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The map label for this gene is cdc6 [H]

Identifier: 124027782

GI number: 124027782

Start: 915555

End: 916790

Strand: Reverse

Name: cdc6 [H]

Synonym: Hbut_0909

Alternate gene names: 124027782

Gene position: 916790-915555 (Counterclockwise)

Preceding gene: 124027783

Following gene: 124027781

Centisome position: 54.99

GC content: 49.11

Gene sequence:

>1236_bases
ATGCCTACCGCACGCGACATAATCGAAAGTATACTTGAAAAACCCTCAGTGTTTCGAAGCCGCGACAAGCTCTATCCAGA
GTATGTGCCAGCCTACCTGCCGCACAGAGAGGAGCAGCTCAAGAATCTTGCAACATACTTTAGGCCACTACTAGTTGAGC
CCGGAAGTATATCACAGCGTGTACTACTCGTTGGCAGCATCGGCACCGGCAAGACGGTAACCGCCAAGAGGTTTGGCAGC
GACTTTAAGCAGTTAGCACGCCAACGCGGCATAAACCTTGAATATGTCCATGTGAACTGCCATCGTGACCGCACACTGTA
CCTTGTAGTCCAAGAGATAGCACGCCAGCTACGGATACCCATACCCCCACGCGGCCTCTCCGCACAAGAGATGTTCCACA
TAATACTGAAATACTTGGAGAACCGGGATATGTACGTCATACTAACCCTTGACGAGTTCGACTACTTCATAGAGGTTGCA
GGCAATGATGCAGTATACTTCCTCGTAAGAACATACGACGAACACTCAGAATACACTAAGAGGATAAGCTTCATATTCAT
CTCTAGGAGCCTCACAAGCCTAAGTAGGCTCGACTCGGCCACAGAGAGCTACCTAGTTCGAAACATCATAAACTTCAAGC
CATATGCTAGCCGCGAGCTCTACGACATACTGAAGTATAGAAGTAGTGAGGCGTTCTATGAGGGAACAGTTGGCGACGAC
GTCCTATCATACATAGCAGAGCTTGTTGGTGCAGATACTGGCGGTAGCGGCAATGCTAGGCTAGCTCTGGAAATACTGCT
CCTGGCAGGCCAGGAGGCTGATAAAGAAGGCGCACCAAGGGTAACAATAGAGCATGTTAGGAGAGCGTTTACACAAACAA
ACCCCGATATATCAGTAATGGTTAATGACGCACTCCCACACCTACCGCTCCACGAGCTCTTAATACTACTGGCTATAGTT
AGAACCCTACAGCGAAGCGGAGAACCCTACGTTAGAATAGGCGAGGTTGAAGCTGAATACCACCACATATGCGAGGAGTA
CGGAGAGACACCAAGGAGACACACGCAAGTATACGAGTACGTCATGGACCTAAAGAGGAGGAGCATAATAGAGACGCGTC
TCTCCGGCAAGGGGTATCGGGGTAAGAGTACGCTTATAGGTATTAGTGTTGGCCCATTGGACCTCCTTGAGAAACGTATT
AGAGAGATCATAGAGTATAAGCGGGAGGAACGCTAA

Upstream 100 bases:

>100_bases
ATCATTCTGGCGTACTAGAAGGCTTGGAGAGATAAGCGCAGCAGGGAGGGAGGATAAAAAGGGTATTACAGCAGAGAGTT
CGTAGTGGTAGGCCGAAACT

Downstream 100 bases:

>100_bases
GCCTTGCATGAAAATGAGCAGCCATATTTTCTCGAAATAATATCGAGTAGGGGGAAACTCAGGATACTCCTTGTACTCCT
GCGTAACGGCCAGGTAAACA

Product: cell division control protein 6

Products: NA

Alternate protein names: CDC6 homolog 2 [H]

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MPTARDIIESILEKPSVFRSRDKLYPEYVPAYLPHREEQLKNLATYFRPLLVEPGSISQRVLLVGSIGTGKTVTAKRFGS
DFKQLARQRGINLEYVHVNCHRDRTLYLVVQEIARQLRIPIPPRGLSAQEMFHIILKYLENRDMYVILTLDEFDYFIEVA
GNDAVYFLVRTYDEHSEYTKRISFIFISRSLTSLSRLDSATESYLVRNIINFKPYASRELYDILKYRSSEAFYEGTVGDD
VLSYIAELVGADTGGSGNARLALEILLLAGQEADKEGAPRVTIEHVRRAFTQTNPDISVMVNDALPHLPLHELLILLAIV
RTLQRSGEPYVRIGEVEAEYHHICEEYGETPRRHTQVYEYVMDLKRRSIIETRLSGKGYRGKSTLIGISVGPLDLLEKRI
REIIEYKREER

Sequences:

>Translated_411_residues
MPTARDIIESILEKPSVFRSRDKLYPEYVPAYLPHREEQLKNLATYFRPLLVEPGSISQRVLLVGSIGTGKTVTAKRFGS
DFKQLARQRGINLEYVHVNCHRDRTLYLVVQEIARQLRIPIPPRGLSAQEMFHIILKYLENRDMYVILTLDEFDYFIEVA
GNDAVYFLVRTYDEHSEYTKRISFIFISRSLTSLSRLDSATESYLVRNIINFKPYASRELYDILKYRSSEAFYEGTVGDD
VLSYIAELVGADTGGSGNARLALEILLLAGQEADKEGAPRVTIEHVRRAFTQTNPDISVMVNDALPHLPLHELLILLAIV
RTLQRSGEPYVRIGEVEAEYHHICEEYGETPRRHTQVYEYVMDLKRRSIIETRLSGKGYRGKSTLIGISVGPLDLLEKRI
REIIEYKREER
>Mature_410_residues
PTARDIIESILEKPSVFRSRDKLYPEYVPAYLPHREEQLKNLATYFRPLLVEPGSISQRVLLVGSIGTGKTVTAKRFGSD
FKQLARQRGINLEYVHVNCHRDRTLYLVVQEIARQLRIPIPPRGLSAQEMFHIILKYLENRDMYVILTLDEFDYFIEVAG
NDAVYFLVRTYDEHSEYTKRISFIFISRSLTSLSRLDSATESYLVRNIINFKPYASRELYDILKYRSSEAFYEGTVGDDV
LSYIAELVGADTGGSGNARLALEILLLAGQEADKEGAPRVTIEHVRRAFTQTNPDISVMVNDALPHLPLHELLILLAIVR
TLQRSGEPYVRIGEVEAEYHHICEEYGETPRRHTQVYEYVMDLKRRSIIETRLSGKGYRGKSTLIGISVGPLDLLEKRIR
EIIEYKREER

Specific function: Might be involved in the initiation of DNA replication [H]

COG id: COG1474

COG function: function code LO; Cdc6-related protein, AAA superfamily ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDC6/cdc18 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015163
- InterPro:   IPR014277
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09079 Cdc6_C [H]

EC number: NA

Molecular weight: Translated: 47336; Mature: 47205

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTARDIIESILEKPSVFRSRDKLYPEYVPAYLPHREEQLKNLATYFRPLLVEPGSISQR
CCCHHHHHHHHHCCCHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCE
VLLVGSIGTGKTVTAKRFGSDFKQLARQRGINLEYVHVNCHRDRTLYLVVQEIARQLRIP
EEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCC
IPPRGLSAQEMFHIILKYLENRDMYVILTLDEFDYFIEVAGNDAVYFLVRTYDEHSEYTK
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCEEEEEEEECHHHHHHHH
RISFIFISRSLTSLSRLDSATESYLVRNIINFKPYASRELYDILKYRSSEAFYEGTVGDD
HHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEECCCCCHH
VLSYIAELVGADTGGSGNARLALEILLLAGQEADKEGAPRVTIEHVRRAFTQTNPDISVM
HHHHHHHHHCCCCCCCCCHHEEEEEHHHCCCCCCCCCCCCEEHHHHHHHHHCCCCCEEEE
VNDALPHLPLHELLILLAIVRTLQRSGEPYVRIGEVEAEYHHICEEYGETPRRHTQVYEY
ECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHH
VMDLKRRSIIETRLSGKGYRGKSTLIGISVGPLDLLEKRIREIIEYKREER
HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTARDIIESILEKPSVFRSRDKLYPEYVPAYLPHREEQLKNLATYFRPLLVEPGSISQR
CCHHHHHHHHHCCCHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCE
VLLVGSIGTGKTVTAKRFGSDFKQLARQRGINLEYVHVNCHRDRTLYLVVQEIARQLRIP
EEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCC
IPPRGLSAQEMFHIILKYLENRDMYVILTLDEFDYFIEVAGNDAVYFLVRTYDEHSEYTK
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCEEEEEEEECHHHHHHHH
RISFIFISRSLTSLSRLDSATESYLVRNIINFKPYASRELYDILKYRSSEAFYEGTVGDD
HHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEECCCCCHH
VLSYIAELVGADTGGSGNARLALEILLLAGQEADKEGAPRVTIEHVRRAFTQTNPDISVM
HHHHHHHHHCCCCCCCCCHHEEEEEHHHCCCCCCCCCCCCEEHHHHHHHHHCCCCCEEEE
VNDALPHLPLHELLILLAIVRTLQRSGEPYVRIGEVEAEYHHICEEYGETPRRHTQVYEY
ECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHH
VMDLKRRSIIETRLSGKGYRGKSTLIGISVGPLDLLEKRIREIIEYKREER
HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA