| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is thsA [H]
Identifier: 124027791
GI number: 124027791
Start: 923876
End: 925549
Strand: Reverse
Name: thsA [H]
Synonym: Hbut_0918
Alternate gene names: 124027791
Gene position: 925549-923876 (Counterclockwise)
Preceding gene: 124027792
Following gene: 124027790
Centisome position: 55.52
GC content: 52.87
Gene sequence:
>1674_bases ATGGCGCTTGGTGTACCAGTACTTATACTGAAGGAGGGCACCCAGCGCGTCTATGGTAGGGAGGCGCTAAGAAACAACAT CCTTGCAGCCAAGGTGCTAGCTGAGGTTCTAAAGAGCAGTCTAGGCCCACGCGGCCTAGACAAGATGCTAGTAGACTCCT TCGGCGACGTAACAATAACCAATGACGGCGCAACAATACTCAAGGAGATGGAGATACAGCACCCTGCAGCAAAGCTGATG GTGGAGGTTGCTAAGGCCCAGGACGCGGAGGTAGGCGACGGCACTACTAGTGCCGTAGTACTCGCTGGCATGCTGCTAGA CCGGGCAGAAAACCTGCTTGACCAGAACATACACCCAACAACTATTATTGAGGGTTACAAGAAGGCACTAGACTTCGCCC TCGCAGAACTAGAGAAGCTCGGCATAAAGGTGGACATTAATGACAAGCAGCTGCTAAAGAGGATAGCCTCGACATCCCTC TACAGTAAGTATGTTGGTAGTGGCGCCACCCTCGACAAGCTGACAGACATGGTTGTAGAAGCTGTGCTAAAGGTTGCCGA GCCGCGCGGCGACGGCACCTACGTAGTGAGGCTTGACAGGATAAAGATTGAGAAGAAGAAGGGTGGCAGCCTGCTAGACA GTCAGCTAGTAGAGGGCATTGTCCTTGACAAGGAGGTTGTACACCCAGGCATGCCTAAGAGAGTTGAGAATGCCTACATA GTACTCCTTGACGCTCCACTAGAGGTTGAGAAGCCAGAGATAACTGCTAAGATCAACATTACCTCGCCAGAGCAGATAAA GGCATTCCTCGACGAAGAGGCTAGGCTGCTAAAGGAGATGGTCGAGAAGATCTACAACATCGCCCTCGAGAGGATGAAAA AGGACGGTGTTGACCCAAGCAAGGCTGGTATCGTAGTTATAACCCAGAAGGGTATTGACGAGGTTGCCCAGCACTTCCTA GCAAAGAAGGGCATCATGGCAGTAAGAAGGGTAAAGAGGAGCGACCTAGAGAAGCTGGAGTACGCTACTGGCGGCCGCAT CGTCAGCAGCCTACGCGACCTAAAGCCAGAGGACCTAGGCTTCGCCAAGCTCGTCGAGGAGAGAAAGGTTGGCAACGACA AGATGGTATTCATCGAGGGCTGCCCGAACCCCAAGGCCGTAACAATACTGCTACGTGGCGCCAACGACATGGTGCTAGAC GAGGCTGAGAGAAGCATCAACGACGCACTACACGTGCTAAGGAATGTGCTAAGAAAGCCCATGATCGTGCCAGGCGGCGG CGCCGTAGAGGTTGAGCTAGCTCTAAGGCTACGTAAATTCGCCGAGAGCCTAGGCGGTAAGGAGCAGCTAGCAGTAGAGG CCTACGCAGAAGCCCTCGAGGAGATACCAATGATACTAGCTGAGAGCGCTGGCATGGACGCACTACAAGCATTGATGGAC CTAAGGAGGCTACACGCAGAGGGCAAGACCCTAGCAGGCATCAACGTACTCAACAGCAAGATCGAGGAGGACATGGTAAA GATCAACGTTATCGAACCGATACTAGTCAAGGAGCAGGTGCTAAAGAGCGCTACTGAAGCAGCAACAACAATCCTAAAGA TCGACGACGTAATCGCAGCCGCACCAAAGACTGAGGAGAAGAAGAAGGGCAAGAAGGGCGGCGAAGAGGAGTAA
Upstream 100 bases:
>100_bases TGTCCCTGTACCAACAAATCCTGGAGTAACGCTTATATAGAAGCACCCCGAAGGCAATCTATCCGGACATAGGATAGTGG GCGCGTAGGGGTGTAGCATA
Downstream 100 bases:
>100_bases CCCAACCCATAACTTTTAATCACAGATTTTAGTTCTAACCGACGGTAGTCCGGCTCTCTTTGTTCTCAAAACTAAATACA CTACTCCCCCCAAATCTCAT
Product: thermosome alpha subunit
Products: NA
Alternate protein names: Chaperonin subunit alpha; Thermosome subunit 1 [H]
Number of amino acids: Translated: 557; Mature: 556
Protein sequence:
>557_residues MALGVPVLILKEGTQRVYGREALRNNILAAKVLAEVLKSSLGPRGLDKMLVDSFGDVTITNDGATILKEMEIQHPAAKLM VEVAKAQDAEVGDGTTSAVVLAGMLLDRAENLLDQNIHPTTIIEGYKKALDFALAELEKLGIKVDINDKQLLKRIASTSL YSKYVGSGATLDKLTDMVVEAVLKVAEPRGDGTYVVRLDRIKIEKKKGGSLLDSQLVEGIVLDKEVVHPGMPKRVENAYI VLLDAPLEVEKPEITAKINITSPEQIKAFLDEEARLLKEMVEKIYNIALERMKKDGVDPSKAGIVVITQKGIDEVAQHFL AKKGIMAVRRVKRSDLEKLEYATGGRIVSSLRDLKPEDLGFAKLVEERKVGNDKMVFIEGCPNPKAVTILLRGANDMVLD EAERSINDALHVLRNVLRKPMIVPGGGAVEVELALRLRKFAESLGGKEQLAVEAYAEALEEIPMILAESAGMDALQALMD LRRLHAEGKTLAGINVLNSKIEEDMVKINVIEPILVKEQVLKSATEAATTILKIDDVIAAAPKTEEKKKGKKGGEEE
Sequences:
>Translated_557_residues MALGVPVLILKEGTQRVYGREALRNNILAAKVLAEVLKSSLGPRGLDKMLVDSFGDVTITNDGATILKEMEIQHPAAKLM VEVAKAQDAEVGDGTTSAVVLAGMLLDRAENLLDQNIHPTTIIEGYKKALDFALAELEKLGIKVDINDKQLLKRIASTSL YSKYVGSGATLDKLTDMVVEAVLKVAEPRGDGTYVVRLDRIKIEKKKGGSLLDSQLVEGIVLDKEVVHPGMPKRVENAYI VLLDAPLEVEKPEITAKINITSPEQIKAFLDEEARLLKEMVEKIYNIALERMKKDGVDPSKAGIVVITQKGIDEVAQHFL AKKGIMAVRRVKRSDLEKLEYATGGRIVSSLRDLKPEDLGFAKLVEERKVGNDKMVFIEGCPNPKAVTILLRGANDMVLD EAERSINDALHVLRNVLRKPMIVPGGGAVEVELALRLRKFAESLGGKEQLAVEAYAEALEEIPMILAESAGMDALQALMD LRRLHAEGKTLAGINVLNSKIEEDMVKINVIEPILVKEQVLKSATEAATTILKIDDVIAAAPKTEEKKKGKKGGEEE >Mature_556_residues ALGVPVLILKEGTQRVYGREALRNNILAAKVLAEVLKSSLGPRGLDKMLVDSFGDVTITNDGATILKEMEIQHPAAKLMV EVAKAQDAEVGDGTTSAVVLAGMLLDRAENLLDQNIHPTTIIEGYKKALDFALAELEKLGIKVDINDKQLLKRIASTSLY SKYVGSGATLDKLTDMVVEAVLKVAEPRGDGTYVVRLDRIKIEKKKGGSLLDSQLVEGIVLDKEVVHPGMPKRVENAYIV LLDAPLEVEKPEITAKINITSPEQIKAFLDEEARLLKEMVEKIYNIALERMKKDGVDPSKAGIVVITQKGIDEVAQHFLA KKGIMAVRRVKRSDLEKLEYATGGRIVSSLRDLKPEDLGFAKLVEERKVGNDKMVFIEGCPNPKAVTILLRGANDMVLDE AERSINDALHVLRNVLRKPMIVPGGGAVEVELALRLRKFAESLGGKEQLAVEAYAEALEEIPMILAESAGMDALQALMDL RRLHAEGKTLAGINVLNSKIEEDMVKINVIEPILVKEQVLKSATEAATTILKIDDVIAAAPKTEEKKKGKKGGEEE
Specific function: Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity [H]
COG id: COG0459
COG function: function code O; Chaperonin GroEL (HSP60 family)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TCP-1 chaperonin family [H]
Homologues:
Organism=Homo sapiens, GI24307939, Length=542, Percent_Identity=43.9114391143911, Blast_Score=400, Evalue=1e-111, Organism=Homo sapiens, GI63162572, Length=556, Percent_Identity=38.8489208633094, Blast_Score=385, Evalue=1e-107, Organism=Homo sapiens, GI38455427, Length=521, Percent_Identity=42.2264875239923, Blast_Score=366, Evalue=1e-101, Organism=Homo sapiens, GI57863257, Length=561, Percent_Identity=39.9286987522282, Blast_Score=360, Evalue=1e-99, Organism=Homo sapiens, GI5453607, Length=541, Percent_Identity=36.4140480591497, Blast_Score=350, Evalue=2e-96, Organism=Homo sapiens, GI4502643, Length=524, Percent_Identity=39.3129770992366, Blast_Score=332, Evalue=5e-91, Organism=Homo sapiens, GI58331173, Length=518, Percent_Identity=39.7683397683398, Blast_Score=330, Evalue=2e-90, Organism=Homo sapiens, GI58761484, Length=556, Percent_Identity=35.9712230215827, Blast_Score=328, Evalue=6e-90, Organism=Homo sapiens, GI261399877, Length=500, Percent_Identity=35.4, Blast_Score=310, Evalue=2e-84, Organism=Homo sapiens, GI5453603, Length=546, Percent_Identity=37.1794871794872, Blast_Score=305, Evalue=6e-83, Organism=Homo