Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
---|---|
Accession | NC_008818 |
Length | 1,667,163 |
Click here to switch to the map view.
The map label for this gene is 124027675
Identifier: 124027675
GI number: 124027675
Start: 791855
End: 792715
Strand: Direct
Name: 124027675
Synonym: Hbut_0797
Alternate gene names: NA
Gene position: 791855-792715 (Clockwise)
Preceding gene: 124027674
Following gene: 124027677
Centisome position: 47.5
GC content: 51.45
Gene sequence:
>861_bases GTGTCTGCGATTATTTCACGCTTACTAGGCTTCCTCGGTGTTGGTGAGCACAAGCAGCCAAGCCTCAAGGAGAGGATAGA CCATGCGATAGTAAAGCTTGAGCTGCTAGAGGACCGCGTAGCAGAGCTTCGCTACAGGTTTGAGAAGAGGAGCCGCGAAC TCTTCGAGAAGGTTGTAGTACTGCTTAGGCGCGGGGAGAAGAGCCGCGCAGCAATCTACGCTGGCGAGGTTAGCCAGGTA CGCAACATACTCAAAATGGTAGTCACAGTAGAAAACCTCATCATCATGACCAAGGAGAGGCTGAAGACTGTGAGAGACGT GAGAGAGCTAGGCCAGACCCTCATGGTGTTCGGTGCAGCACTGGAAGAGGTTAAGGACCAGATAACAAGCATCTACCCCA ACCTCAACCTAGCATTTGAGGAGATAACCAGAACCGTTAAGAACATGATAGTCGAGACAAGCATGGACATAGTGGGCGAG GTTGACCCGGCAATAATATCCCACGACGCGCTAAAGGTACTAGATGAAGCAATGAGGATGGCCGAGGAGAGGATAAAGAG CGAGTTCCCAGAGCCCCCCGTGGAGCCCATCATACACCTCGAGACGAGAAAGCAACCAAAGAAGACACCAGTGCCAGTAG CCGTGCCAGCAGCACCCAGCTCCACGAGATCTGTGATGCCACAAGTTGCTATAGCCAGGCGCGAGCAGCAAAATCTTGAG GAGCTAGTACTAAACTATATCAGAGAACACAACGGCTACCTAGACCTCAAAGACTTTACAACACGCTACGGCGTAGCAAG GGATGAAGTGCTACGTGCACTATACAAGCTCGCAGAGAAAGGCCTCATAAAACTCTCCTAA
Upstream 100 bases:
>100_bases TACCGGGTAATAGCGGGGGCGAGGGGCTAGCACTACGACCCATGCATACATTCTTGCATCGGGAGACCACCACAAACCCG GTAGCAAGGGTGATGTGAAA
Downstream 100 bases:
>100_bases AACCCATAGGCTATCGGGGCTCATGCTAGAGTTTTTCAAGCTCCTCGAGTATATCCTCCGTGAGTCTCCACCCAAGTGCC CCAAGTATTTCTCTCAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSAIISRLLGFLGVGEHKQPSLKERIDHAIVKLELLEDRVAELRYRFEKRSRELFEKVVVLLRRGEKSRAAIYAGEVSQV RNILKMVVTVENLIIMTKERLKTVRDVRELGQTLMVFGAALEEVKDQITSIYPNLNLAFEEITRTVKNMIVETSMDIVGE VDPAIISHDALKVLDEAMRMAEERIKSEFPEPPVEPIIHLETRKQPKKTPVPVAVPAAPSSTRSVMPQVAIARREQQNLE ELVLNYIREHNGYLDLKDFTTRYGVARDEVLRALYKLAEKGLIKLS
Sequences:
>Translated_286_residues MSAIISRLLGFLGVGEHKQPSLKERIDHAIVKLELLEDRVAELRYRFEKRSRELFEKVVVLLRRGEKSRAAIYAGEVSQV RNILKMVVTVENLIIMTKERLKTVRDVRELGQTLMVFGAALEEVKDQITSIYPNLNLAFEEITRTVKNMIVETSMDIVGE VDPAIISHDALKVLDEAMRMAEERIKSEFPEPPVEPIIHLETRKQPKKTPVPVAVPAAPSSTRSVMPQVAIARREQQNLE ELVLNYIREHNGYLDLKDFTTRYGVARDEVLRALYKLAEKGLIKLS >Mature_285_residues SAIISRLLGFLGVGEHKQPSLKERIDHAIVKLELLEDRVAELRYRFEKRSRELFEKVVVLLRRGEKSRAAIYAGEVSQVR NILKMVVTVENLIIMTKERLKTVRDVRELGQTLMVFGAALEEVKDQITSIYPNLNLAFEEITRTVKNMIVETSMDIVGEV DPAIISHDALKVLDEAMRMAEERIKSEFPEPPVEPIIHLETRKQPKKTPVPVAVPAAPSSTRSVMPQVAIARREQQNLEE LVLNYIREHNGYLDLKDFTTRYGVARDEVLRALYKLAEKGLIKLS
Specific function: Unknown
COG id: COG5491
COG function: function code N; Conserved protein implicated in secretion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32650; Mature: 32518
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIISRLLGFLGVGEHKQPSLKERIDHAIVKLELLEDRVAELRYRFEKRSRELFEKVVV CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRRGEKSRAAIYAGEVSQVRNILKMVVTVENLIIMTKERLKTVRDVRELGQTLMVFGAA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEEVKDQITSIYPNLNLAFEEITRTVKNMIVETSMDIVGEVDPAIISHDALKVLDEAMRM HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AEERIKSEFPEPPVEPIIHLETRKQPKKTPVPVAVPAAPSSTRSVMPQVAIARREQQNLE HHHHHHHCCCCCCCCHHEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH ELVLNYIREHNGYLDLKDFTTRYGVARDEVLRALYKLAEKGLIKLS HHHHHHHHHCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SAIISRLLGFLGVGEHKQPSLKERIDHAIVKLELLEDRVAELRYRFEKRSRELFEKVVV HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRRGEKSRAAIYAGEVSQVRNILKMVVTVENLIIMTKERLKTVRDVRELGQTLMVFGAA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEEVKDQITSIYPNLNLAFEEITRTVKNMIVETSMDIVGEVDPAIISHDALKVLDEAMRM HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AEERIKSEFPEPPVEPIIHLETRKQPKKTPVPVAVPAAPSSTRSVMPQVAIARREQQNLE HHHHHHHCCCCCCCCHHEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH ELVLNYIREHNGYLDLKDFTTRYGVARDEVLRALYKLAEKGLIKLS HHHHHHHHHCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA