Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265472

Identifier: 124265472

GI number: 124265472

Start: 303464

End: 305785

Strand: Direct

Name: 124265472

Synonym: Mpe_A0279

Alternate gene names: NA

Gene position: 303464-305785 (Clockwise)

Preceding gene: 124265471

Following gene: 124265476

Centisome position: 7.5

GC content: 67.14

Gene sequence:

>2322_bases
ATGGCCACCCCAGCCGCCCCATCCGCCCTGGCCGCTCAAGCGCGGCGGGTGTATATGGAGTCGCTGCTGCTCGCGGTGCC
GACCGCGGTGCAAGGGGTGCTCGACGGTGCCCACCGACTGGCGAACGAGAAGGCCGAACCGCAGCTGGCGCACAAGCGCA
TGAACGCGGCCATCGACCTGACCCGACCCGCACCGCAGTGGCAGCAGGCGCTGATCGACAGCCTCGGTGCCATGCCGCGC
ATCAGCACCTCGGGCGGCAGGACGTCGCTCGGCGCAGCTGCGGCGTCCAGCATGGGCAGTGGGCGCGACACGCTGCAACT
GGTCGACGACGACACCATCGAGGTGGAAATCCTCAGCTCTCGCCTGGCGCTGGCCATGATGGACAAGGCTTCGTGGGAGT
TCACGGACCTGCGCGCCCGCATGTCCAGCCTGGAGCGTCGCGAGGAACTCGACAGTGGCGACGCGCTGCGACCGCATGTG
GTGGCACGTATCGTGATCGACAGCTGGCGGTCGGCCGGCCTGTCGCTGGAGCACTGGCGGACCGTGCAGAAGGTGATCCA
CGCGGCCTTCGGCGAGATGGTCGAGGAGTCCTACCACGAGACCAACCGCTGGCTGCTCGGTGAGGGCGTGCGTCCCGAAA
TCGACCTGCGGCCCCTGATCCGCCGCTCGACCGGCGCACATGTCGCGTCGATCCCGGTGACGACGGGCTTCGGCGACATG
GCGGAGGCGCAGGGCGGCCTGCGGCGCGCGAATGTCGTCATTGCCGGCACGACGACGTCGACCCGCGGGGCCGGTGTCGG
CGAGGAAACCCGGTTGATGACGCGCATGAGCAATCTGGCTCGTACGGCCGGGCATGCGGAAGCGGTGCTGGGTCGACTCA
ACAAGCTGGTGGGCCGGCAGGTGCCATCGTTCGCCGACACGGCGGAGATGCAGCCCTCAACTGGTTTCAAGCGGGCGATC
GCGGAAGCGCAGAGCGGCATCCAGCGCCAACTGGCCACCACCGGACGCGACGAGCGCGCCGCGATCAGCACCCCGGCGCT
GCTGCAGGAGTTGCAGCAGCGCAAGCAGGCACTCAAGGAAGCCGCCAGCACGCCGGTCGAGCGCGCCACCATCGAGATCG
TGGCGTTGCTGTTCCAGAGTATCCTGACTGAAGAGAAGATCCCGGCGGTTGTTCGCGTGTGGTTCGCTCGCCTGCAGATG
CCGGTGCTGCGCGTGGCGGTCAGCGAGCCCGATTTCTTCGCCACCACCGACCATCCGGCGCGCAAGCTGATCGACCGCAT
GGGCGCCTGCGTGATGGGCTTCGACATCAGCTCGCGGGCCGCGGGCGATGCGCTCGACAAGGAAATCAAGCGCGTCGTGC
AGGTCGTGGAGGCCTACCCCGACACCGGTCGTCGGGTGTTCCAGACCGTCCTGACCGAGTTCGAGCGCTTTCTCGAGCAT
TATTTCAAGACCGAGAACGAGGCGACGCGCAAGGGTGTGTCGCTCGCGCAGCAGGTCGAGCAGCGCGAGACGATGGCGAT
CCAGTACACGATCGAGCTGCGCAAGATGCTCAACGAGGTGCCGGTGCAGGAAGGCGTGCGCAACTTCCTGTTCCATGTCT
GGGCCGATGTGCTGGCCACGATGGCGCTGAAGACGGGAGCCGCCAGCGATGCCACCAAGATCATGAAGCGCGCTGCCGCC
GATCTCATCTGGTCGGCGGGTGCAAAGGTGTCGCGTGAAGAACGCGCCGACGTGATTCGCCGCCTCCCGCCGCTGCTGAA
GACGCTGCGCGAAGGCATGGCGGAGGCTGGCCTCGCTCCCGAGAAGCAGGACGAGCACATCCAGGCGCTGAACGACTCGC
TGGCGGCGGCCTTCACTGCCAAGGCGGCAGCGATTCCCGCCGAGCGTCTCGAGGAGTTGATGGCGCGACTCGAGGACCTC
GAGGAAATGCTGCCCGATGCCGACGAGATGCAGATCGACGAGTCCATCGTGATGGACCTGTCAGGGCATGAAAGCACCGA
ACTGCAGATCGTGACTGAGGGGGGATCGATGCCGACGCCAGCCATGATCGCCTGGGCGCGCGAACTGCAGGTCGGCGGTT
GGTACATGCTCGAGCACCGGGGTCGCATCGAGTCGGTGCAACTGGCCTGGCATGGCATGCGGAAACAACTCAGCCTGTTC
GTCTCGCAGCAGGGCCGCGGCACGCTGTTCCAGCAGCACCGGCTGGCGTCCTATCTGCAGGCCGGCCTGCTGGTTCCGGC
GCAAGATGAGGCCCTCACGGTGCGCGCGACCCGCAGCGCGCTGGCCAAGCTAGACGCTGACCCGCAGCGCTTGCTGAACT
GA

Upstream 100 bases:

>100_bases
GGCGGGCAGCGTCAAGGGCGGCGATCCCGACGACCCGAATGCCGGGGCCGTGGTGTAGAGTTGAAACAGTCTGTCTAATC
ACCGTCCGCCCCTATCCTCC

Downstream 100 bases:

>100_bases
ATGGACGAGGGGCGCGGCAACCGCGCCGGTTCGTCAGTGGATCAGACGATCCTCGTCATCGACGAACAACTCGTCGAGGA
TCAGTGCGTCGGGCTCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 773; Mature: 772

Protein sequence:

>773_residues
MATPAAPSALAAQARRVYMESLLLAVPTAVQGVLDGAHRLANEKAEPQLAHKRMNAAIDLTRPAPQWQQALIDSLGAMPR
ISTSGGRTSLGAAAASSMGSGRDTLQLVDDDTIEVEILSSRLALAMMDKASWEFTDLRARMSSLERREELDSGDALRPHV
VARIVIDSWRSAGLSLEHWRTVQKVIHAAFGEMVEESYHETNRWLLGEGVRPEIDLRPLIRRSTGAHVASIPVTTGFGDM
AEAQGGLRRANVVIAGTTTSTRGAGVGEETRLMTRMSNLARTAGHAEAVLGRLNKLVGRQVPSFADTAEMQPSTGFKRAI
AEAQSGIQRQLATTGRDERAAISTPALLQELQQRKQALKEAASTPVERATIEIVALLFQSILTEEKIPAVVRVWFARLQM
PVLRVAVSEPDFFATTDHPARKLIDRMGACVMGFDISSRAAGDALDKEIKRVVQVVEAYPDTGRRVFQTVLTEFERFLEH
YFKTENEATRKGVSLAQQVEQRETMAIQYTIELRKMLNEVPVQEGVRNFLFHVWADVLATMALKTGAASDATKIMKRAAA
DLIWSAGAKVSREERADVIRRLPPLLKTLREGMAEAGLAPEKQDEHIQALNDSLAAAFTAKAAAIPAERLEELMARLEDL
EEMLPDADEMQIDESIVMDLSGHESTELQIVTEGGSMPTPAMIAWARELQVGGWYMLEHRGRIESVQLAWHGMRKQLSLF
VSQQGRGTLFQQHRLASYLQAGLLVPAQDEALTVRATRSALAKLDADPQRLLN

Sequences:

>Translated_773_residues
MATPAAPSALAAQARRVYMESLLLAVPTAVQGVLDGAHRLANEKAEPQLAHKRMNAAIDLTRPAPQWQQALIDSLGAMPR
ISTSGGRTSLGAAAASSMGSGRDTLQLVDDDTIEVEILSSRLALAMMDKASWEFTDLRARMSSLERREELDSGDALRPHV
VARIVIDSWRSAGLSLEHWRTVQKVIHAAFGEMVEESYHETNRWLLGEGVRPEIDLRPLIRRSTGAHVASIPVTTGFGDM
AEAQGGLRRANVVIAGTTTSTRGAGVGEETRLMTRMSNLARTAGHAEAVLGRLNKLVGRQVPSFADTAEMQPSTGFKRAI
AEAQSGIQRQLATTGRDERAAISTPALLQELQQRKQALKEAASTPVERATIEIVALLFQSILTEEKIPAVVRVWFARLQM
PVLRVAVSEPDFFATTDHPARKLIDRMGACVMGFDISSRAAGDALDKEIKRVVQVVEAYPDTGRRVFQTVLTEFERFLEH
YFKTENEATRKGVSLAQQVEQRETMAIQYTIELRKMLNEVPVQEGVRNFLFHVWADVLATMALKTGAASDATKIMKRAAA
DLIWSAGAKVSREERADVIRRLPPLLKTLREGMAEAGLAPEKQDEHIQALNDSLAAAFTAKAAAIPAERLEELMARLEDL
EEMLPDADEMQIDESIVMDLSGHESTELQIVTEGGSMPTPAMIAWARELQVGGWYMLEHRGRIESVQLAWHGMRKQLSLF
VSQQGRGTLFQQHRLASYLQAGLLVPAQDEALTVRATRSALAKLDADPQRLLN
>Mature_772_residues
ATPAAPSALAAQARRVYMESLLLAVPTAVQGVLDGAHRLANEKAEPQLAHKRMNAAIDLTRPAPQWQQALIDSLGAMPRI
STSGGRTSLGAAAASSMGSGRDTLQLVDDDTIEVEILSSRLALAMMDKASWEFTDLRARMSSLERREELDSGDALRPHVV
ARIVIDSWRSAGLSLEHWRTVQKVIHAAFGEMVEESYHETNRWLLGEGVRPEIDLRPLIRRSTGAHVASIPVTTGFGDMA
EAQGGLRRANVVIAGTTTSTRGAGVGEETRLMTRMSNLARTAGHAEAVLGRLNKLVGRQVPSFADTAEMQPSTGFKRAIA
EAQSGIQRQLATTGRDERAAISTPALLQELQQRKQALKEAASTPVERATIEIVALLFQSILTEEKIPAVVRVWFARLQMP
VLRVAVSEPDFFATTDHPARKLIDRMGACVMGFDISSRAAGDALDKEIKRVVQVVEAYPDTGRRVFQTVLTEFERFLEHY
FKTENEATRKGVSLAQQVEQRETMAIQYTIELRKMLNEVPVQEGVRNFLFHVWADVLATMALKTGAASDATKIMKRAAAD
LIWSAGAKVSREERADVIRRLPPLLKTLREGMAEAGLAPEKQDEHIQALNDSLAAAFTAKAAAIPAERLEELMARLEDLE
EMLPDADEMQIDESIVMDLSGHESTELQIVTEGGSMPTPAMIAWARELQVGGWYMLEHRGRIESVQLAWHGMRKQLSLFV
SQQGRGTLFQQHRLASYLQAGLLVPAQDEALTVRATRSALAKLDADPQRLLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84947; Mature: 84816

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPAAPSALAAQARRVYMESLLLAVPTAVQGVLDGAHRLANEKAEPQLAHKRMNAAIDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEC
TRPAPQWQQALIDSLGAMPRISTSGGRTSLGAAAASSMGSGRDTLQLVDDDTIEVEILSS
CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCEEEHHHHH
RLALAMMDKASWEFTDLRARMSSLERREELDSGDALRPHVVARIVIDSWRSAGLSLEHWR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH
TVQKVIHAAFGEMVEESYHETNRWLLGEGVRPEIDLRPLIRRSTGAHVASIPVTTGFGDM
HHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCHH
AEAQGGLRRANVVIAGTTTSTRGAGVGEETRLMTRMSNLARTAGHAEAVLGRLNKLVGRQ
HHHCCCCEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
VPSFADTAEMQPSTGFKRAIAEAQSGIQRQLATTGRDERAAISTPALLQELQQRKQALKE
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHH
AASTPVERATIEIVALLFQSILTEEKIPAVVRVWFARLQMPVLRVAVSEPDFFATTDHPA
HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCEECCCCHH
RKLIDRMGACVMGFDISSRAAGDALDKEIKRVVQVVEAYPDTGRRVFQTVLTEFERFLEH
HHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YFKTENEATRKGVSLAQQVEQRETMAIQYTIELRKMLNEVPVQEGVRNFLFHVWADVLAT
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
MALKTGAASDATKIMKRAAADLIWSAGAKVSREERADVIRRLPPLLKTLREGMAEAGLAP
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCC
EKQDEHIQALNDSLAAAFTAKAAAIPAERLEELMARLEDLEEMLPDADEMQIDESIVMDL
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHEEC
SGHESTELQIVTEGGSMPTPAMIAWARELQVGGWYMLEHRGRIESVQLAWHGMRKQLSLF
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
VSQQGRGTLFQQHRLASYLQAGLLVPAQDEALTVRATRSALAKLDADPQRLLN
HHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure 
ATPAAPSALAAQARRVYMESLLLAVPTAVQGVLDGAHRLANEKAEPQLAHKRMNAAIDL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEC
TRPAPQWQQALIDSLGAMPRISTSGGRTSLGAAAASSMGSGRDTLQLVDDDTIEVEILSS
CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCEEEHHHHH
RLALAMMDKASWEFTDLRARMSSLERREELDSGDALRPHVVARIVIDSWRSAGLSLEHWR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH
TVQKVIHAAFGEMVEESYHETNRWLLGEGVRPEIDLRPLIRRSTGAHVASIPVTTGFGDM
HHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCHH
AEAQGGLRRANVVIAGTTTSTRGAGVGEETRLMTRMSNLARTAGHAEAVLGRLNKLVGRQ
HHHCCCCEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
VPSFADTAEMQPSTGFKRAIAEAQSGIQRQLATTGRDERAAISTPALLQELQQRKQALKE
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHH
AASTPVERATIEIVALLFQSILTEEKIPAVVRVWFARLQMPVLRVAVSEPDFFATTDHPA
HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCEECCCCHH
RKLIDRMGACVMGFDISSRAAGDALDKEIKRVVQVVEAYPDTGRRVFQTVLTEFERFLEH
HHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YFKTENEATRKGVSLAQQVEQRETMAIQYTIELRKMLNEVPVQEGVRNFLFHVWADVLAT
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
MALKTGAASDATKIMKRAAADLIWSAGAKVSREERADVIRRLPPLLKTLREGMAEAGLAP
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCC
EKQDEHIQALNDSLAAAFTAKAAAIPAERLEELMARLEDLEEMLPDADEMQIDESIVMDL
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHEEC
SGHESTELQIVTEGGSMPTPAMIAWARELQVGGWYMLEHRGRIESVQLAWHGMRKQLSLF
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
VSQQGRGTLFQQHRLASYLQAGLLVPAQDEALTVRATRSALAKLDADPQRLLN
HHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA