Click here to switch to the map view.

The map label for this gene is cstA [H]

Identifier: 124027687

GI number: 124027687

Start: 803375

End: 805192

Strand: Reverse

Name: cstA [H]

Synonym: Hbut_0809

Alternate gene names: 124027687

Gene position: 805192-803375 (Counterclockwise)

Preceding gene: 124027688

Following gene: 124027686

Centisome position: 48.3

GC content: 51.98

Gene sequence:

>1818_bases
GTGGCGCTCGCAACCGCAGGTATTACAGCCTCAATAATCATCGTAATTTACGTTCTAGCCTACGTATTCTACGGTAAAAA
GCTCCTAGAGCAGAAGGTTGTAAGGGCTGATCCTACGAGGAAGACGCCAGCACTTGCCAAGTTTGACGGTGTAGATTATG
TGCCGGCGAACAAGTATGTGCTCTACGGTCATCACTTTGCCAGTATCGCCGGCGCAGGCCCCATAGTAGGACCAGCCATA
GCGATGGCCTATGGCTGGCTACTGCCAATAATATGGGTTCTCTTTGGCAACGTGTTCATCGGCGCTGTCCACGACTACCT
AGCATTGATGGCTAGCGTGAGGCACGGCGGAGTATCGATAATGTCGGTCTCCGAGAACGTTATGGGCCGCAAGGCTAGGT
ATATCTTCCTAGCATACGTCTATGCAGCGCTAATCCTAGTCATAGGAGCCTTCCTAAGCGTTGCAGCAAAGGTACTTGCT
GGAACACCTGAGGCAGCCACGGTAGCCATGATATACATGCCGCTGGCAGTGATGCTGGGCATACTCATGTATAGGACGGG
ACTGGGCACCGTTAAGAGTACTGCAATAATAGCACTAATCCTGGTGCTCGGCATAGCGTATGCAATGAAGTATCCATTCT
ATCTGCCGACGATAAGCTTCCTGGGCTTCACCATAGACTCCTACCACTTCTGGGTAATCCTCCTAGCAGCCTATGCCTTT
GTAGCTAGCGTGCTGCCGGTCTGGTACCTACTACAGCCACGCGACTACCTCAACGCCTACCTGCTATGGAGCTTCGTAAT
CATAAGCTTGATAGGAGTCCTAGGCGTATTCACCTACAAGTTCAGCGCTCCAGCATACACCAGCTTTGCTCCCAAAATCT
TCGTGGGAGTAGAGACGCCATTCTGGCCAGCAATAGTCTTGATAATCGCTTGTGGCGCTCTAAGCGGCTTCCACAGTGTC
GTGGCGAGCGGTACTACGAGCAAGCAGCTAGCAAACGAGCTTGATGCGCTACTAGTGGGTTATGGTGGCATGCTAACTGA
AGGTGCTGTTTCAAGCTTTGCAGTTATCATCCCGATAGCGTTGGCATGGAGTCAGCCAGACTTCCCCAAGCTGCTAGAGG
CGGCAGGCAAGGCTAACCTCATACCGGACTACCAGGAGGGTGGCATACTAGCTCTCGATAAGGTTCAGAGGTTCATCTAT
GGCTACGGCTACATGGTTGGTAAGGCGTTCGGCAGCCTAGACACTGTCGGCAAGGTGATGGCAAGTTTTGCGGCAGTAGC
TCTAGCATCATTCATTCTAACAACGCTTGACACTGCAACAAGGCTTGCCAGGTTCGCGTGGCAGGAGATGTTCGACTGGC
TAGAGGAGAGGAGCCGCTCAGCATACAAGCTTATCGCTAACAGGTATTCGGCAAGCTTCATAGCAGCAGCTATAGGCTTC
GTGCTAGCCTATCCATACGTAATGATTGGTGGCAAGTTACAGCCAGCATATAACATCATATGGCCTGCCTTCGCTGGCAC
CAACCAGCTACTAGCAGCACTAGCACTACTAACCAGCGCCCTGTGGGTATACGCCATACTCAAGGTGCGTGGCAAAGTCA
CCTGGCTAATACAAGTGCCAGCATGGTTCCTATGGATAACAGTGACGGTAGCTCTGTTCTGGTGGCTGGTATACGTTGCG
CCAAAGTACCCGCCGATACAGAAGTACGGCGCAGGCAGCATCGTTGCGATATCGCTCGCGCTAGATCTAGTGCTATTATA
CCTCTTCGTCCGCGGACTGCAAATGATTAAGAAGCAAGCAGGAACCCAGCCAGCATGA

Upstream 100 bases:

>100_bases
ATAATCGGCTGGTTTAGCCTCCTCATAGGCCCAGCACTAGCCTTTGGTACTGCTCCAGCCAGTATAGGGAAGAGGCTTCA
GGCTGAGAGGTGAGGTGACC

Downstream 100 bases:

>100_bases
GAGAAGGAACTTCTGTAAGACACTCTCCCACACGGTTTTTTCGAGGTCTCAACCCTCTCATACTTTCAACATTCTCTGCC
TCTCCCAGCGATAGTATTTT

Product: carbon starvation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 605; Mature: 604

Protein sequence:

>605_residues
MALATAGITASIIIVIYVLAYVFYGKKLLEQKVVRADPTRKTPALAKFDGVDYVPANKYVLYGHHFASIAGAGPIVGPAI
AMAYGWLLPIIWVLFGNVFIGAVHDYLALMASVRHGGVSIMSVSENVMGRKARYIFLAYVYAALILVIGAFLSVAAKVLA
GTPEAATVAMIYMPLAVMLGILMYRTGLGTVKSTAIIALILVLGIAYAMKYPFYLPTISFLGFTIDSYHFWVILLAAYAF
VASVLPVWYLLQPRDYLNAYLLWSFVIISLIGVLGVFTYKFSAPAYTSFAPKIFVGVETPFWPAIVLIIACGALSGFHSV
VASGTTSKQLANELDALLVGYGGMLTEGAVSSFAVIIPIALAWSQPDFPKLLEAAGKANLIPDYQEGGILALDKVQRFIY
GYGYMVGKAFGSLDTVGKVMASFAAVALASFILTTLDTATRLARFAWQEMFDWLEERSRSAYKLIANRYSASFIAAAIGF
VLAYPYVMIGGKLQPAYNIIWPAFAGTNQLLAALALLTSALWVYAILKVRGKVTWLIQVPAWFLWITVTVALFWWLVYVA
PKYPPIQKYGAGSIVAISLALDLVLLYLFVRGLQMIKKQAGTQPA

Sequences:

>Translated_605_residues
MALATAGITASIIIVIYVLAYVFYGKKLLEQKVVRADPTRKTPALAKFDGVDYVPANKYVLYGHHFASIAGAGPIVGPAI
AMAYGWLLPIIWVLFGNVFIGAVHDYLALMASVRHGGVSIMSVSENVMGRKARYIFLAYVYAALILVIGAFLSVAAKVLA
GTPEAATVAMIYMPLAVMLGILMYRTGLGTVKSTAIIALILVLGIAYAMKYPFYLPTISFLGFTIDSYHFWVILLAAYAF
VASVLPVWYLLQPRDYLNAYLLWSFVIISLIGVLGVFTYKFSAPAYTSFAPKIFVGVETPFWPAIVLIIACGALSGFHSV
VASGTTSKQLANELDALLVGYGGMLTEGAVSSFAVIIPIALAWSQPDFPKLLEAAGKANLIPDYQEGGILALDKVQRFIY
GYGYMVGKAFGSLDTVGKVMASFAAVALASFILTTLDTATRLARFAWQEMFDWLEERSRSAYKLIANRYSASFIAAAIGF
VLAYPYVMIGGKLQPAYNIIWPAFAGTNQLLAALALLTSALWVYAILKVRGKVTWLIQVPAWFLWITVTVALFWWLVYVA
PKYPPIQKYGAGSIVAISLALDLVLLYLFVRGLQMIKKQAGTQPA
>Mature_604_residues
ALATAGITASIIIVIYVLAYVFYGKKLLEQKVVRADPTRKTPALAKFDGVDYVPANKYVLYGHHFASIAGAGPIVGPAIA
MAYGWLLPIIWVLFGNVFIGAVHDYLALMASVRHGGVSIMSVSENVMGRKARYIFLAYVYAALILVIGAFLSVAAKVLAG
TPEAATVAMIYMPLAVMLGILMYRTGLGTVKSTAIIALILVLGIAYAMKYPFYLPTISFLGFTIDSYHFWVILLAAYAFV
ASVLPVWYLLQPRDYLNAYLLWSFVIISLIGVLGVFTYKFSAPAYTSFAPKIFVGVETPFWPAIVLIIACGALSGFHSVV
ASGTTSKQLANELDALLVGYGGMLTEGAVSSFAVIIPIALAWSQPDFPKLLEAAGKANLIPDYQEGGILALDKVQRFIYG
YGYMVGKAFGSLDTVGKVMASFAAVALASFILTTLDTATRLARFAWQEMFDWLEERSRSAYKLIANRYSASFIAAAIGFV
LAYPYVMIGGKLQPAYNIIWPAFAGTNQLLAALALLTSALWVYAILKVRGKVTWLIQVPAWFLWITVTVALFWWLVYVAP
KYPPIQKYGAGSIVAISLALDLVLLYLFVRGLQMIKKQAGTQPA

Specific function: Peptide utilization during carbon starvation [H]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=577, Percent_Identity=33.1022530329289, Blast_Score=256, Evalue=3e-69,
Organism=Escherichia coli, GI87082431, Length=605, Percent_Identity=31.7355371900826, Blast_Score=233, Evalue=4e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 65790; Mature: 65659

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALATAGITASIIIVIYVLAYVFYGKKLLEQKVVRADPTRKTPALAKFDGVDYVPANKYV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEE
LYGHHFASIAGAGPIVGPAIAMAYGWLLPIIWVLFGNVFIGAVHDYLALMASVRHGGVSI
EECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
MSVSENVMGRKARYIFLAYVYAALILVIGAFLSVAAKVLAGTPEAATVAMIYMPLAVMLG
EEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ILMYRTGLGTVKSTAIIALILVLGIAYAMKYPFYLPTISFLGFTIDSYHFWVILLAAYAF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VASVLPVWYLLQPRDYLNAYLLWSFVIISLIGVLGVFTYKFSAPAYTSFAPKIFVGVETP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC
FWPAIVLIIACGALSGFHSVVASGTTSKQLANELDALLVGYGGMLTEGAVSSFAVIIPIA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LAWSQPDFPKLLEAAGKANLIPDYQEGGILALDKVQRFIYGYGYMVGKAFGSLDTVGKVM
HHCCCCCHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ASFAAVALASFILTTLDTATRLARFAWQEMFDWLEERSRSAYKLIANRYSASFIAAAIGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAYPYVMIGGKLQPAYNIIWPAFAGTNQLLAALALLTSALWVYAILKVRGKVTWLIQVP
HHHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHH
AWFLWITVTVALFWWLVYVAPKYPPIQKYGAGSIVAISLALDLVLLYLFVRGLQMIKKQA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTQPA
CCCCC
>Mature Secondary Structure 
ALATAGITASIIIVIYVLAYVFYGKKLLEQKVVRADPTRKTPALAKFDGVDYVPANKYV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEE
LYGHHFASIAGAGPIVGPAIAMAYGWLLPIIWVLFGNVFIGAVHDYLALMASVRHGGVSI
EECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
MSVSENVMGRKARYIFLAYVYAALILVIGAFLSVAAKVLAGTPEAATVAMIYMPLAVMLG
EEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ILMYRTGLGTVKSTAIIALILVLGIAYAMKYPFYLPTISFLGFTIDSYHFWVILLAAYAF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VASVLPVWYLLQPRDYLNAYLLWSFVIISLIGVLGVFTYKFSAPAYTSFAPKIFVGVETP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC
FWPAIVLIIACGALSGFHSVVASGTTSKQLANELDALLVGYGGMLTEGAVSSFAVIIPIA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LAWSQPDFPKLLEAAGKANLIPDYQEGGILALDKVQRFIYGYGYMVGKAFGSLDTVGKVM
HHCCCCCHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ASFAAVALASFILTTLDTATRLARFAWQEMFDWLEERSRSAYKLIANRYSASFIAAAIGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAYPYVMIGGKLQPAYNIIWPAFAGTNQLLAALALLTSALWVYAILKVRGKVTWLIQVP
HHHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHH
AWFLWITVTVALFWWLVYVAPKYPPIQKYGAGSIVAISLALDLVLLYLFVRGLQMIKKQA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTQPA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848300; 9278503; 2521622 [H]