Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
---|---|
Accession | NC_008818 |
Length | 1,667,163 |
Click here to switch to the map view.
The map label for this gene is 124027697
Identifier: 124027697
GI number: 124027697
Start: 812587
End: 813276
Strand: Reverse
Name: 124027697
Synonym: Hbut_0819
Alternate gene names: NA
Gene position: 813276-812587 (Counterclockwise)
Preceding gene: 124027699
Following gene: 124027695
Centisome position: 48.78
GC content: 53.77
Gene sequence:
>690_bases TTGGCCGAGGCAGCAGTAGAGTATAGTCTGCAGCATCAGCCAAGCATAAGTTTGACAGCTAGGCCTAGCAGGATAAGCTT CCGTAAAGACAGTGAGGGGAGATTCTTGCCCCGCCACGAAGCCCCTCTGGATCCACAGCTTGTCGGCCCTCAAGCATTCA AGCACCCGGCAGTAGCAAAGTGGTGGACATGGCTCCGAGAGGAATACACGCCCCAGAGCAGCGTTGCGATAGTAACACCT TGCAGTAATGTCAAGCCTTACACCAAGAGCCCCGTGAGTAGACGTATTCGCGGTCTCCTCCGCCGTCTAGGCCTATGGGA CAGCAAGGCTAACAAACCACGCGGCATAGAATGGCTATACTTCAGCGACCTCCTAGTCCTAGTCCCATACGAGAAGGCTG AGGAGTACCCTGCTTGCTGCTATGAAGTCCCACCGGAGATCGTGCTCGAAAACCCCAAGCTTCACAGCTTAGTGACAGAC ATACTGGCGAAGGTTATGTTTAACCTAACTGCTAGGGGGCTCCGGGAGGTAGTGGTATTCCTACCGAGGAAGCATATGAG GCTCTGGGATGAGGCGCGTAGGAAGTCGTCTAGGTGGCCTAAGGAGATACTAGTCGGCTATCACATCTTTGAGGTTAGGA AACGGCTGGAGCCAGTACTATACAGGTTTTTAGGGGTGGATACGCCCTAG
Upstream 100 bases:
>100_bases ATTCCTACCTCTTCGTTCTCTGAGGTGACGCTCTGCTCTGGAGTGGGGGCGCGTGGCTTTTACACGGTTTCATGGGTATT ACCTTATCTGGGTTGTCGTC
Downstream 100 bases:
>100_bases GTTTAACAATCCCCAAACACAATGCTTGATGTATGTATGTATGTGAGCTAGCCTCTCCGGCTAGTGTGTAAAACATTGAT CGAGCTATAACGCCGATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MAEAAVEYSLQHQPSISLTARPSRISFRKDSEGRFLPRHEAPLDPQLVGPQAFKHPAVAKWWTWLREEYTPQSSVAIVTP CSNVKPYTKSPVSRRIRGLLRRLGLWDSKANKPRGIEWLYFSDLLVLVPYEKAEEYPACCYEVPPEIVLENPKLHSLVTD ILAKVMFNLTARGLREVVVFLPRKHMRLWDEARRKSSRWPKEILVGYHIFEVRKRLEPVLYRFLGVDTP
Sequences:
>Translated_229_residues MAEAAVEYSLQHQPSISLTARPSRISFRKDSEGRFLPRHEAPLDPQLVGPQAFKHPAVAKWWTWLREEYTPQSSVAIVTP CSNVKPYTKSPVSRRIRGLLRRLGLWDSKANKPRGIEWLYFSDLLVLVPYEKAEEYPACCYEVPPEIVLENPKLHSLVTD ILAKVMFNLTARGLREVVVFLPRKHMRLWDEARRKSSRWPKEILVGYHIFEVRKRLEPVLYRFLGVDTP >Mature_228_residues AEAAVEYSLQHQPSISLTARPSRISFRKDSEGRFLPRHEAPLDPQLVGPQAFKHPAVAKWWTWLREEYTPQSSVAIVTPC SNVKPYTKSPVSRRIRGLLRRLGLWDSKANKPRGIEWLYFSDLLVLVPYEKAEEYPACCYEVPPEIVLENPKLHSLVTDI LAKVMFNLTARGLREVVVFLPRKHMRLWDEARRKSSRWPKEILVGYHIFEVRKRLEPVLYRFLGVDTP
Specific function: Unknown
COG id: COG1549
COG function: function code J; Queuine tRNA-ribosyltransferases, contain PUA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26658; Mature: 26527
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEAAVEYSLQHQPSISLTARPSRISFRKDSEGRFLPRHEAPLDPQLVGPQAFKHPAVAK CCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHH WWTWLREEYTPQSSVAIVTPCSNVKPYTKSPVSRRIRGLLRRLGLWDSKANKPRGIEWLY HHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE FSDLLVLVPYEKAEEYPACCYEVPPEIVLENPKLHSLVTDILAKVMFNLTARGLREVVVF ECCEEEEECCHHHCCCCCHHHCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPRKHMRLWDEARRKSSRWPKEILVGYHIFEVRKRLEPVLYRFLGVDTP HCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AEAAVEYSLQHQPSISLTARPSRISFRKDSEGRFLPRHEAPLDPQLVGPQAFKHPAVAK CCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHH WWTWLREEYTPQSSVAIVTPCSNVKPYTKSPVSRRIRGLLRRLGLWDSKANKPRGIEWLY HHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE FSDLLVLVPYEKAEEYPACCYEVPPEIVLENPKLHSLVTDILAKVMFNLTARGLREVVVF ECCEEEEECCHHHCCCCCHHHCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPRKHMRLWDEARRKSSRWPKEILVGYHIFEVRKRLEPVLYRFLGVDTP HCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA