Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is mhpA [C]
Identifier: 124265357
GI number: 124265357
Start: 173719
End: 174981
Strand: Direct
Name: mhpA [C]
Synonym: Mpe_A0164
Alternate gene names: 124265357
Gene position: 173719-174981 (Clockwise)
Preceding gene: 124265356
Following gene: 124265358
Centisome position: 4.3
GC content: 73.0
Gene sequence:
>1263_bases ATGCACCCTGCTCCGCTGAACCGCCCGCTCGCCGACCTGCCCCCCGCTTGCGAGGTGCTGGTGGTCGGTGCCGGCCCGGC CGGCAGCGCGGCGGCCCGCACGCTGGCGCGCGCTGGCGTCGATGTGGTGCTGATCGACCAGCAGGCCTTTCCGCGCGACA AGGTCTGTGGCGACGGCCTGATTCCCGACGCGCACCGTGCGATGGCGAAGCTGGGCGTGCTCGACGAGGTGATGGCGCTC GCGCAGCCGGTGAAGCATCTGCGCTGCATCGCGCCGCGCGGCGGGCGCATCGACGTGCCGGGCACGCTGGCCGTGCTGCC GCGCCGCCAGCTCGACCTGGTGCTGTGCCGTGCCGCGGCGGAGGCCGGCGCGCGCATGCATGCGCCGCTGCGCTTCATCG AACCGCTTGAGGACGCCGGACGGGTGGTCGGTGCCCGCCTGCAGGGGCACGACGAGGCCCGTGCGCCGCGCGAGATCCGC GCCCGCTGGGTGCTGCTCGCCAGCGGCGCGGTGCCGCAGGCCAGCCTCGCCGCAGGAGTGTGCGACCGCCGCACACCCAG CGGCGTGGCGTTGCGCGGCTACGTCAAGAACGACGCCATGGTCGGTCGCATCACCGAGCTCGAGGTGGCGTGGCATCGCC GGCTCAAGCCCGGCTACGGCTGGATCTTTCCGTGCCGCGACGGCGTGTTCAACATCGGCGTCGGCGTCGCGCAGAGCCAT CGACGCGATGCCCTCGGCCGCCACCGCATGCTGGACGTGAACCTGCGCGAGGTCTTCGCGGCCTTCACCGAGGTGCACGC GCCGGCACGTGAGCTGATGGAAGGCGGCACGCTGCTCGGCGAACTGAAGGGGGCGCCGCTGCGCTGTTCGCTCGAGGGCG CGCGCCGCTCACGTCCGGGCCTGCTGGTGGCCGGCGAGGCGGCCGGCAGCACCTATGCCCTCACCGGCGAAGGCATCGGC AAGGCGCTCGAGACCGGCGTCCTTGCGGCCGAAGCGGTGATCGAAGGCCAGCGGCTGTCGCTCGGTGACGATGCCGTGCG CGCCCGCTACGAGGCCGACCTGGCGGCGCTGAAGCCGCGCTTCGCGATCTACGAGAAAGCCAGCAGCGTCAACGAGCGCC CCTGGCTCGTCGACCTGCTGGTGTGGAGCGCCCGGCGCAGCCCGCGTCGCCTGCAGCGCATGAGCGGCGTGCTCGAGGAG ACACACACGCCCGCCAACCTGGTGACGGCGCGCAGCTTCCTGAGGATGGTGTTCGAACGCTGA
Upstream 100 bases:
>100_bases GATGCGCTCTACCTGCCCGAGGCGCAGCGCGTCTCCGTCTGGTGAGGCGCGGGCTTTCTAGAATGCCGGCCGTGCCTCGG CCCTGCTCGCCTGACGACGC
Downstream 100 bases:
>100_bases GCGCTGAGCCGACACGGGCCTGGCGGTGTAAAGGCTTCGCATTCGCCCTGACTCCCGTCGCGGGGCTTGCTCGCACGGGC GCCCTGGGCCAAGATGGCCC
Product: putative electron transfer oxidoreductase
Products: H2O; 3-(2,3-dihydroxyphenyl)propionate; NAD [C]
Alternate protein names: DGGGPL reductase 1; 2,3-di-O-geranylgeranylglyceryl phosphate reductase 1; Geranylgeranyl reductase 1; GGR 1 [H]
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MHPAPLNRPLADLPPACEVLVVGAGPAGSAAARTLARAGVDVVLIDQQAFPRDKVCGDGLIPDAHRAMAKLGVLDEVMAL AQPVKHLRCIAPRGGRIDVPGTLAVLPRRQLDLVLCRAAAEAGARMHAPLRFIEPLEDAGRVVGARLQGHDEARAPREIR ARWVLLASGAVPQASLAAGVCDRRTPSGVALRGYVKNDAMVGRITELEVAWHRRLKPGYGWIFPCRDGVFNIGVGVAQSH RRDALGRHRMLDVNLREVFAAFTEVHAPARELMEGGTLLGELKGAPLRCSLEGARRSRPGLLVAGEAAGSTYALTGEGIG KALETGVLAAEAVIEGQRLSLGDDAVRARYEADLAALKPRFAIYEKASSVNERPWLVDLLVWSARRSPRRLQRMSGVLEE THTPANLVTARSFLRMVFER
Sequences:
>Translated_420_residues MHPAPLNRPLADLPPACEVLVVGAGPAGSAAARTLARAGVDVVLIDQQAFPRDKVCGDGLIPDAHRAMAKLGVLDEVMAL AQPVKHLRCIAPRGGRIDVPGTLAVLPRRQLDLVLCRAAAEAGARMHAPLRFIEPLEDAGRVVGARLQGHDEARAPREIR ARWVLLASGAVPQASLAAGVCDRRTPSGVALRGYVKNDAMVGRITELEVAWHRRLKPGYGWIFPCRDGVFNIGVGVAQSH RRDALGRHRMLDVNLREVFAAFTEVHAPARELMEGGTLLGELKGAPLRCSLEGARRSRPGLLVAGEAAGSTYALTGEGIG KALETGVLAAEAVIEGQRLSLGDDAVRARYEADLAALKPRFAIYEKASSVNERPWLVDLLVWSARRSPRRLQRMSGVLEE THTPANLVTARSFLRMVFER >Mature_420_residues MHPAPLNRPLADLPPACEVLVVGAGPAGSAAARTLARAGVDVVLIDQQAFPRDKVCGDGLIPDAHRAMAKLGVLDEVMAL AQPVKHLRCIAPRGGRIDVPGTLAVLPRRQLDLVLCRAAAEAGARMHAPLRFIEPLEDAGRVVGARLQGHDEARAPREIR ARWVLLASGAVPQASLAAGVCDRRTPSGVALRGYVKNDAMVGRITELEVAWHRRLKPGYGWIFPCRDGVFNIGVGVAQSH RRDALGRHRMLDVNLREVFAAFTEVHAPARELMEGGTLLGELKGAPLRCSLEGARRSRPGLLVAGEAAGSTYALTGEGIG KALETGVLAAEAVIEGQRLSLGDDAVRARYEADLAALKPRFAIYEKASSVNERPWLVDLLVWSARRSPRRLQRMSGVLEE THTPANLVTARSFLRMVFER
Specific function: Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the geranylgeranyl reductase family. DGGGPL reductase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003953 - InterPro: IPR011777 - InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF00890 FAD_binding_2; PF01494 FAD_binding_3 [H]
EC number: 1.14.13.- [C]
Molecular weight: Translated: 45255; Mature: 45255
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPAPLNRPLADLPPACEVLVVGAGPAGSAAARTLARAGVDVVLIDQQAFPRDKVCGDGL CCCCCCCCCHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC IPDAHRAMAKLGVLDEVMALAQPVKHLRCIAPRGGRIDVPGTLAVLPRRQLDLVLCRAAA CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCCCEEECCCHHHHHHHHHHHH EAGARMHAPLRFIEPLEDAGRVVGARLQGHDEARAPREIRARWVLLASGAVPQASLAAGV HCCCHHCCCHHHHCCHHHHHHHEEHHHCCCCHHCCCHHHHEEEEEEECCCCCHHHHHHHH CDRRTPSGVALRGYVKNDAMVGRITELEVAWHRRLKPGYGWIFPCRDGVFNIGVGVAQSH HCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCHHHHH RRDALGRHRMLDVNLREVFAAFTEVHAPARELMEGGTLLGELKGAPLRCSLEGARRSRPG HHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCCCCCC LLVAGEAAGSTYALTGEGIGKALETGVLAAEAVIEGQRLSLGDDAVRARYEADLAALKPR EEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCH FAIYEKASSVNERPWLVDLLVWSARRSPRRLQRMSGVLEETHTPANLVTARSFLRMVFER HHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MHPAPLNRPLADLPPACEVLVVGAGPAGSAAARTLARAGVDVVLIDQQAFPRDKVCGDGL CCCCCCCCCHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC IPDAHRAMAKLGVLDEVMALAQPVKHLRCIAPRGGRIDVPGTLAVLPRRQLDLVLCRAAA CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCCCEEECCCHHHHHHHHHHHH EAGARMHAPLRFIEPLEDAGRVVGARLQGHDEARAPREIRARWVLLASGAVPQASLAAGV HCCCHHCCCHHHHCCHHHHHHHEEHHHCCCCHHCCCHHHHEEEEEEECCCCCHHHHHHHH CDRRTPSGVALRGYVKNDAMVGRITELEVAWHRRLKPGYGWIFPCRDGVFNIGVGVAQSH HCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCHHHHH RRDALGRHRMLDVNLREVFAAFTEVHAPARELMEGGTLLGELKGAPLRCSLEGARRSRPG HHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCCCCCC LLVAGEAAGSTYALTGEGIGKALETGVLAAEAVIEGQRLSLGDDAVRARYEADLAALKPR EEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCH FAIYEKASSVNERPWLVDLLVWSARRSPRRLQRMSGVLEETHTPANLVTARSFLRMVFER HHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 3-(3-hydroxyphenyl)propionate; NADH; O2 [C]
Specific reaction: 3-(3-hydroxyphenyl)propionate + NADH + O2 = H2O + 3-(2,3-dihydroxyphenyl)propionate + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014 [H]