sapiens, GI302058290, Length=518, Percent_Identity=36.4864864864865, Blast_Score=277, Evalue=2e-74, Organism=Homo sapiens, GI58331171, Length=524, Percent_Identity=35.1145038167939, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI302058292, Length=518, Percent_Identity=35.5212355212355, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI261399875, Length=455, Percent_Identity=33.1868131868132, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI48762932, Length=569, Percent_Identity=31.6344463971881, Blast_Score=226, Evalue=6e-59, Organism=Homo sapiens, GI57863259, Length=407, Percent_Identity=35.6265356265356, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI58331185, Length=331, Percent_Identity=33.8368580060423, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI7657253, Length=545, Percent_Identity=26.7889908256881, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI25914754, Length=453, Percent_Identity=24.7240618101545, Blast_Score=103, Evalue=6e-22, Organism=Homo sapiens, GI9055272, Length=453, Percent_Identity=24.7240618101545, Blast_Score=103, Evalue=6e-22, Organism=Homo sapiens, GI121583483, Length=206, Percent_Identity=29.6116504854369, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1790586, Length=471, Percent_Identity=26.1146496815287, Blast_Score=77, Evalue=3e-15, Organism=Caenorhabditis elegans, GI25144674, Length=539, Percent_Identity=43.5992578849722, Blast_Score=395, Evalue=1e-110, Organism=Caenorhabditis elegans, GI17532603, Length=528, Percent_Identity=42.4242424242424, Blast_Score=369, Evalue=1e-102, Organism=Caenorhabditis elegans, GI25148561, Length=543, Percent_Identity=35.7274401473296, Blast_Score=343, Evalue=1e-94, Organism=Caenorhabditis elegans, GI17532601, Length=546, Percent_Identity=39.9267399267399, Blast_Score=342, Evalue=3e-94, Organism=Caenorhabditis elegans, GI17564182, Length=540, Percent_Identity=34.8148148148148, Blast_Score=323, Evalue=2e-88, Organism=Caenorhabditis elegans, GI25147750, Length=548, Percent_Identity=35.948905109489, Blast_Score=304, Evalue=6e-83, Organism=Caenorhabditis elegans, GI25144678, Length=527, Percent_Identity=37.3814041745731, Blast_Score=303, Evalue=2e-82, Organism=Caenorhabditis elegans, GI32566944, Length=462, Percent_Identity=33.982683982684, Blast_Score=268, Evalue=5e-72, Organism=Caenorhabditis elegans, GI25144680, Length=398, Percent_Identity=38.9447236180905, Blast_Score=254, Evalue=6e-68, Organism=Caenorhabditis elegans, GI71981457, Length=340, Percent_Identity=42.0588235294118, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71998178, Length=589, Percent_Identity=29.3718166383701, Blast_Score=213, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17555558, Length=569, Percent_Identity=23.5500878734622, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193210679, Length=142, Percent_Identity=32.3943661971831, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6322446, Length=548, Percent_Identity=37.5912408759124, Blast_Score=368, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6322524, Length=552, Percent_Identity=38.5869565217391, Blast_Score=351, Evalue=2e-97, Organism=Saccharomyces cerevisiae, GI6320418, Length=552, Percent_Identity=38.768115942029, Blast_Score=342, Evalue=1e-94, Organism=Saccharomyces cerevisiae, GI6322350, Length=540, Percent_Identity=36.1111111111111, Blast_Score=330, Evalue=5e-91, Organism=Saccharomyces cerevisiae, GI6320058, Length=527, Percent_Identity=35.4838709677419, Blast_Score=307, Evalue=3e-84, Organism=Saccharomyces cerevisiae, GI6320393, Length=462, Percent_Identity=36.7965367965368, Blast_Score=277, Evalue=4e-75, Organism=Saccharomyces cerevisiae, GI6322049, Length=530, Percent_Identity=35.8490566037736, Blast_Score=277, Evalue=4e-75, Organism=Saccharomyces cerevisiae, GI6322452, Length=532, Percent_Identity=30.0751879699248, Blast_Score=230, Evalue=5e-61, Organism=Drosophila melanogaster, GI17647245, Length=542, Percent_Identity=41.6974169741697, Blast_Score=374, Evalue=1e-104, Organism=Drosophila melanogaster, GI24652903, Length=519, Percent_Identity=42.0038535645472, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24647512, Length=550, Percent_Identity=37.8181818181818, Blast_Score=348, Evalue=7e-96, Organism=Drosophila melanogaster, GI24647510, Length=550, Percent_Identity=37.8181818181818, Blast_Score=348, Evalue=7e-96, Organism=Drosophila melanogaster, GI24649027, Length=553, Percent_Identity=38.878842676311, Blast_Score=345, Evalue=6e-95, Organism=Drosophila melanogaster, GI24649029, Length=553, Percent_Identity=38.878842676311, Blast_Score=345, Evalue=6e-95, Organism=Drosophila melanogaster, GI24645179, Length=547, Percent_Identity=36.563071297989, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI24583944, Length=520, Percent_Identity=39.4230769230769, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI18859933, Length=525, Percent_Identity=39.6190476190476, Blast_Score=322, Evalue=4e-88, Organism=Drosophila melanogaster, GI28571140, Length=554, Percent_Identity=35.1985559566787, Blast_Score=296, Evalue=3e-80, Organism=Drosophila melanogaster, GI18858175, Length=554, Percent_Identity=35.1985559566787, Blast_Score=295, Evalue=4e-80, Organism=Drosophila melanogaster, GI19921848, Length=569, Percent_Identity=32.688927943761, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI45550936, Length=547, Percent_Identity=23.217550274223, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI45550132, Length=547, Percent_Identity=23.217550274223, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI45550935, Length=547, Percent_Identity=23.217550274223, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI20130093, Length=275, Percent_Identity=26.5454545454545, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI45552711, Length=275, Percent_Identity=26.5454545454545, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: 2180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 15012 Molecules/Cell In: Growth Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017998 - InterPro: IPR002194 - InterPro: IPR002423 - InterPro: IPR012714 [H]
Pfam domain/function: PF00118 Cpn60_TCP1 [H]
EC number: NA
Molecular weight: Translated: 60783; Mature: 60652
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS00750 TCP1_1 ; PS00751 TCP1_2 ; PS00995 TCP1_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGVPVLILKEGTQRVYGREALRNNILAAKVLAEVLKSSLGPRGLDKMLVDSFGDVTIT CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEE NDGATILKEMEIQHPAAKLMVEVAKAQDAEVGDGTTSAVVLAGMLLDRAENLLDQNIHPT CCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH TIIEGYKKALDFALAELEKLGIKVDINDKQLLKRIASTSLYSKYVGSGATLDKLTDMVVE HHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AVLKVAEPRGDGTYVVRLDRIKIEKKKGGSLLDSQLVEGIVLDKEVVHPGMPKRVENAYI HHHHHHCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCCEE VLLDAPLEVEKPEITAKINITSPEQIKAFLDEEARLLKEMVEKIYNIALERMKKDGVDPS EEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KAGIVVITQKGIDEVAQHFLAKKGIMAVRRVKRSDLEKLEYATGGRIVSSLRDLKPEDLG CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC FAKLVEERKVGNDKMVFIEGCPNPKAVTILLRGANDMVLDEAERSINDALHVLRNVLRKP HHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC MIVPGGGAVEVELALRLRKFAESLGGKEQLAVEAYAEALEEIPMILAESAGMDALQALMD EEECCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LRRLHAEGKTLAGINVLNSKIEEDMVKINVIEPILVKEQVLKSATEAATTILKIDDVIAA HHHHHCCCCEEEHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APKTEEKKKGKKGGEEE CCCCHHHHCCCCCCCCC >Mature Secondary Structure ALGVPVLILKEGTQRVYGREALRNNILAAKVLAEVLKSSLGPRGLDKMLVDSFGDVTIT CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEE NDGATILKEMEIQHPAAKLMVEVAKAQDAEVGDGTTSAVVLAGMLLDRAENLLDQNIHPT CCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH TIIEGYKKALDFALAELEKLGIKVDINDKQLLKRIASTSLYSKYVGSGATLDKLTDMVVE HHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AVLKVAEPRGDGTYVVRLDRIKIEKKKGGSLLDSQLVEGIVLDKEVVHPGMPKRVENAYI HHHHHHCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCCEE VLLDAPLEVEKPEITAKINITSPEQIKAFLDEEARLLKEMVEKIYNIALERMKKDGVDPS EEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KAGIVVITQKGIDEVAQHFLAKKGIMAVRRVKRSDLEKLEYATGGRIVSSLRDLKPEDLG CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC FAKLVEERKVGNDKMVFIEGCPNPKAVTILLRGANDMVLDEAERSINDALHVLRNVLRKP HHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC MIVPGGGAVEVELALRLRKFAESLGGKEQLAVEAYAEALEEIPMILAESAGMDALQALMD EEECCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LRRLHAEGKTLAGINVLNSKIEEDMVKINVIEPILVKEQVLKSATEAATTILKIDDVIAA HHHHHCCCCEEEHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APKTEEKKKGKKGGEEE CCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10382966 [H]