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The map label for this gene is yckA [H]

Identifier: 124027569

GI number: 124027569

Start: 670004

End: 670705

Strand: Direct

Name: yckA [H]

Synonym: Hbut_0688

Alternate gene names: 124027569

Gene position: 670004-670705 (Clockwise)

Preceding gene: 124027568

Following gene: 124027574

Centisome position: 40.19

GC content: 56.27

Gene sequence:

>702_bases
TTGGAGCTGCTGCAACGTATAGCAGAGCTGCTCTCGGAGCCCCGCTATGTGAGCCTACTCGCCGAAGGCATACGGAACAC
GCTCATACTCACAGCAGCCTCCTTCACTATGGGCTTCGCACTCGGAACCCTCATAGCGATTGGTAGGCTCTACGGCCCCA
GGCCCCTCCGCTGGCTCCTAGCCGGCTACGTCGAGCTGATACGTGGCACGCCAATGCTGCTCCAGCTCTTCATACTATAC
TACGCGCTCCCCCAGGCCGGGATAAGCCTTGCCGCCATGACAGCCGCTATACTCGGCATGGGCCTCAACAGCGCAGCATA
CCAGTCCGAGTATCTCCGTGCCTCCCTACGCGCAGTCCACACGGGACAGTGGGAAGCAGCCCTAGCCCTAGGCATGACCA
GGTGGCAAGCAATAACCAGCATCATACTCCCAATAGGGCTCCGCACAGCAATACCAGCACTAACCAACGAGCTAGTATAC
CTCCTCAAATATTCCTCAATAGCCTACTTCCTAGCAGTGGTAGAGCTCGTCTACGCTGGCAAGATAATAGGCTCGGAGAC
CTTCGCCTACCTCGAAGTCTACACGATCATAGCACTAGTCTACCTAGCATTCTCCCTAGCAATAACAAGGACCATGAAAC
GGCTCGAAAAGAAGGTCGCCATACCAGGCCTAGCTGTTAGCGCGGCTGAGAGGCTGCAATAA

Upstream 100 bases:

>100_bases
CATAGTTGAGAGGGGGAGCCCAGAGGAGATACTGAGAAACCCCAAGCACGAGCGTACAAGGCGCTTCATCGAGAGGATTG
CCAGGAGGAGGCACTAGGCC

Downstream 100 bases:

>100_bases
GCTCCACCCGGCTTGACAAGACTTGGCAATCCCAACATACTGCTTATCGGTGCCTACCCAGCCTCCCGGGGGTATCTTTC
CATGTTTGATACATGCATCC

Product: glutamine transport system permease protein glnP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MELLQRIAELLSEPRYVSLLAEGIRNTLILTAASFTMGFALGTLIAIGRLYGPRPLRWLLAGYVELIRGTPMLLQLFILY
YALPQAGISLAAMTAAILGMGLNSAAYQSEYLRASLRAVHTGQWEAALALGMTRWQAITSIILPIGLRTAIPALTNELVY
LLKYSSIAYFLAVVELVYAGKIIGSETFAYLEVYTIIALVYLAFSLAITRTMKRLEKKVAIPGLAVSAAERLQ

Sequences:

>Translated_233_residues
MELLQRIAELLSEPRYVSLLAEGIRNTLILTAASFTMGFALGTLIAIGRLYGPRPLRWLLAGYVELIRGTPMLLQLFILY
YALPQAGISLAAMTAAILGMGLNSAAYQSEYLRASLRAVHTGQWEAALALGMTRWQAITSIILPIGLRTAIPALTNELVY
LLKYSSIAYFLAVVELVYAGKIIGSETFAYLEVYTIIALVYLAFSLAITRTMKRLEKKVAIPGLAVSAAERLQ
>Mature_233_residues
MELLQRIAELLSEPRYVSLLAEGIRNTLILTAASFTMGFALGTLIAIGRLYGPRPLRWLLAGYVELIRGTPMLLQLFILY
YALPQAGISLAAMTAAILGMGLNSAAYQSEYLRASLRAVHTGQWEAALALGMTRWQAITSIILPIGLRTAIPALTNELVY
LLKYSSIAYFLAVVELVYAGKIIGSETFAYLEVYTIIALVYLAFSLAITRTMKRLEKKVAIPGLAVSAAERLQ

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=201, Percent_Identity=37.3134328358209, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1787030, Length=207, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1786873, Length=209, Percent_Identity=29.6650717703349, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1786874, Length=222, Percent_Identity=31.0810810810811, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787086, Length=215, Percent_Identity=28.8372093023256, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1788645, Length=206, Percent_Identity=28.1553398058252, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI1788646, Length=217, Percent_Identity=27.1889400921659, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI87082239, Length=203, Percent_Identity=30.0492610837438, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787087, Length=221, Percent_Identity=25.3393665158371, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI48994930, Length=169, Percent_Identity=30.7692307692308, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25520; Mature: 25520

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLQRIAELLSEPRYVSLLAEGIRNTLILTAASFTMGFALGTLIAIGRLYGPRPLRWLL
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AGYVELIRGTPMLLQLFILYYALPQAGISLAAMTAAILGMGLNSAAYQSEYLRASLRAVH
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TGQWEAALALGMTRWQAITSIILPIGLRTAIPALTNELVYLLKYSSIAYFLAVVELVYAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIIGSETFAYLEVYTIIALVYLAFSLAITRTMKRLEKKVAIPGLAVSAAERLQ
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MELLQRIAELLSEPRYVSLLAEGIRNTLILTAASFTMGFALGTLIAIGRLYGPRPLRWLL
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AGYVELIRGTPMLLQLFILYYALPQAGISLAAMTAAILGMGLNSAAYQSEYLRASLRAVH
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TGQWEAALALGMTRWQAITSIILPIGLRTAIPALTNELVYLLKYSSIAYFLAVVELVYAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIIGSETFAYLEVYTIIALVYLAFSLAITRTMKRLEKKVAIPGLAVSAAERLQ
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704255; 8969502; 9384377 [H]