Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is ygcG [H]
Identifier: 124265339
GI number: 124265339
Start: 152199
End: 153116
Strand: Direct
Name: ygcG [H]
Synonym: Mpe_A0146
Alternate gene names: 124265339
Gene position: 152199-153116 (Clockwise)
Preceding gene: 124265338
Following gene: 124265347
Centisome position: 3.76
GC content: 75.6
Gene sequence:
>918_bases ATGCGACACGGCTGGCGGCGCTGGCTCGCAAGCCTGGCGCTGGCGCTGCTGGTGGGGCCGTGGAGCGCGAGCAGCGCCCA GGACCTGCGGCCGGTGCCGGTGCTCAGCGCCAGCGTGATCGACCAGACCGGCACGCTGACGCGCGCGCAGGTCAGCGCGC TGGAGGCCAAGCTCGCGGCCTTCGAGCGCGAGGCCGGTTCGCAGCTGGTGGTGCTGATCGTCGCGACCACCCAACCCGAG GACATCGCCGCCTACGCGCAGCGCGTCGGCGAGAGCTGGAAGATCGGCCGGCGCGAGGTGGGCGACGGGCTGATCGTGCT GGTGGCCAAGGACGACCGCAAGGTCCGCATCGAGGTGGCCAAGGCGCTGGAGGGCGCGGTGCCCGACCTGGCGGCCCGGC AGATCATCGACCGCGCGCTGACGCCGGCCTTCCGGGCCGGCGATTTCGCGGGGGGGCTGAACGCCGCGGTCGACCAGCTC GCGGCGCGCATCCGCGGCGAGGCGCTGCCGGCGCCGGGCTCGGTGTCGAAGGCACCTCAGTCCGGGGCGCAATGGCAGGA CTTCGCGATGTTCTTCCTGCTCGCGGTGCCGATCGCCGGTGCCGTGCTCACTGGCGTGCTGGGCCGCAAGCTCGGCACGC TGGCCACCAGCGTCGGCGCCGGCGGTCTGGCCTGGGCGGTGTCGGCCAGCCTGCTGATCGGCGGCGCGGCGGCGTTGGTG GCGCTGGTGCTGGTAGGCGTGCTGGGCCTGGGCGCGGCGCGGCGGCGCGGCCTGGACACCGGCGGCCATGGCGTGCCGCC CATCATCTGGGGCGGTGGCGGCAGCAGCGGCGGCGGTTGGGGCGGCGGTGGCGGCGGGGGTTTCTCGTCCGGCGGTGGCG GCGATTTCGGCGGCGGCGGCGCGTCGGGAGACTGGTGA
Upstream 100 bases:
>100_bases GGCTACGCGGCCAAGCCCAACTTCACGGTGCAGAACGAGGCGCAGATCTCGGCGCCGCCGGCGGTGAGTTTCGAGAAGCC GGCCTCGAAGTGAGACCTTG
Downstream 100 bases:
>100_bases TGATGGACCGGCTGATCCGACTGCTGCGCCACTGCTGGCTCGACGAGGACGACGCGCGCCGCGCGCTCGGCCCGGTGGCG CTGGAGCGCATCGAGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MRHGWRRWLASLALALLVGPWSASSAQDLRPVPVLSASVIDQTGTLTRAQVSALEAKLAAFEREAGSQLVVLIVATTQPE DIAAYAQRVGESWKIGRREVGDGLIVLVAKDDRKVRIEVAKALEGAVPDLAARQIIDRALTPAFRAGDFAGGLNAAVDQL AARIRGEALPAPGSVSKAPQSGAQWQDFAMFFLLAVPIAGAVLTGVLGRKLGTLATSVGAGGLAWAVSASLLIGGAAALV ALVLVGVLGLGAARRRGLDTGGHGVPPIIWGGGGSSGGGWGGGGGGGFSSGGGGDFGGGGASGDW
Sequences:
>Translated_305_residues MRHGWRRWLASLALALLVGPWSASSAQDLRPVPVLSASVIDQTGTLTRAQVSALEAKLAAFEREAGSQLVVLIVATTQPE DIAAYAQRVGESWKIGRREVGDGLIVLVAKDDRKVRIEVAKALEGAVPDLAARQIIDRALTPAFRAGDFAGGLNAAVDQL AARIRGEALPAPGSVSKAPQSGAQWQDFAMFFLLAVPIAGAVLTGVLGRKLGTLATSVGAGGLAWAVSASLLIGGAAALV ALVLVGVLGLGAARRRGLDTGGHGVPPIIWGGGGSSGGGWGGGGGGGFSSGGGGDFGGGGASGDW >Mature_305_residues MRHGWRRWLASLALALLVGPWSASSAQDLRPVPVLSASVIDQTGTLTRAQVSALEAKLAAFEREAGSQLVVLIVATTQPE DIAAYAQRVGESWKIGRREVGDGLIVLVAKDDRKVRIEVAKALEGAVPDLAARQIIDRALTPAFRAGDFAGGLNAAVDQL AARIRGEALPAPGSVSKAPQSGAQWQDFAMFFLLAVPIAGAVLTGVLGRKLGTLATSVGAGGLAWAVSASLLIGGAAALV ALVLVGVLGLGAARRRGLDTGGHGVPPIIWGGGGSSGGGWGGGGGGGFSSGGGGDFGGGGASGDW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=165, Percent_Identity=33.9393939393939, Blast_Score=91, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 30550; Mature: 30550
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHGWRRWLASLALALLVGPWSASSAQDLRPVPVLSASVIDQTGTLTRAQVSALEAKLAA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH FEREAGSQLVVLIVATTQPEDIAAYAQRVGESWKIGRREVGDGLIVLVAKDDRKVRIEVA HHHHCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHCCCCCEEEEEECCCCEEHHHHH KALEGAVPDLAARQIIDRALTPAFRAGDFAGGLNAAVDQLAARIRGEALPAPGSVSKAPQ HHHHCCCCHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC SGAQWQDFAMFFLLAVPIAGAVLTGVLGRKLGTLATSVGAGGLAWAVSASLLIGGAAALV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ALVLVGVLGLGAARRRGLDTGGHGVPPIIWGGGGSSGGGWGGGGGGGFSSGGGGDFGGGG HHHHHHHHCCCHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASGDW CCCCC >Mature Secondary Structure MRHGWRRWLASLALALLVGPWSASSAQDLRPVPVLSASVIDQTGTLTRAQVSALEAKLAA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH FEREAGSQLVVLIVATTQPEDIAAYAQRVGESWKIGRREVGDGLIVLVAKDDRKVRIEVA HHHHCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHCCCCCEEEEEECCCCEEHHHHH KALEGAVPDLAARQIIDRALTPAFRAGDFAGGLNAAVDQLAARIRGEALPAPGSVSKAPQ HHHHCCCCHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC SGAQWQDFAMFFLLAVPIAGAVLTGVLGRKLGTLATSVGAGGLAWAVSASLLIGGAAALV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ALVLVGVLGLGAARRRGLDTGGHGVPPIIWGGGGSSGGGWGGGGGGGFSSGGGGDFGGGG HHHHHHHHCCCHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASGDW CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]