| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is map [H]
Identifier: 124027759
GI number: 124027759
Start: 885886
End: 886794
Strand: Reverse
Name: map [H]
Synonym: Hbut_0885
Alternate gene names: 124027759
Gene position: 886794-885886 (Counterclockwise)
Preceding gene: 124027765
Following gene: 124027758
Centisome position: 53.19
GC content: 50.28
Gene sequence:
>909_bases GTGGAGGAGGAAGCGCTCAAGGCATATCTTGAAGCGGGCCGTATAGCAAGACAAGTGTTAGAGGAGGCTAGTAGAAGGGT AGAGCCTGGACTAAGCGTGCTAGAATTCTGCGAATGGGTGGAAAATCGTATCCGCGAACTTGGCGGCCAGCCAGCATTTC CGTGTAACATCGGCGTAAGCCATATCGCTGCACACTATACCCCAACACTAGATGACACTTCCACCATACCCGAAGACTCT GTTGTCAAAATAGATGTCGGTGTGCATGTAGACGGCTACATCGCCGACACAGCCACAACCATAGACTTAACCGGTGGAAA GTACGCTAGGCTCCTTGAAGCTGTTAGGGAGGCGCTGGAGAAGGCACTGAAAACGGTTAAACCTGGCGCCAAGTTCTCCG ATGTAAGCAAGACAATAGAGACAATAATATCCTCGTACGGATTTAAGCCCGTAGCAAACCTTGGCGGCCACAGCATAGCT CGCTACCGTGTCCATGCTGGCGAAAGCATACCAAACATCTACGAGCCATTTGCTCGTGGCCGCTTCCAGCCAAGCCACGT ATATGCTATAGAGCCATTTGGCACCAATGGCGCTGGCGTAGTTGAGGAGGGAGAACTTGTGACAATATACTCTCTCTCCA AGCCAAACCTCAAACGTAGACTTGACGATACGACACGCAACATCCTCGAGGAGGTTAAGAAGAGGTTCAAAACACTACCA TTCACCGAACGTTGGCTAAGAGATGTAGCGAGCGTGGATCAGCTGCGTCAGTCTCTGAGAAAGCTTAGCAGAATGGGCTT TCTAACAAAGTACCCCATACTAGTCGAGAAGCGTAGAGGCATTGTAGCACAATTCGAGCATACAGTACTAATCCGCGATG ACGGCGAAGTAATCATCACAACAGCGTAG
Upstream 100 bases:
>100_bases CAAAACTCTTAGCCCCTACCCCCGAGGCCACATGTCATATACTATGATGTTAGTAGAGCACTAAACCCTGCCAATCCAAG CCATTAAGTGGGGGCATGCT
Downstream 100 bases:
>100_bases AACAGTAATCAGCTTCAGAGGAACAAAGGAGAAGGAGCTGTGGTGGCACCACGTCTACCTAGTAGAAACCAATATTATGT TGCGCCAAGTTTTTCTGGCA
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MEEEALKAYLEAGRIARQVLEEASRRVEPGLSVLEFCEWVENRIRELGGQPAFPCNIGVSHIAAHYTPTLDDTSTIPEDS VVKIDVGVHVDGYIADTATTIDLTGGKYARLLEAVREALEKALKTVKPGAKFSDVSKTIETIISSYGFKPVANLGGHSIA RYRVHAGESIPNIYEPFARGRFQPSHVYAIEPFGTNGAGVVEEGELVTIYSLSKPNLKRRLDDTTRNILEEVKKRFKTLP FTERWLRDVASVDQLRQSLRKLSRMGFLTKYPILVEKRRGIVAQFEHTVLIRDDGEVIITTA
Sequences:
>Translated_302_residues MEEEALKAYLEAGRIARQVLEEASRRVEPGLSVLEFCEWVENRIRELGGQPAFPCNIGVSHIAAHYTPTLDDTSTIPEDS VVKIDVGVHVDGYIADTATTIDLTGGKYARLLEAVREALEKALKTVKPGAKFSDVSKTIETIISSYGFKPVANLGGHSIA RYRVHAGESIPNIYEPFARGRFQPSHVYAIEPFGTNGAGVVEEGELVTIYSLSKPNLKRRLDDTTRNILEEVKKRFKTLP FTERWLRDVASVDQLRQSLRKLSRMGFLTKYPILVEKRRGIVAQFEHTVLIRDDGEVIITTA >Mature_302_residues MEEEALKAYLEAGRIARQVLEEASRRVEPGLSVLEFCEWVENRIRELGGQPAFPCNIGVSHIAAHYTPTLDDTSTIPEDS VVKIDVGVHVDGYIADTATTIDLTGGKYARLLEAVREALEKALKTVKPGAKFSDVSKTIETIISSYGFKPVANLGGHSIA RYRVHAGESIPNIYEPFARGRFQPSHVYAIEPFGTNGAGVVEEGELVTIYSLSKPNLKRRLDDTTRNILEEVKKRFKTLP FTERWLRDVASVDQLRQSLRKLSRMGFLTKYPILVEKRRGIVAQFEHTVLIRDDGEVIITTA
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI5803092, Length=307, Percent_Identity=33.8762214983713, Blast_Score=173, Evalue=1e-43, Organism=Homo sapiens, GI124494254, Length=275, Percent_Identity=29.4545454545455, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI164420681, Length=196, Percent_Identity=26.0204081632653, Blast_Score=68, Evalue=9e-12, Organism=Escherichia coli, GI1786364, Length=200, Percent_Identity=28.5, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17544396, Length=309, Percent_Identity=33.0097087378641, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17542840, Length=312, Percent_Identity=25, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71996291, Length=208, Percent_Identity=27.4038461538462, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6319380, Length=310, Percent_Identity=30.9677419354839, Blast_Score=152, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6323273, Length=207, Percent_Identity=27.0531400966184, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI17137568, Length=306, Percent_Identity=33.3333333333333, Blast_Score=175, Evalue=3e-44, Organism=Drosophila melanogaster, GI24658585, Length=326, Percent_Identity=27.9141104294479, Blast_Score=117, Evalue=9e-27, Organism=Drosophila melanogaster, GI21355531, Length=203, Percent_Identity=28.0788177339901, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24583427, Length=194, Percent_Identity=26.8041237113402, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002468 - InterPro: IPR018349 - InterPro: IPR011991 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 33725; Mature: 33725
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEEALKAYLEAGRIARQVLEEASRRVEPGLSVLEFCEWVENRIRELGGQPAFPCNIGVS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH HIAAHYTPTLDDTSTIPEDSVVKIDVGVHVDGYIADTATTIDLTGGKYARLLEAVREALE HHHHHCCCCCCCCCCCCCCCEEEEEECEEECCEEECCEEEEEECCCHHHHHHHHHHHHHH KALKTVKPGAKFSDVSKTIETIISSYGFKPVANLGGHSIARYRVHAGESIPNIYEPFARG HHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHCC RFQPSHVYAIEPFGTNGAGVVEEGELVTIYSLSKPNLKRRLDDTTRNILEEVKKRFKTLP CCCCCEEEEECCCCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC FTERWLRDVASVDQLRQSLRKLSRMGFLTKYPILVEKRRGIVAQFEHTVLIRDDGEVIIT CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHCCCCEEEECCEEEEECCCCEEEE TA EC >Mature Secondary Structure MEEEALKAYLEAGRIARQVLEEASRRVEPGLSVLEFCEWVENRIRELGGQPAFPCNIGVS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH HIAAHYTPTLDDTSTIPEDSVVKIDVGVHVDGYIADTATTIDLTGGKYARLLEAVREALE HHHHHCCCCCCCCCCCCCCCEEEEEECEEECCEEECCEEEEEECCCHHHHHHHHHHHHHH KALKTVKPGAKFSDVSKTIETIISSYGFKPVANLGGHSIARYRVHAGESIPNIYEPFARG HHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHCC RFQPSHVYAIEPFGTNGAGVVEEGELVTIYSLSKPNLKRRLDDTTRNILEEVKKRFKTLP CCCCCEEEEECCCCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC FTERWLRDVASVDQLRQSLRKLSRMGFLTKYPILVEKRRGIVAQFEHTVLIRDDGEVIIT CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHCCCCEEEECCEEEEECCCCEEEE TA EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8899719; 11427726 [H]