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The map label for this gene is 124027590

Identifier: 124027590

GI number: 124027590

Start: 691718

End: 692740

Strand: Direct

Name: 124027590

Synonym: Hbut_0710

Alternate gene names: NA

Gene position: 691718-692740 (Clockwise)

Preceding gene: 124027587

Following gene: 124027591

Centisome position: 41.49

GC content: 53.96

Gene sequence:

>1023_bases
ATGGCGCAACAGGCTGGTAATGGTAGGCCTCTGGCTGGCTTCCTGGTTTTGGGCTATGCTGTGACACCCCTGCATCCCGG
CGTGGGCAGGGCTCCCGGTGCTGTCGACCTTCCAGTCCAGCGTGACCCCATGGGCTACCCTATGGTTTACGCTTCAAGTG
TTAAGGGCGCGTTGAAGGCTGAGTGTGCTAAGCAGGCTGGCGACAAATGCTTCGACGATAGGGGCAGGATAAAATGTAAT
GATAAGGATGAGGACTGCGCACTGTGCTGCTGCCTCTTCGGCCACGAGCCTGAGGCGGCGGAGGCCGCATCCTCCGTCCT
GAGCGTGCTTGACCTAGTGCCGCTCTTCTTCCCGGTGCCCAGCCTGAGCCACGGCTACCTCTATATTACGACACCTTACC
TGGCGAGACGCGCATACTCAGTTATGGAGGCTATAGGCACTAGTGGAGAGTACAACAAGCTCATGAAACTGCTTGAGAAC
ATTGCTAAGCAGGAGCTGGGGGAGGGCGAGGCTGCAGGCTGTGTAGATGATAGGAAAGTCTATGTTGGCACTGACGAACT
GAACGTAAAGAAAAAGCTAGGCAACTGCGAAGACCTATCTTTTGTAGCCAAGCTTGGAGGCCTGGCGGGCGACATACAGT
CCAGGATGATCGTCGTCTCTGACGCTGTAGGCCCACTCTACGTTGAGAAGGGCCTCATTAGGGTTACGAGGGTGCGGCTG
AGACTCGACACCAAAACCGTTGCCGAGGGCGGGCTGTGGACTGAAGAGTACATACCGCAGGGCACAATATTCCTCAGCGG
CTTCATAGCAGCACTACCAAAGAAGAACACCTACTGCAAACATGTTAACGGTATTGAAAGCGGTGTGATTAAGGATAGTG
GAGATCTTAAGAATCTCATTACGAAGCTTGCCGAAAAGCTGAAGAAAACAAACAACGTTTTCTACGCGATAATAGGGGGC
AAGGAGACCGTAGGACGGGGCCTCATAAAGTTCACCATAGCTCTACCTCAGGGCCAACAGTAA

Upstream 100 bases:

>100_bases
TAAATTGTTAAGTAAAGGTTAAAACTTGCCGCCTCGGCAACCCACTCCTGGCACTCTGCCTAATACCCCCTTCCTCTCTA
CGAGCGAGGGCTGAATGTGA

Downstream 100 bases:

>100_bases
GGCCGCTAAGGCGGGGTGACGGTGTTGAGCCGTAACATACTGCCCAACGACCCGGTTGAAGCCGCGCTTGAAGCCATGAG
AAGGTTTGACAAGAACCTCC

Product: RAMP superfamily DNA repair protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Protein Cmr4 Family; Cmr4 Family CRISPR-Associated RAMP Protein; RAMP Superfamily DNA Repair Protein

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MAQQAGNGRPLAGFLVLGYAVTPLHPGVGRAPGAVDLPVQRDPMGYPMVYASSVKGALKAECAKQAGDKCFDDRGRIKCN
DKDEDCALCCCLFGHEPEAAEAASSVLSVLDLVPLFFPVPSLSHGYLYITTPYLARRAYSVMEAIGTSGEYNKLMKLLEN
IAKQELGEGEAAGCVDDRKVYVGTDELNVKKKLGNCEDLSFVAKLGGLAGDIQSRMIVVSDAVGPLYVEKGLIRVTRVRL
RLDTKTVAEGGLWTEEYIPQGTIFLSGFIAALPKKNTYCKHVNGIESGVIKDSGDLKNLITKLAEKLKKTNNVFYAIIGG
KETVGRGLIKFTIALPQGQQ

Sequences:

>Translated_340_residues
MAQQAGNGRPLAGFLVLGYAVTPLHPGVGRAPGAVDLPVQRDPMGYPMVYASSVKGALKAECAKQAGDKCFDDRGRIKCN
DKDEDCALCCCLFGHEPEAAEAASSVLSVLDLVPLFFPVPSLSHGYLYITTPYLARRAYSVMEAIGTSGEYNKLMKLLEN
IAKQELGEGEAAGCVDDRKVYVGTDELNVKKKLGNCEDLSFVAKLGGLAGDIQSRMIVVSDAVGPLYVEKGLIRVTRVRL
RLDTKTVAEGGLWTEEYIPQGTIFLSGFIAALPKKNTYCKHVNGIESGVIKDSGDLKNLITKLAEKLKKTNNVFYAIIGG
KETVGRGLIKFTIALPQGQQ
>Mature_339_residues
AQQAGNGRPLAGFLVLGYAVTPLHPGVGRAPGAVDLPVQRDPMGYPMVYASSVKGALKAECAKQAGDKCFDDRGRIKCND
KDEDCALCCCLFGHEPEAAEAASSVLSVLDLVPLFFPVPSLSHGYLYITTPYLARRAYSVMEAIGTSGEYNKLMKLLENI
AKQELGEGEAAGCVDDRKVYVGTDELNVKKKLGNCEDLSFVAKLGGLAGDIQSRMIVVSDAVGPLYVEKGLIRVTRVRLR
LDTKTVAEGGLWTEEYIPQGTIFLSGFIAALPKKNTYCKHVNGIESGVIKDSGDLKNLITKLAEKLKKTNNVFYAIIGGK
ETVGRGLIKFTIALPQGQQ

Specific function: Unknown

COG id: COG1336

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36580; Mature: 36449

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQQAGNGRPLAGFLVLGYAVTPLHPGVGRAPGAVDLPVQRDPMGYPMVYASSVKGALKA
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCEEEHHHHCHHHHH
ECAKQAGDKCFDDRGRIKCNDKDEDCALCCCLFGHEPEAAEAASSVLSVLDLVPLFFPVP
HHHHHCCCCCCCCCCCEEECCCCCHHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
SLSHGYLYITTPYLARRAYSVMEAIGTSGEYNKLMKLLENIAKQELGEGEAAGCVDDRKV
CCCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
YVGTDELNVKKKLGNCEDLSFVAKLGGLAGDIQSRMIVVSDAVGPLYVEKGLIRVTRVRL
EECCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHCCEEEEECCCCHHHHHHHHHEEEHEEE
RLDTKTVAEGGLWTEEYIPQGTIFLSGFIAALPKKNTYCKHVNGIESGVIKDSGDLKNLI
EECHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHH
TKLAEKLKKTNNVFYAIIGGKETVGRGLIKFTIALPQGQQ
HHHHHHHHHCCCEEEEEECCCHHHCCCEEEEEEECCCCCC
>Mature Secondary Structure 
AQQAGNGRPLAGFLVLGYAVTPLHPGVGRAPGAVDLPVQRDPMGYPMVYASSVKGALKA
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCEEEHHHHCHHHHH
ECAKQAGDKCFDDRGRIKCNDKDEDCALCCCLFGHEPEAAEAASSVLSVLDLVPLFFPVP
HHHHHCCCCCCCCCCCEEECCCCCHHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
SLSHGYLYITTPYLARRAYSVMEAIGTSGEYNKLMKLLENIAKQELGEGEAAGCVDDRKV
CCCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
YVGTDELNVKKKLGNCEDLSFVAKLGGLAGDIQSRMIVVSDAVGPLYVEKGLIRVTRVRL
EECCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHCCEEEEECCCCHHHHHHHHHEEEHEEE
RLDTKTVAEGGLWTEEYIPQGTIFLSGFIAALPKKNTYCKHVNGIESGVIKDSGDLKNLI
EECHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHH
TKLAEKLKKTNNVFYAIIGGKETVGRGLIKFTIALPQGQQ
HHHHHHHHHCCCEEEEEECCCHHHCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA