRWWLLPVPKPRGVGQFDLVSNLLAYVPLGALLTGGLLRGGGR AWLAFAVAVGVSSGLSYVLETLQHLLPRRVPSIIDWSLNTAGAALGAVLMLVLHALGLLGHWQRWRERWLLRDRGAGLTL LLLWPFGLLFPPPLPFGLGHVLDRARDLLAEGLEDTAWDGWLGATATVSEPLAPGLEMLGVAAGLLAPCLLAYALTRPGP RRLVLPAGALLLGIAATTLSTALNFGPEHALTWWTPPVLPAIGVVAVVAVGLTWLPARASAAVALLVISFGVALVNIAPG DAYYAASLQSWEQGRFIRFHGLSQWIGWLWPWATLAYLLGRVAARDE
Specific function: Unknown
COG id: COG5652
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39452; Mature: 39321
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01159 WW_DOMAIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPQRSSSAWPLAAACACLMVYASLHPFTGWEWPTATDIRWWLLPVPKPRGVGQFDLVSN CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHH LLAYVPLGALLTGGLLRGGGRAWLAFAVAVGVSSGLSYVLETLQHLLPRRVPSIIDWSLN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC TAGAALGAVLMLVLHALGLLGHWQRWRERWLLRDRGAGLTLLLLWPFGLLFPPPLPFGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCHHH HVLDRARDLLAEGLEDTAWDGWLGATATVSEPLAPGLEMLGVAAGLLAPCLLAYALTRPG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC PRRLVLPAGALLLGIAATTLSTALNFGPEHALTWWTPPVLPAIGVVAVVAVGLTWLPARA CCEEEECHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCHHH SAAVALLVISFGVALVNIAPGDAYYAASLQSWEQGRFIRFHGLSQWIGWLWPWATLAYLL HHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH GRVAARDE HHHHHCCC >Mature Secondary Structure APQRSSSAWPLAAACACLMVYASLHPFTGWEWPTATDIRWWLLPVPKPRGVGQFDLVSN CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHH LLAYVPLGALLTGGLLRGGGRAWLAFAVAVGVSSGLSYVLETLQHLLPRRVPSIIDWSLN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC TAGAALGAVLMLVLHALGLLGHWQRWRERWLLRDRGAGLTLLLLWPFGLLFPPPLPFGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCHHH HVLDRARDLLAEGLEDTAWDGWLGATATVSEPLAPGLEMLGVAAGLLAPCLLAYALTRPG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC PRRLVLPAGALLLGIAATTLSTALNFGPEHALTWWTPPVLPAIGVVAVVAVGLTWLPARA CCEEEECHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCHHH SAAVALLVISFGVALVNIAPGDAYYAASLQSWEQGRFIRFHGLSQWIGWLWPWATLAYLL HHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH GRVAARDE HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA