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The map label for this gene is vorD [H]

Identifier: 124027549

GI number: 124027549

Start: 651607

End: 651951

Strand: Direct

Name: vorD [H]

Synonym: Hbut_0668

Alternate gene names: 124027549

Gene position: 651607-651951 (Clockwise)

Preceding gene: 124027548

Following gene: 124027550

Centisome position: 39.08

GC content: 54.49

Gene sequence:

>345_bases
TTGAGCGGGATGGAGAGGTATCTCGGCCGGAAGTACCCGCAGGGCTATGAGGACATACCCTTAGCAGCTATTGTGCCCTG
GCCAGGCAATACTGCGGAGCTGCCGAAGCACGAGTGGAGGACCTTCAGGCCGGTAATCAACCAGGATAAGTGTGTGAGGT
GCAGGCTCTGCTGGACATACTGCCCAGACGGCGCTATAGTCGAACTCGACAAGGAGTATGTTACAAGCACGGGCCGGAAG
TACAAGATAACATTCGAGGTGAACTACGACTACTGTAAGGGCTGTGGTATTTGTGCCAACGAGTGTCCCGTAAAGGCTAT
TGAGATGGTTCCGGAGGAGAGGTGA

Upstream 100 bases:

>100_bases
TCGAGAAGGTTAGGGAGACGTTTGGCGAGAGACCCCACGTTATTGAACCCAATATCCGGGCCATAGAGGAGGCCTACAAC
TCGACCCAGGTGATATGTAG

Downstream 100 bases:

>100_bases
GGAGGCCGTGGCCTCGGCGGTTGAGACTAAGCCCGTGGAGAAGGAGCTCGGGAAGCCTCACGAACGCATAGCCGCCACGG
GAGGCGAGGCTGCAGCCTAC

Product: pyruvate synthase subunit porD

Products: NA

Alternate protein names: VOR; 2-oxoisovalerate ferredoxin reductase subunit delta; 2-oxoisovalerate oxidoreductase delta chain [H]

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSGMERYLGRKYPQGYEDIPLAAIVPWPGNTAELPKHEWRTFRPVINQDKCVRCRLCWTYCPDGAIVELDKEYVTSTGRK
YKITFEVNYDYCKGCGICANECPVKAIEMVPEER

Sequences:

>Translated_114_residues
MSGMERYLGRKYPQGYEDIPLAAIVPWPGNTAELPKHEWRTFRPVINQDKCVRCRLCWTYCPDGAIVELDKEYVTSTGRK
YKITFEVNYDYCKGCGICANECPVKAIEMVPEER
>Mature_113_residues
SGMERYLGRKYPQGYEDIPLAAIVPWPGNTAELPKHEWRTFRPVINQDKCVRCRLCWTYCPDGAIVELDKEYVTSTGRKY
KITFEVNYDYCKGCGICANECPVKAIEMVPEER

Specific function: Ndh-1 Shuttles Electrons From NADH, Via Fmn And Iron- Sulfur (Fe-S) Centers, To Quinones In The Respiratory Chain. The Immediate Electron Acceptor For The Enzyme In This Species Is Believed To Be Ubiquinone. Couples The Redox Reaction To Proton Translocat

COG id: COG1144

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011898 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: =1.2.7.7 [H]

Molecular weight: Translated: 13204; Mature: 13073

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
7.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGMERYLGRKYPQGYEDIPLAAIVPWPGNTAELPKHEWRTFRPVINQDKCVRCRLCWTY
CCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEEEEE
CPDGAIVELDKEYVTSTGRKYKITFEVNYDYCKGCGICANECPVKAIEMVPEER
CCCCCEEEECHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure 
SGMERYLGRKYPQGYEDIPLAAIVPWPGNTAELPKHEWRTFRPVINQDKCVRCRLCWTY
CCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEEEEE
CPDGAIVELDKEYVTSTGRKYKITFEVNYDYCKGCGICANECPVKAIEMVPEER
CCCCCEEEECHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8550425 [H]